Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11720

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,585,765	-				+1.6
2,585,875	+				+0.3
2,585,876	-				-1.5
2,585,876	-				-1.3
2,586,266	+		AO353_11715	0.45	+0.0
2,586,266	+		AO353_11715	0.45	-0.9
2,586,266	+		AO353_11715	0.45	+1.9
2,586,267	-		AO353_11715	0.45	-0.3
2,586,267	-		AO353_11715	0.45	+0.3
2,586,267	-		AO353_11715	0.45	+1.3
2,586,326	+		AO353_11715	0.52	-1.1
2,586,326	+		AO353_11715	0.52	+2.2
2,586,326	+		AO353_11715	0.52	+4.1
2,586,327	-		AO353_11715	0.52	+0.3
2,586,469	+		AO353_11715	0.69	-1.7
2,586,470	-		AO353_11715	0.69	+0.7
2,586,470	-		AO353_11715	0.69	+0.6
2,586,501	+		AO353_11715	0.73	+2.6
2,586,503	+		AO353_11715	0.73	-2.9
2,586,503	+		AO353_11715	0.73	+3.0
2,586,503	+		AO353_11715	0.73	+0.9
2,586,503	+		AO353_11715	0.73	+1.9
2,586,503	+		AO353_11715	0.73	-1.4
2,586,503	+		AO353_11715	0.73	+3.4
2,586,503	+		AO353_11715	0.73	-1.6
2,586,503	+		AO353_11715	0.73	-2.0
2,586,503	+		AO353_11715	0.73	-0.7
2,586,504	-		AO353_11715	0.73	-1.4
2,586,504	-		AO353_11715	0.73	+1.1
2,586,504	-		AO353_11715	0.73	-2.7
2,586,504	-		AO353_11715	0.73	+0.4
2,586,504	-		AO353_11715	0.73	+1.7
2,586,504	-		AO353_11715	0.73	+0.1
2,586,504	-		AO353_11715	0.73	-0.9
2,586,504	-		AO353_11715	0.73	+1.0
2,586,504	-		AO353_11715	0.73	+0.3
2,586,628	+		AO353_11715	0.88	+0.0
2,586,628	+		AO353_11715	0.88	-1.1
2,586,629	-		AO353_11715	0.88	-0.7
2,586,629	-		AO353_11715	0.88	-0.3
2,586,717	-				-2.2
2,586,717	-				+0.3
2,586,717	-				+1.2
2,586,777	+				+1.0
2,586,777	+				-1.2
2,586,777	+				-0.4
2,586,778	-				+3.1
2,586,778	-				-1.0
2,586,778	-				+3.3
2,586,778	-				+0.0
2,586,928	-		AO353_11720	0.26	-0.5
2,586,928	-		AO353_11720	0.26	-1.1
2,587,196	+		AO353_11720	0.59	-0.5
2,587,196	+		AO353_11720	0.59	+0.0
2,587,196	+		AO353_11720	0.59	-0.8
2,587,197	-		AO353_11720	0.60	-0.2
2,587,197	-		AO353_11720	0.60	+0.3
2,587,197	-		AO353_11720	0.60	+0.0
2,587,206	+		AO353_11720	0.61	-1.7
2,587,440	+				+2.7
2,587,481	-				+0.2
2,587,539	+				+0.3
2,587,539	+				+1.1
2,587,539	+				+1.4
2,587,539	+				+1.8
2,587,540	-				+0.8
2,587,540	-				-2.6
2,587,540	-				+1.3
2,587,540	-				+1.1
2,587,540	-				-1.0
2,587,547	+				-1.6
2,587,547	+				+0.3
2,587,547	+				-2.4
2,587,547	+				-1.0
2,587,547	+				-2.0
2,587,547	+				+0.8
2,587,547	+				+2.1
2,587,547	+				-1.2
2,587,547	+				+2.9
2,587,547	+				+0.3
2,587,548	-				-1.7
2,587,548	-				-0.3
2,587,548	-				-2.0
2,587,548	-				+1.9
2,587,548	-				-1.4
2,587,548	-				-0.7
2,587,548	-				+2.0
2,587,548	-				+2.3
2,587,548	-				-1.6
2,587,548	-				+0.8
2,587,562	+				+1.3
2,587,562	+				-1.0
2,587,562	+				-2.9
2,587,562	+				+1.4
2,587,563	-				+0.0
2,587,563	-				+0.0
2,587,563	-				-1.4
2,587,563	-				+0.0
2,587,563	-				-1.0
2,587,571	+				+0.8
2,587,571	+				+0.3
2,587,571	+				+0.8
2,587,571	+				-1.2
2,587,571	+				+0.8
2,587,572	-				+0.0
2,587,685	+		AO353_11725	0.15	+2.3
2,587,979	+		AO353_11725	0.46	-0.7
2,587,979	+		AO353_11725	0.46	+2.3
2,587,979	+		AO353_11725	0.46	-0.7
2,587,979	+		AO353_11725	0.46	+0.0
2,587,979	+		AO353_11725	0.46	+3.0
2,587,979	+		AO353_11725	0.46	+0.0
2,587,979	+		AO353_11725	0.46	-1.0
2,587,979	+		AO353_11725	0.46	+1.8
2,587,979	+		AO353_11725	0.46	-0.7
2,587,979	+		AO353_11725	0.46	-0.8
2,587,979	+		AO353_11725	0.46	-0.2
2,587,979	+		AO353_11725	0.46	-1.0
2,587,979	-		AO353_11725	0.46	-1.6
2,587,980	-		AO353_11725	0.46	-1.5
2,587,980	-		AO353_11725	0.46	+0.0
2,587,980	-		AO353_11725	0.46	+0.0
2,587,980	-		AO353_11725	0.46	-1.7
2,587,980	-		AO353_11725	0.46	-0.2
2,587,980	-		AO353_11725	0.46	-1.6
2,587,980	-		AO353_11725	0.46	+0.7
2,588,096	+		AO353_11725	0.57	+0.0
2,588,096	+		AO353_11725	0.57	-1.6
2,588,096	+		AO353_11725	0.57	-0.8
2,588,097	-		AO353_11725	0.58	-0.1
2,588,097	-		AO353_11725	0.58	+1.3
2,588,097	-		AO353_11725	0.58	+0.3
2,588,276	+		AO353_11725	0.76	+0.4
2,588,420	+				+0.8
2,588,420	+				-1.2
2,588,421	-				+0.8
2,588,492	-				+1.9