Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13015

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,882,143	+		AO353_13010	0.60	-2.0
2,882,143	+		AO353_13010	0.60	-2.3
2,882,144	-		AO353_13010	0.60	+0.5
2,882,144	-		AO353_13010	0.60	-1.6
2,882,144	-		AO353_13010	0.60	+0.7
2,882,366	-		AO353_13010	0.72	+0.8
2,882,366	-		AO353_13010	0.72	+2.2
2,882,366	-		AO353_13010	0.72	+0.6
2,882,366	-		AO353_13010	0.72	+2.8
2,882,366	-		AO353_13010	0.72	-0.8
2,882,366	-		AO353_13010	0.72	-1.6
2,882,366	-		AO353_13010	0.72	-0.2
2,882,470	+		AO353_13010	0.77	+1.6
2,882,470	+		AO353_13010	0.77	-2.0
2,882,470	+		AO353_13010	0.77	+1.2
2,882,471	-		AO353_13010	0.78	-0.9
2,882,471	-		AO353_13010	0.78	-1.6
2,882,471	-		AO353_13010	0.78	+1.7
2,882,471	-		AO353_13010	0.78	-1.1
2,882,471	-		AO353_13010	0.78	-2.7
2,882,471	-		AO353_13010	0.78	-1.1
2,882,471	-		AO353_13010	0.78	-1.7
2,882,536	+		AO353_13010	0.81	-0.9
2,882,536	+		AO353_13010	0.81	+1.5
2,882,536	+		AO353_13010	0.81	+0.7
2,882,536	+		AO353_13010	0.81	+0.7
2,882,536	+		AO353_13010	0.81	-0.1
2,882,536	+		AO353_13010	0.81	-0.6
2,882,537	-		AO353_13010	0.81	-0.6
2,882,537	-		AO353_13010	0.81	-1.1
2,882,537	-		AO353_13010	0.81	-2.0
2,882,537	-		AO353_13010	0.81	-1.9
2,882,537	-		AO353_13010	0.81	+0.2
2,882,537	-		AO353_13010	0.81	-0.5
2,882,537	-		AO353_13010	0.81	+3.1
2,882,680	+		AO353_13010	0.89	+0.2
2,882,680	+		AO353_13010	0.89	-1.2
2,882,680	+		AO353_13010	0.89	-1.8
2,882,681	-		AO353_13010	0.89	-1.2
2,882,786	-				+0.2
2,882,786	-				+1.7
2,882,786	-				+1.2
2,882,881	+				-0.6
2,882,881	+				-0.6
2,882,881	+				+2.2
2,882,881	+				+0.2
2,882,881	+				+3.6
2,882,882	-				-0.9
2,882,882	-				+0.5
2,882,882	-				-1.1
2,882,882	-				+1.2
2,882,972	+				-0.1
2,882,972	+				-1.7
2,882,991	+				+0.5
2,882,991	+				-0.6
2,882,991	+				+0.3
2,882,991	+				-1.0
2,882,991	+				+2.5
2,882,992	-				-0.1
2,883,013	-				+1.2
2,883,013	-				-0.1
2,883,128	+				-0.1
2,883,129	-				+0.7
2,883,129	-				-1.5
2,883,129	-				+4.1
2,883,132	+				-1.9
2,883,132	+				+0.2
2,883,132	+				-1.8
2,883,132	+				-0.6
2,883,132	+				-0.3
2,883,132	+				+3.4
2,883,132	+				+1.2
2,883,132	+				+3.2
2,883,132	+				+2.2
2,883,132	+				-0.3
2,883,132	+				+1.0
2,883,132	+				-0.9
2,883,133	-				+2.0
2,883,133	-				-0.6
2,883,133	-				+2.2
2,883,133	-				-2.1
2,883,133	-				-1.2
2,883,133	-				+1.2
2,883,133	-				-0.8
2,883,133	-				-0.3
2,883,133	-				-0.3
2,883,133	-				+2.2
2,883,133	-				-1.5
2,883,133	-				-1.2
2,883,579	-		AO353_13015	0.36	-0.8
2,883,579	-		AO353_13015	0.36	-0.9
2,883,789	+		AO353_13015	0.52	+0.2
2,883,790	-		AO353_13015	0.53	-1.5
2,883,820	+		AO353_13015	0.55	+0.2
2,883,821	-		AO353_13015	0.55	-0.9
2,883,821	-		AO353_13015	0.55	-1.1
2,883,821	-		AO353_13015	0.55	+0.5
2,883,854	+		AO353_13015	0.57	+2.2
2,883,855	-		AO353_13015	0.58	+2.0
2,883,855	-		AO353_13015	0.58	-1.3
2,883,885	+		AO353_13015	0.60	+0.9
2,883,885	+		AO353_13015	0.60	+0.2
2,883,885	+		AO353_13015	0.60	-0.1
2,883,886	-		AO353_13015	0.60	-1.1
2,883,886	-		AO353_13015	0.60	-0.1
2,883,886	-		AO353_13015	0.60	-3.2
2,884,122	+		AO353_13015	0.78	-0.6
2,884,278	+				+1.2
2,884,278	+				+0.2
2,884,278	+				-0.3
2,884,278	+				+1.8
2,884,279	-				+2.6
2,884,279	-				+2.1
2,884,279	-				-1.1
2,884,279	-				+2.1
2,884,279	-				-0.8
2,884,334	-				+0.4
2,884,377	+				-1.1
2,884,377	+				-1.5
2,884,378	-				+1.2
2,884,378	-				-0.6
2,884,457	+		AO353_13020	0.11	-0.6
2,884,458	-		AO353_13020	0.12	+0.7
2,884,458	-		AO353_13020	0.12	-0.3
2,884,481	+		AO353_13020	0.15	-0.8
2,884,481	+		AO353_13020	0.15	-1.5
2,884,481	+		AO353_13020	0.15	-1.5
2,884,481	+		AO353_13020	0.15	-0.1
2,884,481	+		AO353_13020	0.15	-1.1
2,884,481	+		AO353_13020	0.15	-0.3
2,884,482	-		AO353_13020	0.15	+0.7
2,884,482	-		AO353_13020	0.15	+0.5
2,884,482	-		AO353_13020	0.15	+1.6
2,884,590	+		AO353_13020	0.29	+2.2
2,884,590	+		AO353_13020	0.29	-0.1
2,884,590	+		AO353_13020	0.29	-0.3
2,884,590	+		AO353_13020	0.29	-1.3
2,884,590	+		AO353_13020	0.29	+1.5
2,884,590	+		AO353_13020	0.29	-0.1
2,884,590	+		AO353_13020	0.29	-1.1
2,884,590	+		AO353_13020	0.29	-0.1
2,884,590	+		AO353_13020	0.29	-0.3
2,884,590	+		AO353_13020	0.29	+0.7
2,884,591	-		AO353_13020	0.29	-0.3
2,884,591	-		AO353_13020	0.29	-0.8
2,884,591	-		AO353_13020	0.29	+1.2
2,884,591	-		AO353_13020	0.29	+0.2
2,884,591	-		AO353_13020	0.29	-0.3
2,884,591	-		AO353_13020	0.29	-0.6
2,884,591	-		AO353_13020	0.29	-0.6
2,884,591	-		AO353_13020	0.29	-0.6
2,884,624	+		AO353_13020	0.34	-2.2
2,884,624	+		AO353_13020	0.34	-2.6
2,884,624	+		AO353_13020	0.34	-0.6
2,884,624	+		AO353_13020	0.34	-0.9
2,884,624	+		AO353_13020	0.34	-0.3
2,884,624	+		AO353_13020	0.34	-0.1
2,884,624	+		AO353_13020	0.34	-2.6
2,884,625	-		AO353_13020	0.34	-0.1
2,884,625	-		AO353_13020	0.34	+1.6
2,884,625	-		AO353_13020	0.34	+2.0
2,884,625	-		AO353_13020	0.34	+1.2
2,884,625	-		AO353_13020	0.34	-0.3
2,884,625	-		AO353_13020	0.34	+0.7
2,884,625	-		AO353_13020	0.34	-1.8
2,884,685	+		AO353_13020	0.42	-0.6
2,884,685	+		AO353_13020	0.42	-0.3
2,884,686	-				+2.2
2,884,686	-		AO353_13020	0.42	+1.9
2,884,692	+		AO353_13020	0.43	+0.7
2,884,736	+		AO353_13020	0.49	-0.6
2,884,736	+		AO353_13020	0.49	-0.3
2,884,736	+		AO353_13020	0.49	-0.9
2,884,736	+		AO353_13020	0.49	-0.1
2,884,736	+		AO353_13020	0.49	-0.1
2,884,737	-		AO353_13020	0.49	-0.8
2,884,737	-		AO353_13020	0.49	+0.7
2,884,737	-		AO353_13020	0.49	-1.8
2,884,737	-		AO353_13020	0.49	-1.5
2,884,737	-		AO353_13020	0.49	+1.9
2,884,780	+		AO353_13020	0.55	-1.7
2,884,780	+		AO353_13020	0.55	+0.2
2,884,780	+		AO353_13020	0.55	-3.6
2,884,780	+		AO353_13020	0.55	-0.7
2,884,780	+		AO353_13020	0.55	+1.7
2,884,780	+		AO353_13020	0.55	-2.6
2,884,780	+		AO353_13020	0.55	-0.6
2,884,780	+		AO353_13020	0.55	-0.1
2,884,781	-		AO353_13020	0.55	-1.6
2,884,781	-		AO353_13020	0.55	+0.2
2,884,781	-		AO353_13020	0.55	+2.6
2,884,781	-		AO353_13020	0.55	-3.0
2,884,781	-		AO353_13020	0.55	-0.6
2,884,781	-		AO353_13020	0.55	-1.8
2,884,781	-		AO353_13020	0.55	+1.2
2,884,781	-		AO353_13020	0.55	-1.3
2,884,781	-		AO353_13020	0.55	+0.2
2,884,796	+		AO353_13020	0.57	+0.2
2,884,796	+		AO353_13020	0.57	+2.0
2,884,796	+		AO353_13020	0.57	+1.2
2,884,796	+		AO353_13020	0.57	+0.6
2,884,796	+		AO353_13020	0.57	+1.9
2,884,797	-		AO353_13020	0.57	-0.4
2,884,841	+		AO353_13020	0.63	-0.3
2,885,026	+		AO353_13020	0.88	-0.3
2,885,026	+		AO353_13020	0.88	-1.7
2,885,026	+		AO353_13020	0.88	-1.2
2,885,026	+		AO353_13020	0.88	+1.2
2,885,026	+		AO353_13020	0.88	-0.8
2,885,027	-		AO353_13020	0.88	+2.4
2,885,027	-		AO353_13020	0.88	-0.8
2,885,085	+				-0.1
2,885,086	-				+3.8
2,885,192	+				+2.2
2,885,193	-				+2.4
2,885,197	+				-1.2
2,885,197	+				+0.2
2,885,197	+				+0.1
2,885,197	+				+0.7
2,885,197	+				-1.8
2,885,197	+				-1.7
2,885,197	+				-2.0
2,885,197	+				-1.6
2,885,197	+				+1.2
2,885,197	+				+1.0
2,885,197	+				-1.7
2,885,198	-				-0.5
2,885,198	-				-0.4
2,885,198	-				+0.2
2,885,198	-				+0.8
2,885,201	+				+1.2
2,885,201	+				+1.5
2,885,201	+				-0.4
2,885,202	-				-1.8
2,885,202	-				-1.0
2,885,202	-				+0.1
2,885,202	-				+2.2
2,885,211	+				+0.2
2,885,211	+				+2.0
2,885,211	+				-0.1
2,885,212	-				-1.1
2,885,212	-				+3.2
2,885,212	-				+0.8
2,885,212	-				-1.8
2,885,212	-				-1.1
2,885,237	+				-0.1
2,885,284	-				-0.4
2,885,327	+				-3.6
2,885,327	+				-1.5
2,885,327	+				+1.9
2,885,327	+				-1.5
2,885,327	+				+3.2
2,885,328	-				+0.2
2,885,328	-				-2.8
2,885,341	+				-0.8
2,885,341	+				-1.7
2,885,341	+				+0.2
2,885,341	+				-0.9
2,885,342	-				+1.8
2,885,342	-				+0.6
2,885,342	-				-0.8
2,885,376	+				+2.0
2,885,376	+				-1.2
2,885,376	+				+1.5
2,885,377	-				-0.8
2,885,386	-				+0.1
2,885,386	-				+2.6
2,885,386	-				+1.1