Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12830

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,830,724	+		AO353_12825	0.23	+3.0
2,830,724	+		AO353_12825	0.23	-0.7
2,830,724	+		AO353_12825	0.23	-0.5
2,830,725	-		AO353_12825	0.23	+0.3
2,830,725	-		AO353_12825	0.23	-1.0
2,830,751	+		AO353_12825	0.26	-2.2
2,830,751	+		AO353_12825	0.26	+2.2
2,830,752	-		AO353_12825	0.27	+1.3
2,830,752	-		AO353_12825	0.27	-0.8
2,830,752	-		AO353_12825	0.27	-1.3
2,830,879	+		AO353_12825	0.44	-2.2
2,830,880	-		AO353_12825	0.44	+2.1
2,830,880	-		AO353_12825	0.44	+0.7
2,830,894	-		AO353_12825	0.46	-0.9
2,830,912	-		AO353_12825	0.48	-1.4
2,830,937	+		AO353_12825	0.52	+2.8
2,830,938	-		AO353_12825	0.52	+1.2
2,830,938	-		AO353_12825	0.52	-1.9
2,830,938	-		AO353_12825	0.52	+0.3
2,830,938	-		AO353_12825	0.52	+0.7
2,830,938	-		AO353_12825	0.52	-1.5
2,830,938	-		AO353_12825	0.52	+2.8
2,831,175	-		AO353_12825	0.84	+0.3
2,831,175	-		AO353_12825	0.84	+1.1
2,831,199	+		AO353_12825	0.87	-1.0
2,831,199	+		AO353_12825	0.87	+0.7
2,831,199	+		AO353_12825	0.87	-1.2
2,831,334	+				-0.7
2,831,334	+				-1.0
2,831,334	+				+1.0
2,831,380	-				-0.3
2,831,380	-				-1.3
2,831,401	-				-1.3
2,831,563	+				-1.0
2,831,563	+				-0.3
2,831,564	-				-0.9
2,831,564	-				+1.0
2,831,564	-				-1.9
2,831,583	+				-1.6
2,831,583	+				+0.7
2,831,583	+				-0.2
2,831,583	+				-2.5
2,831,584	-				-0.8
2,831,661	+				-0.5
2,831,684	-				-0.3
2,831,684	-				+0.7
2,831,743	+				+1.4
2,831,743	+				-0.5
2,831,744	-				+1.0
2,831,744	-				+0.7
2,832,229	+		AO353_12830	0.20	+2.6
2,832,230	-		AO353_12830	0.20	-2.1
2,832,230	-		AO353_12830	0.20	-0.7
2,832,230	-		AO353_12830	0.20	-0.7
2,832,230	-		AO353_12830	0.20	+1.4
2,832,304	+		AO353_12830	0.21	+2.0
2,832,304	+		AO353_12830	0.21	-0.9
2,832,304	+		AO353_12830	0.21	-0.5
2,832,304	+		AO353_12830	0.21	+1.0
2,832,304	+		AO353_12830	0.21	+0.3
2,832,304	+		AO353_12830	0.21	-1.2
2,832,304	+		AO353_12830	0.21	-2.5
2,832,304	+		AO353_12830	0.21	+1.3
2,832,304	+		AO353_12830	0.21	-1.3
2,832,304	+		AO353_12830	0.21	-1.5
2,832,304	+		AO353_12830	0.21	-1.9
2,832,304	+		AO353_12830	0.21	+0.3
2,832,304	+		AO353_12830	0.21	+2.3
2,832,305	-		AO353_12830	0.21	+2.7
2,832,305	-		AO353_12830	0.21	-0.3
2,832,305	-		AO353_12830	0.21	-1.3
2,832,305	-		AO353_12830	0.21	+0.7
2,832,305	-		AO353_12830	0.21	-1.8
2,832,305	-		AO353_12830	0.21	+1.3
2,832,305	-		AO353_12830	0.21	-0.0
2,832,305	-		AO353_12830	0.21	-1.9
2,832,305	-		AO353_12830	0.21	+1.5
2,832,316	+		AO353_12830	0.21	-0.5
2,832,409	-		AO353_12830	0.23	-2.1
2,832,750	+		AO353_12830	0.30	-0.7
2,832,751	-		AO353_12830	0.30	-1.4
2,832,775	+		AO353_12830	0.31	+0.4
2,832,775	+		AO353_12830	0.31	-1.5
2,832,775	+		AO353_12830	0.31	-1.7
2,832,775	+		AO353_12830	0.31	-1.6
2,832,835	+		AO353_12830	0.32	-0.9
2,832,877	+		AO353_12830	0.33	-0.7
2,832,877	+		AO353_12830	0.33	+0.3
2,832,877	+		AO353_12830	0.33	-1.2
2,832,877	+		AO353_12830	0.33	-0.5
2,832,877	+		AO353_12830	0.33	-0.3
2,832,877	+		AO353_12830	0.33	-1.4
2,832,877	+		AO353_12830	0.33	-0.3
2,832,877	+		AO353_12830	0.33	-0.5
2,832,877	+		AO353_12830	0.33	-0.3
2,832,877	+		AO353_12830	0.33	-2.9
2,832,877	+		AO353_12830	0.33	-1.3
2,832,878	-		AO353_12830	0.33	-1.7
2,832,878	-		AO353_12830	0.33	-1.2
2,832,878	-		AO353_12830	0.33	-1.0
2,832,878	-		AO353_12830	0.33	-2.3
2,832,878	-		AO353_12830	0.33	-1.8
2,832,878	-		AO353_12830	0.33	-1.5
2,832,964	+		AO353_12830	0.35	+1.0
2,833,060	+		AO353_12830	0.37	+0.3
2,833,129	+		AO353_12830	0.38	+1.3
2,833,129	+		AO353_12830	0.38	+1.3
2,833,129	+		AO353_12830	0.38	-0.7
2,833,261	+		AO353_12830	0.41	+2.3
2,833,261	+		AO353_12830	0.41	-1.2
2,833,261	+		AO353_12830	0.41	+1.4
2,833,262	-		AO353_12830	0.41	-1.2
2,833,262	-		AO353_12830	0.41	+0.7
2,833,262	-		AO353_12830	0.41	-0.3
2,833,262	-		AO353_12830	0.41	+2.3
2,833,262	-		AO353_12830	0.41	+2.3
2,833,321	+		AO353_12830	0.42	-2.4
2,833,321	+		AO353_12830	0.42	-1.0
2,833,322	-		AO353_12830	0.42	+1.8
2,833,322	-		AO353_12830	0.42	+0.7
2,833,322	-		AO353_12830	0.42	-1.2
2,833,322	-		AO353_12830	0.42	-0.4
2,833,322	-		AO353_12830	0.42	-0.3
2,833,322	-		AO353_12830	0.42	+1.0
2,833,346	+		AO353_12830	0.43	-0.5
2,833,390	+		AO353_12830	0.44	-0.3
2,833,391	-		AO353_12830	0.44	+1.2
2,833,391	-		AO353_12830	0.44	+1.0
2,833,447	+		AO353_12830	0.45	-2.0
2,833,511	-		AO353_12830	0.46	+1.0
2,833,516	+		AO353_12830	0.46	+0.3
2,833,568	-		AO353_12830	0.48	-2.7
2,833,568	-		AO353_12830	0.48	-0.0
2,833,568	-		AO353_12830	0.48	-1.5
2,833,631	-		AO353_12830	0.49	-1.7
2,833,636	+		AO353_12830	0.49	-0.5
2,833,637	-		AO353_12830	0.49	+2.5
2,833,762	+		AO353_12830	0.52	-0.3
2,833,762	+		AO353_12830	0.52	-1.9
2,833,763	-		AO353_12830	0.52	+1.9
2,833,763	-		AO353_12830	0.52	-1.2
2,833,763	-		AO353_12830	0.52	-1.3
2,833,888	+		AO353_12830	0.54	-0.3
2,833,888	+		AO353_12830	0.54	-2.3
2,833,888	+		AO353_12830	0.54	+1.1
2,833,889	-		AO353_12830	0.54	+2.3
2,833,889	-		AO353_12830	0.54	-1.5
2,833,945	+		AO353_12830	0.55	-1.6
2,833,946	-		AO353_12830	0.55	-0.0
2,833,946	-		AO353_12830	0.55	+1.3
2,833,951	+		AO353_12830	0.56	-0.9
2,833,951	+		AO353_12830	0.56	-0.0
2,833,952	-		AO353_12830	0.56	-0.5
2,833,952	-		AO353_12830	0.56	-1.6
2,833,952	-		AO353_12830	0.56	+0.5
2,834,083	+		AO353_12830	0.58	-1.2
2,834,083	+		AO353_12830	0.58	-0.7
2,834,140	+		AO353_12830	0.59	-0.5
2,834,141	-		AO353_12830	0.60	+1.4
2,834,141	-		AO353_12830	0.60	-0.3
2,834,141	-		AO353_12830	0.60	-0.0
2,834,141	-		AO353_12830	0.60	-0.9
2,834,147	-		AO353_12830	0.60	-1.5
2,834,215	+		AO353_12830	0.61	-1.0
2,834,215	+		AO353_12830	0.61	+2.5
2,834,216	-		AO353_12830	0.61	-0.0
2,834,216	-		AO353_12830	0.61	+1.6
2,834,216	-		AO353_12830	0.61	-0.7
2,834,216	-		AO353_12830	0.61	-0.7
2,834,216	-		AO353_12830	0.61	+4.0
2,834,279	-		AO353_12830	0.62	+1.3
2,834,279	-		AO353_12830	0.62	-0.3
2,834,465	-		AO353_12830	0.66	-0.0
2,834,577	+		AO353_12830	0.69	+0.9
2,834,585	-		AO353_12830	0.69	-2.0
2,834,585	-		AO353_12830	0.69	+1.5
2,834,585	-		AO353_12830	0.69	+0.3
2,834,647	+		AO353_12830	0.70	-2.0
2,834,647	+		AO353_12830	0.70	+0.3
2,834,647	+		AO353_12830	0.70	-1.2
2,834,648	-		AO353_12830	0.70	-1.6
2,834,648	-		AO353_12830	0.70	+0.3
2,834,648	-		AO353_12830	0.70	-0.8
2,834,659	+		AO353_12830	0.70	+1.2
2,834,660	-		AO353_12830	0.70	+0.3
2,834,660	-		AO353_12830	0.70	-1.5
2,834,660	-		AO353_12830	0.70	+0.3
2,834,660	-		AO353_12830	0.70	-0.7
2,834,665	+		AO353_12830	0.70	-0.0
2,834,665	+		AO353_12830	0.70	-0.0
2,834,665	+		AO353_12830	0.70	-1.5
2,834,666	-		AO353_12830	0.70	+1.0
2,834,666	-		AO353_12830	0.70	-1.4
2,834,666	-		AO353_12830	0.70	-1.3
2,834,666	-		AO353_12830	0.70	+2.4
2,834,722	+		AO353_12830	0.72	-2.8
2,834,722	+		AO353_12830	0.72	+2.1
2,834,722	+		AO353_12830	0.72	-1.6
2,834,723	-		AO353_12830	0.72	+0.3
2,834,723	-		AO353_12830	0.72	-0.1
2,834,723	-		AO353_12830	0.72	-0.5
2,834,723	-		AO353_12830	0.72	-1.2
2,834,723	-		AO353_12830	0.72	-1.8
2,834,723	-		AO353_12830	0.72	-1.0
2,834,723	-		AO353_12830	0.72	+1.0
2,834,723	-		AO353_12830	0.72	-0.7
2,834,723	-		AO353_12830	0.72	+1.3
2,834,725	+		AO353_12830	0.72	-0.0
2,834,725	+		AO353_12830	0.72	-2.0
2,834,725	+		AO353_12830	0.72	+0.5
2,834,725	+		AO353_12830	0.72	+2.9
2,834,725	+		AO353_12830	0.72	-1.3
2,834,726	-		AO353_12830	0.72	+2.8
2,834,726	-		AO353_12830	0.72	+1.3
2,834,726	-		AO353_12830	0.72	-1.9
2,834,726	-		AO353_12830	0.72	-2.2
2,834,728	+		AO353_12830	0.72	-1.6
2,834,728	+		AO353_12830	0.72	+1.3
2,834,728	+		AO353_12830	0.72	-0.5
2,834,728	+		AO353_12830	0.72	-1.5
2,834,728	+		AO353_12830	0.72	-0.0
2,834,729	-		AO353_12830	0.72	-2.0
2,834,729	-		AO353_12830	0.72	-0.5
2,835,209	-		AO353_12830	0.82	-0.9
2,835,283	+		AO353_12830	0.83	-1.5
2,835,283	+		AO353_12830	0.83	+0.3
2,835,283	+		AO353_12830	0.83	+0.3
2,835,364	+		AO353_12830	0.85	-2.3
2,835,364	+		AO353_12830	0.85	-0.5
2,835,364	+		AO353_12830	0.85	-0.7
2,835,364	+		AO353_12830	0.85	-0.3
2,835,364	+		AO353_12830	0.85	+2.5
2,835,364	+		AO353_12830	0.85	+0.3
2,835,365	-		AO353_12830	0.85	+3.7
2,835,391	+		AO353_12830	0.86	-1.6
2,835,391	+		AO353_12830	0.86	-1.4
2,835,392	-		AO353_12830	0.86	-0.7
2,835,392	-		AO353_12830	0.86	-1.2
2,835,392	-		AO353_12830	0.86	-0.0
2,835,406	+		AO353_12830	0.86	-1.4
2,835,407	-		AO353_12830	0.86	+0.5
2,835,407	-		AO353_12830	0.86	+1.0
2,835,407	-		AO353_12830	0.86	+1.4
2,835,409	+		AO353_12830	0.86	-0.0
2,835,409	+		AO353_12830	0.86	-1.7
2,835,409	+		AO353_12830	0.86	+0.3
2,835,409	+		AO353_12830	0.86	-1.8
2,835,409	+		AO353_12830	0.86	-1.0
2,835,409	+		AO353_12830	0.86	+3.6
2,835,409	+		AO353_12830	0.86	-0.2
2,835,409	+		AO353_12830	0.86	+1.4
2,835,409	+		AO353_12830	0.86	+5.9
2,835,409	+		AO353_12830	0.86	+2.3
2,835,409	+		AO353_12830	0.86	-0.5
2,835,410	-		AO353_12830	0.86	+0.7
2,835,410	-		AO353_12830	0.86	+3.6
2,835,410	-		AO353_12830	0.86	+0.3
2,835,410	-		AO353_12830	0.86	+3.4
2,835,410	-		AO353_12830	0.86	-0.1
2,835,467	+		AO353_12830	0.87	+0.3
2,835,475	+		AO353_12830	0.87	-0.5
2,835,481	+		AO353_12830	0.88	-0.7
2,835,482	-		AO353_12830	0.88	-1.8
2,835,558	+		AO353_12830	0.89	+2.3
2,835,559	-		AO353_12830	0.89	+0.9
2,835,559	-		AO353_12830	0.89	+0.3
2,835,559	-		AO353_12830	0.89	+1.0
2,835,559	-		AO353_12830	0.89	-0.3
2,835,559	-		AO353_12830	0.89	-0.0
2,835,706	-				-0.0
2,835,706	-				-2.2
2,835,749	+				-2.0
2,835,750	-				-0.0
2,835,812	-				-0.5
2,835,845	+				+0.7
2,835,862	-				+1.6
2,835,862	-				-0.3
2,835,874	+				-1.7
2,835,874	+				-2.7
2,835,875	-				-0.1
2,835,888	-				-0.0
2,835,888	-				+0.7
2,835,896	+				+0.3
2,835,898	+				+2.6
2,835,898	+				+1.5
2,835,914	+				+1.3
2,835,914	+				+0.5
2,835,918	+				-1.0
2,835,918	+				+0.3
2,835,919	-				-0.7
2,835,919	-				+1.3
2,835,919	-				+2.3
2,835,919	-				-0.5
2,835,982	+				-2.8
2,835,983	-				+2.3
2,835,983	-				+2.0
2,835,984	+				+0.3
2,835,984	+				+2.1
2,835,985	-				+2.2
2,836,017	+				-0.3
2,836,017	+				-0.5
2,836,017	+				-0.9
2,836,063	+				-0.9
2,836,063	+				+1.8
2,836,095	-				+3.3
2,836,103	+				-1.3
2,836,103	+				-0.8
2,836,104	-				+0.3
2,836,104	-				-2.1
2,836,117	+		AO353_12835	0.10	+0.7
2,836,117	+		AO353_12835	0.10	+0.1
2,836,118	-		AO353_12835	0.11	-1.3
2,836,194	-		AO353_12835	0.32	-0.0
2,836,213	+		AO353_12835	0.37	-1.2
2,836,250	+		AO353_12835	0.48	-0.0
2,836,272	+		AO353_12835	0.54	+0.3
2,836,272	+		AO353_12835	0.54	+1.5
2,836,273	-		AO353_12835	0.54	-1.6
2,836,291	-		AO353_12835	0.59	+0.7
2,836,345	-		AO353_12835	0.74	+2.5
2,836,345	-		AO353_12835	0.74	+0.7
2,836,380	-		AO353_12835	0.84	-2.7
2,836,423	+				-0.3
2,836,434	+				-0.7
2,836,437	+				+0.3
2,836,437	+				+2.1
2,836,437	+				-1.3
2,836,437	+				-0.5
2,836,437	+				+1.5
2,836,438	-				-1.8
2,836,443	+				+0.7
2,836,443	+				-0.3
2,836,443	+				+1.6
2,836,443	+				+4.1
2,836,443	+				+0.8
2,836,443	+				+0.7
2,836,443	+				-1.5
2,836,444	-				+0.0
2,836,444	-				-0.0
2,836,444	-				-0.0
2,836,444	-				+0.3
2,836,444	-				-1.8
2,836,470	-				+1.4
2,836,470	-				+2.1
2,836,476	-				-0.0
2,836,513	+				-0.9
2,836,513	+				+6.4
2,836,514	-				-2.3
2,836,517	+				+1.3
2,836,517	+				-0.3
2,836,517	+				+1.0
2,836,517	+				+0.8
2,836,518	-				-0.0
2,836,518	-				-1.0
2,836,518	-				-0.3
2,836,518	-				-1.2
2,836,518	-				+0.3
2,836,518	-				-0.3
2,836,518	-				+0.0
2,836,518	-				-1.4
2,836,518	-				-1.3
2,836,518	-				-1.2
2,836,518	-				+2.5
2,836,521	+				-0.0
2,836,522	-				+1.3
2,836,522	-				+0.5
2,836,522	-				-0.3
2,836,549	+				+1.3
2,836,549	+				+0.0
2,836,549	+				+2.8
2,836,550	-				+0.7
2,836,550	-				+1.5
2,836,550	-				-0.5
2,836,626	+				-1.4
2,836,626	+				-0.0
2,836,627	-				-0.3
2,836,653	+				-0.5
2,836,653	+				+2.3
2,836,654	-				-0.3
2,836,654	-				-1.3
2,836,654	-				-1.2
2,836,654	-				-0.3
2,836,660	+				-0.3
2,836,660	+				+3.5
2,836,660	+				-1.5
2,836,660	+				-0.9
2,836,660	+				-0.0
2,836,661	-				-2.3
2,836,661	-				+1.6
2,836,661	-				+3.7
2,836,661	-				+0.3
2,836,695	+				+1.9
2,836,695	+				-1.1
2,836,695	+				-3.4
2,836,696	-				+1.3
2,836,797	+		AO353_12840	0.13	-1.4
2,836,797	+		AO353_12840	0.13	+2.0
2,836,798	-		AO353_12840	0.13	+1.5
2,836,827	+		AO353_12840	0.16	+1.9
2,836,827	+		AO353_12840	0.16	+2.6
2,836,827	+		AO353_12840	0.16	+0.4
2,836,827	+		AO353_12840	0.16	-0.5
2,836,827	+		AO353_12840	0.16	-0.4
2,836,828	-		AO353_12840	0.17	+3.7
2,836,828	-		AO353_12840	0.17	-0.1
2,836,828	-		AO353_12840	0.17	-2.6
2,836,866	+		AO353_12840	0.21	-0.3
2,836,866	+		AO353_12840	0.21	+0.7
2,836,926	+		AO353_12840	0.28	+1.8
2,836,926	+		AO353_12840	0.28	+1.3
2,836,926	+		AO353_12840	0.28	-2.7
2,836,926	+		AO353_12840	0.28	-2.0
2,836,926	+		AO353_12840	0.28	-0.9
2,836,927	-		AO353_12840	0.28	-1.6
2,836,971	+		AO353_12840	0.34	+3.1
2,836,971	+		AO353_12840	0.34	-0.7
2,836,971	+		AO353_12840	0.34	-1.4
2,836,974	+		AO353_12840	0.34	+1.3