Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12185

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,675,942	+		AO353_12180	0.72	+1.3
2,676,093	+		AO353_12180	0.81	-0.3
2,676,446	-				-1.5
2,676,446	-				+0.7
2,676,446	-				-1.2
2,676,446	-				-0.3
2,676,509	+				-0.5
2,676,510	-				-0.6
2,676,550	+				-1.9
2,676,551	-				+3.0
2,676,551	-				+0.4
2,676,617	+		AO353_12185	0.13	-2.7
2,676,617	+		AO353_12185	0.13	+1.5
2,676,617	+		AO353_12185	0.13	-0.7
2,676,618	-		AO353_12185	0.13	-1.0
2,676,618	-		AO353_12185	0.13	+0.7
2,676,618	-		AO353_12185	0.13	-1.7
2,676,618	-		AO353_12185	0.13	-1.6
2,676,618	-		AO353_12185	0.13	-2.3
2,676,627	-		AO353_12185	0.15	-1.2
2,676,666	+		AO353_12185	0.24	+0.3
2,676,666	+		AO353_12185	0.24	+2.2
2,676,667	-		AO353_12185	0.24	-1.6
2,676,683	+		AO353_12185	0.28	-0.7
2,676,683	+		AO353_12185	0.28	-0.7
2,676,684	-		AO353_12185	0.28	-0.5
2,676,687	+		AO353_12185	0.29	-0.3
2,676,687	+		AO353_12185	0.29	-0.7
2,676,687	+		AO353_12185	0.29	-1.2
2,676,687	+		AO353_12185	0.29	-1.2
2,676,687	+		AO353_12185	0.29	-1.2
2,676,688	-		AO353_12185	0.29	-0.9
2,676,688	-		AO353_12185	0.29	-1.4
2,676,688	-		AO353_12185	0.29	-0.3
2,676,688	-		AO353_12185	0.29	-1.3
2,676,688	-		AO353_12185	0.29	-1.5
2,676,705	+		AO353_12185	0.33	-0.0
2,676,706	-		AO353_12185	0.33	-0.9
2,676,706	-		AO353_12185	0.33	-1.4
2,676,706	-		AO353_12185	0.33	-2.3
2,676,706	-		AO353_12185	0.33	+2.9
2,676,716	+		AO353_12185	0.35	-2.9
2,676,716	+		AO353_12185	0.35	-1.3
2,676,716	+		AO353_12185	0.35	-0.9
2,676,717	-		AO353_12185	0.35	-0.7
2,676,773	+		AO353_12185	0.48	+0.3
2,676,773	+		AO353_12185	0.48	+2.3
2,676,773	+		AO353_12185	0.48	+0.7
2,676,773	+		AO353_12185	0.48	+0.2
2,676,773	+		AO353_12185	0.48	-2.0
2,676,774	-		AO353_12185	0.48	-2.1
2,676,774	-		AO353_12185	0.48	+1.4
2,676,774	-		AO353_12185	0.48	-0.5
2,676,774	-		AO353_12185	0.48	-0.5
2,676,774	-		AO353_12185	0.48	-0.2
2,676,774	-		AO353_12185	0.48	+2.9
2,676,938	+		AO353_12185	0.86	-1.5
2,676,938	+		AO353_12185	0.86	+0.3
2,676,938	+		AO353_12185	0.86	-0.3
2,676,938	+		AO353_12185	0.86	-0.7
2,676,938	+		AO353_12185	0.86	-1.4
2,676,938	+		AO353_12185	0.86	-1.6
2,676,939	-		AO353_12185	0.86	-0.3
2,676,939	-		AO353_12185	0.86	-1.2
2,676,939	-		AO353_12185	0.86	+1.3
2,676,939	-		AO353_12185	0.86	-0.5
2,676,939	-		AO353_12185	0.86	+1.4
2,676,939	-		AO353_12185	0.86	+0.7
2,676,939	-		AO353_12185	0.86	+1.5
2,677,007	+				-0.7
2,677,008	-				-1.9
2,677,035	+				+0.5
2,677,085	+				-0.3
2,677,085	+				+1.2
2,677,085	+				-0.2
2,677,085	+				-0.2
2,677,085	+				-1.5
2,677,086	-				-1.4
2,677,086	-				-0.3
2,677,086	-				-1.4
2,677,086	-				-1.9
2,677,086	-				-0.7
2,677,151	-				-0.9
2,677,151	-				+0.3
2,677,195	+				+4.6
2,677,195	+				-0.3
2,677,195	+				-1.4
2,677,195	+				-0.9
2,677,195	+				+2.7
2,677,195	+				-0.6
2,677,196	-				+0.4
2,677,196	-				-2.3
2,677,196	-				+0.8
2,677,196	-				-1.6
2,677,196	-				-2.5
2,677,196	-				+2.3
2,677,196	-				-0.3
2,677,196	-				+2.0
2,677,196	-				+2.3
2,677,196	-				-2.3
2,677,214	+				+3.2
2,677,214	+				-0.9
2,677,215	-				-0.3
2,677,215	-				+2.5
2,677,215	-				+1.9
2,677,249	-				+3.5
2,677,249	-				-0.7
2,677,249	-				-0.7
2,677,270	-				-0.9
2,677,270	-				-0.5
2,677,270	-				+0.7
2,677,321	+				+1.8
2,677,321	+				+1.1
2,677,321	+				-1.0
2,677,321	+				+0.7
2,677,321	+				+0.6
2,677,321	+				-1.6
2,677,321	+				-0.9
2,677,321	+				+2.5
2,677,321	+				+0.3
2,677,322	-				-1.3
2,677,322	-				-1.5
2,677,322	-				-1.3
2,677,322	-				-2.0
2,677,322	-				-1.4
2,677,322	-				+0.3
2,677,322	-				+2.0
2,677,322	-				-1.9
2,677,322	-				-1.9
2,677,322	-				-1.7
2,677,322	-				-0.5
2,677,325	+				-0.0
2,677,325	+				-0.3
2,677,325	+				-0.8
2,677,325	+				+1.0
2,677,325	+				+0.3
2,677,325	+				+1.0
2,677,325	+				+0.7
2,677,325	+				+0.3
2,677,325	+				-0.3
2,677,325	+				-0.7
2,677,325	+				-0.0
2,677,326	-				-2.0
2,677,326	-				-1.2
2,677,326	-				-1.2
2,677,326	-				+1.2
2,677,326	-				-1.3
2,677,326	-				+1.7
2,677,326	-				-0.3
2,677,326	-				+1.2
2,677,326	-				-0.7
2,677,326	-				+0.3
2,677,326	-				+0.7
2,677,326	-				-1.3
2,677,326	-				-1.3
2,677,326	-				-0.0
2,677,326	-				+2.5
2,677,326	-				-0.3
2,677,440	-				+1.3
2,677,440	-				-1.4
2,677,463	+				+1.4
2,677,464	-				+0.3
2,677,464	-				+1.5
2,677,464	-				+2.3
2,677,466	+				-1.9
2,677,466	+				-1.5
2,677,466	+				-1.2
2,677,466	+				-2.3
2,677,466	+				-1.4
2,677,466	+				+1.0
2,677,466	+				-0.5
2,677,466	+				-1.2
2,677,467	-				-0.7
2,677,467	-				-0.8
2,677,467	-				-0.0
2,677,467	-				-0.5
2,677,503	-		AO353_12190	0.10	+2.1
2,677,503	-		AO353_12190	0.10	-0.6
2,677,503	-		AO353_12190	0.10	-0.0
2,677,691	-		AO353_12190	0.18	+1.5
2,677,697	+		AO353_12190	0.18	+1.7
2,677,907	+		AO353_12190	0.27	-1.4
2,677,907	+		AO353_12190	0.27	-0.0
2,677,907	+		AO353_12190	0.27	+0.3
2,677,907	+		AO353_12190	0.27	+4.2
2,677,907	+		AO353_12190	0.27	-0.0
2,677,907	+		AO353_12190	0.27	+0.3
2,677,907	+		AO353_12190	0.27	-0.3
2,677,907	+		AO353_12190	0.27	-1.5
2,677,908	-		AO353_12190	0.27	-0.5
2,677,908	-		AO353_12190	0.27	-0.3
2,677,908	-		AO353_12190	0.27	-1.8
2,677,908	-		AO353_12190	0.27	+2.0
2,677,908	-		AO353_12190	0.27	-0.5
2,677,908	-		AO353_12190	0.27	+2.6