Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12775

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,809,447	+		AO353_12770	0.41	+0.3
2,809,582	+		AO353_12770	0.50	-2.3
2,809,583	-		AO353_12770	0.51	-0.5
2,809,645	+		AO353_12770	0.55	-1.2
2,809,645	+		AO353_12770	0.55	+2.5
2,809,645	+		AO353_12770	0.55	-0.7
2,809,645	+		AO353_12770	0.55	+3.3
2,809,646	-		AO353_12770	0.55	-1.5
2,809,646	-		AO353_12770	0.55	+1.3
2,809,646	-		AO353_12770	0.55	+1.0
2,809,646	-		AO353_12770	0.55	-1.8
2,809,689	+		AO353_12770	0.58	-1.7
2,809,689	+		AO353_12770	0.58	-0.5
2,809,689	+		AO353_12770	0.58	-0.1
2,809,689	+		AO353_12770	0.58	-2.7
2,809,689	+		AO353_12770	0.58	+0.8
2,809,732	+		AO353_12770	0.61	+3.0
2,809,733	-		AO353_12770	0.61	+0.3
2,809,735	+		AO353_12770	0.61	+2.9
2,809,736	-		AO353_12770	0.61	+1.6
2,809,736	-		AO353_12770	0.61	-1.7
2,809,741	+		AO353_12770	0.61	-0.7
2,809,742	-		AO353_12770	0.61	-0.1
2,809,977	+		AO353_12770	0.77	+3.3
2,809,977	+		AO353_12770	0.77	-0.5
2,809,977	+		AO353_12770	0.77	-1.3
2,809,977	+		AO353_12770	0.77	-1.9
2,809,977	+		AO353_12770	0.77	+0.3
2,809,977	+		AO353_12770	0.77	+1.9
2,809,977	+		AO353_12770	0.77	+0.4
2,809,977	+		AO353_12770	0.77	-0.5
2,809,977	+		AO353_12770	0.77	-1.3
2,809,977	+		AO353_12770	0.77	-1.4
2,809,978	-		AO353_12770	0.78	-1.1
2,809,978	-		AO353_12770	0.78	-0.9
2,809,978	-		AO353_12770	0.78	+0.8
2,809,978	-		AO353_12770	0.78	-0.5
2,809,978	-		AO353_12770	0.78	-1.7
2,809,978	-		AO353_12770	0.78	+0.7
2,809,978	-		AO353_12770	0.78	+3.9
2,809,978	-		AO353_12770	0.78	-2.1
2,809,978	-				-0.7
2,809,978	-		AO353_12770	0.78	+0.9
2,810,005	+		AO353_12770	0.79	+2.7
2,810,005	+		AO353_12770	0.79	+1.5
2,810,005	+		AO353_12770	0.79	+3.7
2,810,005	+		AO353_12770	0.79	+0.4
2,810,005	+		AO353_12770	0.79	-2.4
2,810,053	+		AO353_12770	0.83	+2.3
2,810,053	+		AO353_12770	0.83	-2.1
2,810,054	-		AO353_12770	0.83	-2.1
2,810,054	-		AO353_12770	0.83	+1.3
2,810,054	-		AO353_12770	0.83	+0.3
2,810,054	-		AO353_12770	0.83	-1.2
2,810,054	-		AO353_12770	0.83	+3.9
2,810,077	+		AO353_12770	0.84	+0.7
2,810,077	+		AO353_12770	0.84	-0.9
2,810,077	+		AO353_12770	0.84	-0.3
2,810,078	-		AO353_12770	0.84	+3.9
2,810,235	+				+1.8
2,810,235	+				-0.5
2,810,235	+				-1.2
2,810,235	+				-0.5
2,810,235	+				+1.1
2,810,235	+				-0.3
2,810,236	-				+0.7
2,810,236	-				+1.5
2,810,236	-				+1.4
2,810,236	-				-0.3
2,810,236	-				-1.1
2,810,236	-				+1.8
2,810,236	-				-0.5
2,810,236	-				+0.7
2,810,236	-				-1.3
2,810,377	+				-0.3
2,810,377	+				-0.7
2,810,377	+				-0.3
2,810,378	-				-0.2
2,810,409	+				+0.3
2,810,409	+				-0.3
2,810,409	+				-0.3
2,810,409	+				-1.6
2,810,410	-				+1.3
2,810,410	-				-0.5
2,810,598	+				-0.9
2,810,599	-				-1.2
2,810,599	-				-0.1
2,810,642	+				-2.3
2,810,642	+				-0.1
2,810,642	+				+2.5
2,810,642	+				-1.8
2,810,643	-				-1.4
2,810,643	-				+1.3
2,810,643	-				+0.7
2,810,643	-				-0.1
2,810,706	+		AO353_12775	0.10	-1.3
2,810,707	-		AO353_12775	0.10	-0.5
2,810,707	-		AO353_12775	0.10	+0.7
2,810,707	-		AO353_12775	0.10	-0.9
2,810,710	+		AO353_12775	0.10	+1.6
2,810,711	-		AO353_12775	0.10	+2.6
2,810,711	-		AO353_12775	0.10	-0.9
2,810,711	-		AO353_12775	0.10	-0.5
2,810,711	-		AO353_12775	0.10	+0.7
2,810,711	-		AO353_12775	0.10	+0.3
2,810,711	-		AO353_12775	0.10	-0.9
2,810,711	-		AO353_12775	0.10	-0.1
2,811,092	+		AO353_12775	0.22	+1.3
2,811,092	+		AO353_12775	0.22	-1.3
2,811,092	+		AO353_12775	0.22	-1.3
2,811,092	+		AO353_12775	0.22	-0.0
2,811,092	+		AO353_12775	0.22	+2.0
2,811,092	+		AO353_12775	0.22	-0.5
2,811,092	+		AO353_12775	0.22	+3.6
2,811,092	+		AO353_12775	0.22	+1.5
2,811,092	+		AO353_12775	0.22	-0.0
2,811,093	-		AO353_12775	0.22	-0.0
2,811,093	-		AO353_12775	0.22	-0.3
2,811,093	-		AO353_12775	0.22	-2.3
2,811,093	-		AO353_12775	0.22	-0.3
2,811,093	-		AO353_12775	0.22	+1.4
2,811,093	-		AO353_12775	0.22	-1.3
2,811,093	-		AO353_12775	0.22	-0.2
2,811,093	-		AO353_12775	0.22	-2.4
2,811,093	-		AO353_12775	0.22	-1.0
2,811,093	-		AO353_12775	0.22	+1.3
2,811,116	+		AO353_12775	0.22	+0.3
2,811,117	-		AO353_12775	0.22	-0.3
2,811,117	-		AO353_12775	0.22	-1.5
2,811,194	-		AO353_12775	0.25	+2.3
2,811,199	-		AO353_12775	0.25	+1.0
2,811,199	-		AO353_12775	0.25	-1.3
2,811,201	+		AO353_12775	0.25	-0.3
2,811,202	-		AO353_12775	0.25	+0.7
2,811,202	-		AO353_12775	0.25	+0.3
2,811,202	-		AO353_12775	0.25	+0.3
2,811,281	+		AO353_12775	0.27	-0.7
2,811,281	+		AO353_12775	0.27	-1.4
2,811,281	+		AO353_12775	0.27	-2.3
2,811,281	+		AO353_12775	0.27	-1.4
2,811,281	+		AO353_12775	0.27	+1.3
2,811,282	-		AO353_12775	0.27	+2.8
2,811,282	-		AO353_12775	0.27	+1.3
2,811,282	-		AO353_12775	0.27	+0.3
2,811,282	-		AO353_12775	0.27	+1.5
2,811,282	-		AO353_12775	0.27	+1.7
2,811,282	-		AO353_12775	0.27	+0.3
2,811,287	+		AO353_12775	0.28	+2.0
2,811,287	+		AO353_12775	0.28	+1.6
2,811,288	-		AO353_12775	0.28	+0.7
2,811,288	-		AO353_12775	0.28	+2.9
2,811,288	-		AO353_12775	0.28	-0.5
2,811,288	-		AO353_12775	0.28	-1.2
2,811,309	-		AO353_12775	0.28	+0.7
2,811,344	+		AO353_12775	0.29	-0.7
2,811,344	+		AO353_12775	0.29	+2.0
2,811,344	+		AO353_12775	0.29	-0.5
2,811,344	+		AO353_12775	0.29	+0.7
2,811,344	+		AO353_12775	0.29	-1.3
2,811,344	+		AO353_12775	0.29	-2.0
2,811,345	-		AO353_12775	0.29	-0.5
2,811,345	-		AO353_12775	0.29	-0.9
2,811,345	-		AO353_12775	0.29	-0.0
2,811,345	-		AO353_12775	0.29	-1.8
2,811,345	-		AO353_12775	0.29	-1.0
2,811,572	+		AO353_12775	0.36	-1.7
2,811,572	+		AO353_12775	0.36	-0.7
2,811,572	+		AO353_12775	0.36	-2.4
2,811,573	-		AO353_12775	0.36	-0.7
2,811,573	-		AO353_12775	0.36	-0.3
2,811,614	+		AO353_12775	0.37	-0.3
2,811,615	-		AO353_12775	0.37	-0.7
2,811,615	-		AO353_12775	0.37	-0.7
2,811,615	-		AO353_12775	0.37	+2.3
2,811,615	-		AO353_12775	0.37	+1.4
2,811,615	-		AO353_12775	0.37	-0.7
2,811,615	-		AO353_12775	0.37	-1.8
2,811,615	-		AO353_12775	0.37	+1.3
2,811,615	-		AO353_12775	0.37	-1.3
2,811,615	-		AO353_12775	0.37	-1.4
2,811,620	+		AO353_12775	0.37	+1.5
2,811,620	+		AO353_12775	0.37	+0.3
2,811,620	+		AO353_12775	0.37	+2.3
2,811,621	-		AO353_12775	0.38	+0.3
2,811,667	+		AO353_12775	0.39	+0.7
2,811,667	+		AO353_12775	0.39	+1.8
2,811,667	+		AO353_12775	0.39	-0.7
2,811,667	+		AO353_12775	0.39	-1.5
2,811,667	+		AO353_12775	0.39	-0.5
2,811,667	+		AO353_12775	0.39	+3.0
2,811,667	+		AO353_12775	0.39	-0.3
2,811,668	-		AO353_12775	0.39	+0.3
2,811,668	-		AO353_12775	0.39	+0.3
2,811,668	-		AO353_12775	0.39	-2.5
2,811,668	-		AO353_12775	0.39	+2.3
2,811,668	-		AO353_12775	0.39	-1.2
2,811,759	-		AO353_12775	0.42	-1.7
2,811,759	-		AO353_12775	0.42	+1.3
2,811,787	+		AO353_12775	0.42	+0.6
2,811,787	+		AO353_12775	0.42	-1.6
2,811,787	+		AO353_12775	0.42	+2.0
2,811,787	+		AO353_12775	0.42	+0.8
2,811,787	+		AO353_12775	0.42	+0.3
2,811,787	+		AO353_12775	0.42	-1.0
2,811,788	-		AO353_12775	0.43	-0.7
2,811,814	+		AO353_12775	0.43	-0.5
2,811,814	+		AO353_12775	0.43	-0.9
2,811,814	+		AO353_12775	0.43	-1.6
2,811,814	+		AO353_12775	0.43	+0.9
2,811,815	-		AO353_12775	0.43	-0.0
2,811,815	-		AO353_12775	0.43	-0.4
2,811,815	-		AO353_12775	0.43	-0.3
2,811,815	-		AO353_12775	0.43	-0.3
2,811,815	-		AO353_12775	0.43	+1.7
2,811,850	+		AO353_12775	0.44	-0.5
2,811,946	+		AO353_12775	0.47	+1.3
2,811,946	+		AO353_12775	0.47	-0.5
2,811,946	+		AO353_12775	0.47	+1.6
2,811,947	-		AO353_12775	0.47	-0.3
2,811,962	+		AO353_12775	0.48	+0.3
2,811,962	+		AO353_12775	0.48	-1.6
2,811,962	+		AO353_12775	0.48	-0.3
2,811,962	+		AO353_12775	0.48	+1.2
2,811,962	+		AO353_12775	0.48	-0.9
2,811,962	+		AO353_12775	0.48	-0.7
2,811,962	+		AO353_12775	0.48	-0.3
2,811,962	+		AO353_12775	0.48	+1.3
2,811,962	+		AO353_12775	0.48	-0.5
2,811,962	+		AO353_12775	0.48	+2.0
2,811,963	-		AO353_12775	0.48	-1.0
2,811,963	-		AO353_12775	0.48	-2.2
2,811,963	-		AO353_12775	0.48	-1.5
2,811,963	-		AO353_12775	0.48	+1.0
2,811,963	-		AO353_12775	0.48	+1.1
2,811,963	-		AO353_12775	0.48	-0.7
2,812,179	-		AO353_12775	0.54	+1.3
2,812,184	+		AO353_12775	0.54	-0.9
2,812,184	+		AO353_12775	0.54	+2.3
2,812,184	+		AO353_12775	0.54	-0.5
2,812,184	+		AO353_12775	0.54	-0.4
2,812,184	+		AO353_12775	0.54	-1.8
2,812,184	+		AO353_12775	0.54	-0.4
2,812,184	+		AO353_12775	0.54	+1.3
2,812,184	+		AO353_12775	0.54	-2.0
2,812,184	+		AO353_12775	0.54	-2.0
2,812,184	+		AO353_12775	0.54	-2.1
2,812,184	+		AO353_12775	0.54	+0.5
2,812,185	-		AO353_12775	0.54	-0.5
2,812,185	-		AO353_12775	0.54	+0.7
2,812,185	-		AO353_12775	0.54	-0.3
2,812,185	-		AO353_12775	0.54	+1.7
2,812,185	-		AO353_12775	0.54	+2.7
2,812,185	-		AO353_12775	0.54	-0.5
2,812,185	-		AO353_12775	0.54	-0.3
2,812,185	-		AO353_12775	0.54	-0.3
2,812,185	-		AO353_12775	0.54	+0.3
2,812,185	-		AO353_12775	0.54	+1.1
2,812,185	-		AO353_12775	0.54	-1.5
2,812,185	-		AO353_12775	0.54	-1.8
2,812,185	-		AO353_12775	0.54	+1.3
2,812,185	-		AO353_12775	0.54	-0.9
2,812,185	-		AO353_12775	0.54	+0.9
2,812,185	-		AO353_12775	0.54	+4.0
2,812,185	-		AO353_12775	0.54	+1.0
2,812,185	-		AO353_12775	0.54	-1.8
2,812,581	+		AO353_12775	0.66	-1.0
2,812,589	+		AO353_12775	0.66	-0.7
2,812,589	+		AO353_12775	0.66	+0.7
2,812,589	+		AO353_12775	0.66	-0.0
2,812,589	+		AO353_12775	0.66	-0.0
2,812,589	+		AO353_12775	0.66	-2.0
2,812,590	-		AO353_12775	0.66	-0.5
2,812,590	-		AO353_12775	0.66	-0.6
2,812,590	-		AO353_12775	0.66	+0.3
2,812,590	-		AO353_12775	0.66	+4.0
2,812,590	-		AO353_12775	0.66	-1.9
2,812,590	-		AO353_12775	0.66	-0.3
2,812,715	+		AO353_12775	0.70	-1.5
2,812,715	+		AO353_12775	0.70	+0.3
2,812,715	+		AO353_12775	0.70	-0.0
2,812,716	-		AO353_12775	0.70	+0.7
2,812,716	-		AO353_12775	0.70	-2.0
2,812,716	-		AO353_12775	0.70	-1.0
2,812,716	-		AO353_12775	0.70	-1.5
2,812,716	-		AO353_12775	0.70	+0.7
2,812,866	-		AO353_12775	0.75	+3.7
2,812,866	-		AO353_12775	0.75	-0.9
2,812,866	-		AO353_12775	0.75	+0.7
2,812,866	-		AO353_12775	0.75	-2.0
2,813,504	+				+1.3
2,813,505	-				-0.1
2,813,505	-				+1.0
2,813,505	-				-0.5
2,813,674	+				-1.4
2,813,674	+				-0.3
2,813,675	-				-0.9
2,813,675	-				-0.3
2,813,675	-				-0.5
2,813,677	+				-0.5
2,813,689	+				+3.2
2,813,690	-				-1.1
2,813,690	-				+0.3
2,813,690	-				-0.9
2,813,713	-				+1.6
2,813,713	-				+1.9
2,813,748	+				-1.5
2,813,749	-				+0.4
2,813,749	-				+1.9
2,813,749	-				+1.0
2,813,749	-				+0.3
2,813,848	+				-0.3
2,813,849	-				+0.5
2,813,849	-				+0.3
2,813,849	-				-1.5
2,814,086	+		AO353_12780	0.19	-0.1
2,814,118	+		AO353_12780	0.21	-1.1
2,814,118	+		AO353_12780	0.21	+0.7
2,814,118	+		AO353_12780	0.21	+1.3
2,814,118	+		AO353_12780	0.21	+0.7
2,814,118	+		AO353_12780	0.21	+0.3
2,814,118	+		AO353_12780	0.21	-0.7
2,814,118	+		AO353_12780	0.21	-0.1
2,814,118	+		AO353_12780	0.21	-0.7
2,814,119	-		AO353_12780	0.21	+1.4
2,814,119	-		AO353_12780	0.21	-1.1
2,814,119	-		AO353_12780	0.21	+0.9
2,814,119	-		AO353_12780	0.21	-1.1
2,814,119	-		AO353_12780	0.21	+0.0
2,814,119	-		AO353_12780	0.21	-1.1
2,814,122	-		AO353_12780	0.22	-0.2
2,814,237	+		AO353_12780	0.28	-0.9
2,814,402	+		AO353_12780	0.38	+1.5
2,814,402	+		AO353_12780	0.38	-0.3
2,814,402	+		AO353_12780	0.38	+1.9
2,814,402	+		AO353_12780	0.38	+1.2
2,814,403	-		AO353_12780	0.38	-0.1
2,814,403	-		AO353_12780	0.38	-0.9
2,814,403	-		AO353_12780	0.38	+3.4
2,814,487	+		AO353_12780	0.42	-0.3
2,814,488	-		AO353_12780	0.43	-1.2
2,814,488	-		AO353_12780	0.43	-1.3
2,814,488	-		AO353_12780	0.43	+0.7
2,814,488	-		AO353_12780	0.43	-0.5
2,814,649	+		AO353_12780	0.52	+1.8
2,814,649	+		AO353_12780	0.52	-0.1
2,814,649	+		AO353_12780	0.52	+1.7
2,814,649	+		AO353_12780	0.52	+4.6
2,814,649	+		AO353_12780	0.52	-0.7
2,814,649	+		AO353_12780	0.52	-2.4
2,814,649	+		AO353_12780	0.52	+1.9
2,814,649	+		AO353_12780	0.52	+2.6
2,814,650	-		AO353_12780	0.52	+2.7
2,814,650	-		AO353_12780	0.52	-1.5
2,814,650	-		AO353_12780	0.52	-0.7
2,814,650	-		AO353_12780	0.52	-0.7
2,814,650	-		AO353_12780	0.52	-1.7
2,814,650	-		AO353_12780	0.52	-0.5