Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13255

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,936,617	+		AO353_13240	0.85	+3.6
2,936,617	+		AO353_13240	0.85	-1.0
2,936,617	+		AO353_13240	0.85	-0.1
2,936,632	+		AO353_13240	0.87	+0.2
2,936,633	-		AO353_13240	0.87	-0.6
2,936,633	-		AO353_13240	0.87	+0.9
2,936,633	-		AO353_13240	0.87	-0.1
2,936,633	-		AO353_13240	0.87	-1.7
2,936,656	+		AO353_13240	0.89	-1.5
2,936,657	-		AO353_13240	0.89	+0.7
2,936,657	-		AO353_13240	0.89	-1.9
2,936,699	+				-0.2
2,936,700	-				-1.4
2,936,700	-				-0.8
2,936,700	-				+0.9
2,936,700	-				+0.2
2,936,700	-				+2.7
2,936,701	+				+2.2
2,936,702	-				-0.8
2,936,702	-				-1.1
2,936,702	-				-0.4
2,936,712	+				-1.1
2,936,713	-				-0.4
2,936,713	-				-0.1
2,936,735	+				-1.1
2,936,735	+				-0.1
2,936,735	+				-0.8
2,936,735	+				+2.6
2,936,735	+				-1.1
2,936,735	+				-0.9
2,936,735	+				+0.2
2,936,736	-				-1.2
2,936,736	-				-0.8
2,936,736	-				-0.8
2,936,736	-				-0.1
2,936,736	-				+3.4
2,936,736	-				-0.6
2,936,736	-				-1.1
2,936,736	-				+1.8
2,936,736	-				-0.1
2,936,736	-				-1.2
2,936,736	-				-1.3
2,936,736	-				+1.9
2,936,736	-				-1.5
2,936,736	-				-3.7
2,936,736	-				-1.4
2,936,791	+				+3.5
2,936,791	+				+2.9
2,936,791	+				-0.0
2,936,792	-				-1.2
2,936,792	-				-0.6
2,936,792	-				+0.6
2,936,792	-				+0.9
2,936,792	-				-1.4
2,936,799	+		AO353_13245	0.10	-1.1
2,936,799	+		AO353_13245	0.10	+0.6
2,936,799	+		AO353_13245	0.10	+3.5
2,936,799	+		AO353_13245	0.10	-0.1
2,936,800	-		AO353_13245	0.11	-0.6
2,936,800	-		AO353_13245	0.11	+0.2
2,936,800	-		AO353_13245	0.11	-0.9
2,936,816	+		AO353_13245	0.14	-0.4
2,936,816	+		AO353_13245	0.14	-0.4
2,936,817	+		AO353_13245	0.14	-0.4
2,936,817	-		AO353_13245	0.14	-1.8
2,936,817	-		AO353_13245	0.14	-0.6
2,936,817	-		AO353_13245	0.14	-0.4
2,936,828	-		AO353_13245	0.17	+0.6
2,936,869	+		AO353_13245	0.26	-0.1
2,936,870	-		AO353_13245	0.26	+0.2
2,936,870	-		AO353_13245	0.26	+0.0
2,936,870	-		AO353_13245	0.26	-0.6
2,936,870	-		AO353_13245	0.26	+0.6
2,937,007	-		AO353_13245	0.56	-0.1
2,937,007	-		AO353_13245	0.56	-3.3
2,937,007	-		AO353_13245	0.56	-0.4
2,937,010	+		AO353_13245	0.57	-1.5
2,937,010	+		AO353_13245	0.57	-0.4
2,937,010	+		AO353_13245	0.57	-2.2
2,937,010	+		AO353_13245	0.57	-0.6
2,937,010	+		AO353_13245	0.57	-0.4
2,937,010	+		AO353_13245	0.57	-0.1
2,937,011	-		AO353_13245	0.57	-0.1
2,937,011	-		AO353_13245	0.57	-0.6
2,937,011	-		AO353_13245	0.57	-0.9
2,937,049	+		AO353_13245	0.66	+1.2
2,937,104	+		AO353_13245	0.78	+0.2
2,937,105	-		AO353_13245	0.78	+1.6
2,937,110	+		AO353_13245	0.79	-3.1
2,937,135	+		AO353_13245	0.85	-0.1
2,937,135	+		AO353_13245	0.85	-0.6
2,937,135	+		AO353_13245	0.85	+0.6
2,937,135	+		AO353_13245	0.85	-0.1
2,937,135	+		AO353_13245	0.85	+2.0
2,937,135	+		AO353_13245	0.85	-2.9
2,937,136	-		AO353_13245	0.85	-2.7
2,937,136	-		AO353_13245	0.85	+0.8
2,937,136	-		AO353_13245	0.85	-0.6
2,937,136	-		AO353_13245	0.85	-1.5
2,937,136	-		AO353_13245	0.85	+0.2
2,937,136	-		AO353_13245	0.85	+0.6
2,937,136	-		AO353_13245	0.85	+1.2
2,937,141	+		AO353_13245	0.86	-0.9
2,937,141	+		AO353_13245	0.86	-1.6
2,937,141	+		AO353_13245	0.86	+1.3
2,937,141	+		AO353_13245	0.86	+0.1
2,937,142	-		AO353_13245	0.86	+1.9
2,937,144	+		AO353_13245	0.87	-1.6
2,937,144	+		AO353_13245	0.87	+0.2
2,937,144	+		AO353_13245	0.87	-1.7
2,937,144	+		AO353_13245	0.87	-1.2
2,937,145	-		AO353_13245	0.87	+0.2
2,937,179	+				-1.6
2,937,179	+				-0.4
2,937,179	+				+2.1
2,937,180	-				-0.8
2,937,180	-				-0.4
2,937,180	-				-1.5
2,937,180	-				-0.8
2,937,180	-				+2.2
2,937,192	+				+0.6
2,937,193	-				+2.2
2,937,193	-				-0.1
2,937,193	-				-0.9
2,937,202	+				+0.6
2,937,202	+				+2.2
2,937,203	-				+0.6
2,937,203	-				-0.9
2,937,206	+				-0.8
2,937,207	-				+3.0
2,937,207	-				+2.6
2,937,207	-				+2.0
2,937,255	-				-0.1
2,937,255	-				-0.1
2,937,255	-				-0.8
2,937,255	-				-2.2
2,937,260	+				+0.2
2,937,260	+				-0.8
2,937,260	+				+1.9
2,937,260	+				-1.6
2,937,260	+				+3.5
2,937,260	+				-0.1
2,937,260	+				-0.2
2,937,260	+				-0.4
2,937,260	+				-2.6
2,937,260	+				+0.2
2,937,260	+				-1.7
2,937,260	+				-1.4
2,937,260	+				-0.8
2,937,260	+				-0.9
2,937,260	+				-1.0
2,937,260	+				+0.6
2,937,260	+				-0.1
2,937,260	+				-1.4
2,937,261	-				+1.5
2,937,261	-				-1.5
2,937,261	-				+0.3
2,937,261	-				-0.4
2,937,261	-				-0.9
2,937,261	-				-0.0
2,937,261	-				-1.9
2,937,261	-				-2.5
2,937,261	-				-0.6
2,937,261	-				+3.4
2,937,261	-				+0.6
2,937,261	-				+0.2
2,937,261	-				+0.6
2,937,261	-				-0.8
2,937,261	-				-0.1
2,937,261	-				-1.2
2,937,261	-				+0.6
2,937,261	-				-1.9
2,937,261	-				-1.4
2,937,261	-				-1.5
2,937,261	-				+2.5
2,937,261	-				+1.2
2,937,456	-		AO353_13250	0.66	+1.3
2,937,507	+				-1.0
2,937,507	+				-1.0
2,937,507	+				+1.7
2,937,507	+				-1.0
2,937,507	+				-0.6
2,937,507	+				-0.4
2,937,638	-		AO353_13255	0.25	-0.1
2,937,773	+		AO353_13255	0.55	-3.0
2,937,773	+		AO353_13255	0.55	+0.2
2,937,773	+		AO353_13255	0.55	-1.5
2,937,773	+		AO353_13255	0.55	-1.0
2,937,773	+		AO353_13255	0.55	-1.4
2,937,774	-		AO353_13255	0.55	-1.0
2,937,774	-		AO353_13255	0.55	+2.9
2,937,802	+		AO353_13255	0.61	-1.2
2,937,802	+		AO353_13255	0.61	-1.6
2,937,803	-		AO353_13255	0.62	-1.1
2,937,803	-		AO353_13255	0.62	-3.0
2,937,803	-		AO353_13255	0.62	-0.8
2,937,803	-		AO353_13255	0.62	+3.0
2,937,807	-		AO353_13255	0.62	+0.4
2,937,807	-		AO353_13255	0.62	-1.0
2,937,807	-		AO353_13255	0.62	+0.6
2,937,824	-		AO353_13255	0.66	-1.4
2,937,833	+		AO353_13255	0.68	+2.2
2,937,833	+		AO353_13255	0.68	+1.2
2,937,833	+		AO353_13255	0.68	-1.4
2,937,833	+		AO353_13255	0.68	+0.6
2,937,833	+		AO353_13255	0.68	-1.1
2,937,833	+		AO353_13255	0.68	+0.6
2,937,833	+		AO353_13255	0.68	-0.1
2,937,833	+		AO353_13255	0.68	+1.2
2,937,833	+		AO353_13255	0.68	-1.4
2,937,833	+		AO353_13255	0.68	+0.2
2,937,833	+		AO353_13255	0.68	-0.4
2,937,833	+		AO353_13255	0.68	-0.1
2,937,834	-		AO353_13255	0.68	-0.6
2,937,834	-		AO353_13255	0.68	+0.8
2,937,834	-		AO353_13255	0.68	-0.5
2,937,834	-		AO353_13255	0.68	+2.2
2,937,834	-		AO353_13255	0.68	-2.2
2,937,834	-		AO353_13255	0.68	-0.9
2,937,834	-		AO353_13255	0.68	-0.4
2,937,834	-		AO353_13255	0.68	+1.6
2,937,834	-		AO353_13255	0.68	-0.6
2,937,834	-		AO353_13255	0.68	+0.2
2,937,837	+		AO353_13255	0.69	+1.6
2,937,837	+		AO353_13255	0.69	-1.5
2,937,837	+		AO353_13255	0.69	-0.4
2,937,837	+		AO353_13255	0.69	-2.6
2,937,837	+		AO353_13255	0.69	+0.2
2,937,838	-		AO353_13255	0.69	-1.4
2,937,838	-		AO353_13255	0.69	-1.4
2,937,838	-		AO353_13255	0.69	+0.2
2,937,838	-		AO353_13255	0.69	-1.2
2,937,838	-		AO353_13255	0.69	+0.9
2,937,880	+		AO353_13255	0.79	-1.6
2,937,881	-		AO353_13255	0.79	+0.6
2,938,012	+				-0.8
2,938,037	+		AO353_13260	0.14	-0.9
2,938,038	-		AO353_13260	0.14	+2.4
2,938,038	-		AO353_13260	0.14	+1.2
2,938,090	+		AO353_13260	0.26	-1.0
2,938,090	+		AO353_13260	0.26	-0.6
2,938,090	+		AO353_13260	0.26	-2.2
2,938,091	-		AO353_13260	0.26	-0.6
2,938,091	-		AO353_13260	0.26	-1.8
2,938,091	-		AO353_13260	0.26	-0.4
2,938,091	-		AO353_13260	0.26	-0.8
2,938,126	+		AO353_13260	0.34	-0.8
2,938,126	+		AO353_13260	0.34	-1.8
2,938,126	+		AO353_13260	0.34	-1.4
2,938,126	+		AO353_13260	0.34	-0.8
2,938,127	-		AO353_13260	0.34	-2.2
2,938,127	-		AO353_13260	0.34	+2.1
2,938,127	-		AO353_13260	0.34	+0.5
2,938,127	-		AO353_13260	0.34	+0.6
2,938,127	-		AO353_13260	0.34	-1.0
2,938,127	-		AO353_13260	0.34	+0.5
2,938,127	-		AO353_13260	0.34	-0.4
2,938,173	+		AO353_13260	0.44	-1.7
2,938,173	+		AO353_13260	0.44	-1.9
2,938,174	-		AO353_13260	0.45	+0.8
2,938,174	-		AO353_13260	0.45	+0.2
2,938,174	-		AO353_13260	0.45	+1.5
2,938,179	+		AO353_13260	0.46	-0.1
2,938,179	+		AO353_13260	0.46	-0.6
2,938,250	+		AO353_13260	0.62	-1.1
2,938,250	+		AO353_13260	0.62	+3.7
2,938,250	+		AO353_13260	0.62	-0.6
2,938,250	+		AO353_13260	0.62	+1.5
2,938,250	+		AO353_13260	0.62	+0.5
2,938,250	+		AO353_13260	0.62	-0.6
2,938,251	-		AO353_13260	0.62	-1.5
2,938,251	-		AO353_13260	0.62	-0.5
2,938,268	-		AO353_13260	0.66	-1.7
2,938,288	+		AO353_13260	0.70	-2.4
2,938,288	+		AO353_13260	0.70	+1.1
2,938,428	+				-0.4
2,938,428	+				+2.2
2,938,428	+				+2.5
2,938,469	-				+2.8
2,938,484	-				+0.4
2,938,484	-				-0.4
2,938,773	+				+1.8
2,938,773	+				+1.2
2,938,781	+				+0.6
2,938,781	+				-0.8
2,938,781	+				-1.9
2,938,781	+				-0.6
2,938,781	+				+1.2
2,938,781	+				-0.6
2,938,781	+				-1.5
2,938,781	+				-0.1
2,938,781	+				-0.4
2,938,781	+				-0.8