Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10955

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,389,786	+		AO353_10945	0.77	-0.7
2,389,786	+		AO353_10945	0.77	-0.7
2,389,787	-		AO353_10945	0.77	-0.4
2,389,787	-		AO353_10945	0.77	+0.0
2,389,828	-		AO353_10945	0.84	+0.0
2,389,924	+				+1.6
2,389,924	+				-1.4
2,389,924	+				+1.1
2,389,924	+				+2.8
2,389,925	-				-1.6
2,389,925	-				+0.3
2,390,003	+				+0.3
2,390,003	+				+1.3
2,390,004	-				+0.9
2,390,004	-				-1.8
2,390,004	-				+1.6
2,390,017	+				+2.1
2,390,017	+				+2.5
2,390,017	+				+2.2
2,390,018	-				-1.6
2,390,018	-				+2.1
2,390,048	-				-1.2
2,390,052	+				-1.3
2,390,052	+				+3.5
2,390,052	+				-0.5
2,390,053	-				+1.3
2,390,053	-				-1.7
2,390,053	-				+0.2
2,390,053	-				-0.2
2,390,053	-				-1.2
2,390,053	-				-1.7
2,390,053	-				+0.0
2,390,060	+				+0.4
2,390,060	+				+0.3
2,390,061	-				-1.1
2,390,061	-				+0.8
2,390,061	-				+0.3
2,390,061	-				-1.4
2,390,121	+				+1.8
2,390,121	+				-0.2
2,390,121	+				+0.8
2,390,122	-				+1.3
2,390,122	-				-1.8
2,390,122	-				-0.8
2,390,122	-				-0.2
2,390,122	-				-1.0
2,390,133	-				-0.5
2,390,133	-				-0.7
2,390,133	-				-1.6
2,390,133	-				-1.2
2,390,133	-				+0.8
2,390,177	+				+0.8
2,390,177	+				-0.9
2,390,177	+				-2.2
2,390,178	-				-0.2
2,390,220	+		AO353_10950	0.15	+0.8
2,390,220	+		AO353_10950	0.15	+0.2
2,390,220	+		AO353_10950	0.15	+0.3
2,390,220	+		AO353_10950	0.15	+0.0
2,390,220	+		AO353_10950	0.15	+0.3
2,390,220	+		AO353_10950	0.15	-0.5
2,390,220	+		AO353_10950	0.15	+0.0
2,390,220	+		AO353_10950	0.15	-0.2
2,390,220	+		AO353_10950	0.15	+1.3
2,390,220	+		AO353_10950	0.15	+1.3
2,390,220	+		AO353_10950	0.15	-0.7
2,390,221	-		AO353_10950	0.15	-0.8
2,390,221	-		AO353_10950	0.15	+0.0
2,390,221	-		AO353_10950	0.15	+0.3
2,390,221	-		AO353_10950	0.15	-0.2
2,390,221	-		AO353_10950	0.15	-2.2
2,390,221	-		AO353_10950	0.15	+0.3
2,390,221	-		AO353_10950	0.15	-0.8
2,390,221	-		AO353_10950	0.15	+1.1
2,390,221	-		AO353_10950	0.15	+1.3
2,390,221	-		AO353_10950	0.15	-1.2
2,390,307	+		AO353_10950	0.29	+1.0
2,390,307	+		AO353_10950	0.29	-0.7
2,390,307	+		AO353_10950	0.29	+1.3
2,390,307	+		AO353_10950	0.29	-0.5
2,390,308	-		AO353_10950	0.29	-0.7
2,390,308	-		AO353_10950	0.29	-0.7
2,390,308	-		AO353_10950	0.29	-1.5
2,390,308	-		AO353_10950	0.29	-0.2
2,390,308	-		AO353_10950	0.29	-1.1
2,390,308	-		AO353_10950	0.29	-0.5
2,390,310	-		AO353_10950	0.29	-0.7
2,390,372	+		AO353_10950	0.39	-1.0
2,390,372	+		AO353_10950	0.39	-0.5
2,390,373	-		AO353_10950	0.39	+0.8
2,390,393	+		AO353_10950	0.42	+0.3
2,390,393	+		AO353_10950	0.42	-1.0
2,390,418	+		AO353_10950	0.46	-0.4
2,390,418	+		AO353_10950	0.46	+3.3
2,390,418	+		AO353_10950	0.46	+0.3
2,390,418	+		AO353_10950	0.46	-1.6
2,390,418	+		AO353_10950	0.46	+2.3
2,390,418	+		AO353_10950	0.46	+0.3
2,390,418	+		AO353_10950	0.46	+0.0
2,390,418	+		AO353_10950	0.46	+1.3
2,390,418	+		AO353_10950	0.46	+0.8
2,390,419	-		AO353_10950	0.46	-0.8
2,390,419	-		AO353_10950	0.46	+0.3
2,390,419	-		AO353_10950	0.46	+1.3
2,390,419	-		AO353_10950	0.46	+0.0
2,390,419	-		AO353_10950	0.46	-2.2
2,390,419	-		AO353_10950	0.46	-0.2
2,390,419	-		AO353_10950	0.46	-2.7
2,390,419	-		AO353_10950	0.46	-1.0
2,390,419	-		AO353_10950	0.46	+0.0
2,390,419	-		AO353_10950	0.46	+1.9
2,390,419	-		AO353_10950	0.46	-0.8
2,390,419	-		AO353_10950	0.46	+0.3
2,390,419	-		AO353_10950	0.46	-1.5
2,390,419	-		AO353_10950	0.46	+1.3
2,390,419	-		AO353_10950	0.46	-1.8
2,390,419	-		AO353_10950	0.46	-1.8
2,390,419	-		AO353_10950	0.46	-2.2
2,390,460	-		AO353_10950	0.53	+0.5
2,390,568	+		AO353_10950	0.70	+1.0
2,390,568	+		AO353_10950	0.70	-1.8
2,390,568	+		AO353_10950	0.70	-0.2
2,390,568	+		AO353_10950	0.70	-1.5
2,390,568	+		AO353_10950	0.70	-0.5
2,390,568	+		AO353_10950	0.70	-1.5
2,390,568	+		AO353_10950	0.70	+0.0
2,390,568	+		AO353_10950	0.70	+0.3
2,390,568	+		AO353_10950	0.70	-0.5
2,390,569	-		AO353_10950	0.70	-0.2
2,390,569	-		AO353_10950	0.70	-0.8
2,390,569	-		AO353_10950	0.70	+0.8
2,390,569	-		AO353_10950	0.70	-0.1
2,390,569	-		AO353_10950	0.70	-2.7
2,390,569	-		AO353_10950	0.70	+0.8
2,390,667	+		AO353_10950	0.86	-0.7
2,390,668	-		AO353_10950	0.86	-0.5
2,390,729	-				+2.3
2,390,750	+				-1.7
2,390,750	+				-1.4
2,390,751	-				+3.1
2,390,754	+				+2.0
2,390,754	+				+1.1
2,390,754	+				-1.7
2,390,754	+				+1.5
2,390,754	+				-1.2
2,390,755	-				-2.0
2,390,755	-				+0.8
2,390,755	-				-0.7
2,390,755	-				-2.0
2,390,755	-				-0.2
2,390,755	-				+0.3
2,390,922	+		AO353_10955	0.17	+0.0
2,390,922	+		AO353_10955	0.17	+0.8
2,390,923	-		AO353_10955	0.18	-0.8
2,390,923	-		AO353_10955	0.18	+0.0
2,391,006	+		AO353_10955	0.27	+3.9
2,391,006	+		AO353_10955	0.27	+0.0
2,391,006	+		AO353_10955	0.27	-1.4
2,391,006	+		AO353_10955	0.27	-0.8
2,391,007	-		AO353_10955	0.27	+0.7
2,391,057	+		AO353_10955	0.33	-1.5
2,391,057	+		AO353_10955	0.33	-0.5
2,391,057	+		AO353_10955	0.33	-0.7
2,391,058	-		AO353_10955	0.33	+0.3
2,391,058	-		AO353_10955	0.33	-0.4
2,391,058	-		AO353_10955	0.33	+1.4
2,391,058	-		AO353_10955	0.33	-0.2
2,391,058	-		AO353_10955	0.33	+0.3
2,391,058	-		AO353_10955	0.33	+1.3
2,391,058	-		AO353_10955	0.33	-1.0
2,391,058	-		AO353_10955	0.33	+0.8
2,391,058	-		AO353_10955	0.33	-0.8
2,391,103	-		AO353_10955	0.38	-2.1
2,391,108	+		AO353_10955	0.39	-0.7
2,391,108	+		AO353_10955	0.39	+0.3
2,391,109	-		AO353_10955	0.39	-0.5
2,391,109	-		AO353_10955	0.39	+0.3
2,391,109	-		AO353_10955	0.39	-1.8
2,391,109	-		AO353_10955	0.39	+0.9
2,391,321	+		AO353_10955	0.63	-2.3
2,391,321	+		AO353_10955	0.63	+0.9
2,391,321	+		AO353_10955	0.63	+0.9
2,391,321	+		AO353_10955	0.63	+0.2
2,391,321	+		AO353_10955	0.63	+1.4
2,391,322	-		AO353_10955	0.63	-1.5
2,391,322	-		AO353_10955	0.63	-1.9
2,391,322	-		AO353_10955	0.63	+0.0
2,391,345	+		AO353_10955	0.66	+1.9
2,391,345	+		AO353_10955	0.66	-1.7
2,391,345	+		AO353_10955	0.66	-0.5
2,391,345	+		AO353_10955	0.66	+2.3
2,391,345	+		AO353_10955	0.66	-1.1
2,391,345	+		AO353_10955	0.66	-1.4
2,391,345	+		AO353_10955	0.66	-0.2
2,391,345	+		AO353_10955	0.66	-1.5
2,391,345	+		AO353_10955	0.66	-0.8
2,391,346	-		AO353_10955	0.66	-1.5
2,391,346	-		AO353_10955	0.66	-0.9
2,391,346	-		AO353_10955	0.66	-1.1
2,391,346	-		AO353_10955	0.66	-3.1
2,391,346	-		AO353_10955	0.66	-1.1
2,391,346	-		AO353_10955	0.66	+1.2
2,391,488	+		AO353_10955	0.82	-0.8
2,391,488	+		AO353_10955	0.82	+1.5
2,391,488	+		AO353_10955	0.82	-3.1
2,391,488	+		AO353_10955	0.82	+0.8
2,391,488	+		AO353_10955	0.82	-0.5
2,391,488	+		AO353_10955	0.82	+1.3
2,391,488	+		AO353_10955	0.82	+1.4
2,391,489	-		AO353_10955	0.82	-1.0
2,391,489	-		AO353_10955	0.82	-0.8
2,391,489	-		AO353_10955	0.82	+0.1
2,391,489	-		AO353_10955	0.82	-3.3
2,391,489	-		AO353_10955	0.82	-1.9
2,391,503	+		AO353_10955	0.84	+1.5
2,391,503	+		AO353_10955	0.84	+1.0
2,391,503	+		AO353_10955	0.84	-0.7
2,391,677	+				-2.1
2,391,677	+				+0.2
2,391,677	+				-0.2
2,391,678	-				+0.9
2,391,678	-				+0.0
2,391,678	-				+3.8
2,391,688	+				-1.2
2,391,689	-				+0.8
2,391,842	-				-1.2
2,392,200	+		AO353_10960	0.26	-0.1
2,392,200	+		AO353_10960	0.26	+0.0
2,392,200	+		AO353_10960	0.26	-1.2
2,392,200	+		AO353_10960	0.26	+1.3
2,392,200	+		AO353_10960	0.26	+0.0
2,392,201	-		AO353_10960	0.26	-1.3
2,392,201	-		AO353_10960	0.26	+2.6
2,392,201	-		AO353_10960	0.26	-0.2
2,392,201	-		AO353_10960	0.26	+1.2
2,392,201	-		AO353_10960	0.26	-0.8
2,392,251	+		AO353_10960	0.28	-1.2
2,392,251	+		AO353_10960	0.28	-1.1
2,392,252	-		AO353_10960	0.28	+1.0
2,392,309	+		AO353_10960	0.31	-0.2
2,392,309	+		AO353_10960	0.31	-0.5
2,392,310	-		AO353_10960	0.31	+2.4
2,392,310	-		AO353_10960	0.31	-0.5
2,392,312	+		AO353_10960	0.31	-0.5
2,392,313	-		AO353_10960	0.31	+1.0
2,392,313	-		AO353_10960	0.31	+1.1
2,392,323	+		AO353_10960	0.32	+1.5
2,392,323	+		AO353_10960	0.32	+0.8
2,392,323	+		AO353_10960	0.32	+0.8
2,392,323	+		AO353_10960	0.32	-1.1
2,392,324	-		AO353_10960	0.32	+0.0
2,392,324	-		AO353_10960	0.32	-1.7
2,392,324	-		AO353_10960	0.32	+0.0
2,392,514	-		AO353_10960	0.41	-0.8
2,392,514	-		AO353_10960	0.41	+0.3
2,392,533	+		AO353_10960	0.41	-0.8
2,392,533	+		AO353_10960	0.41	+0.0
2,392,636	-		AO353_10960	0.46	-0.5
2,392,643	-		AO353_10960	0.47	+0.0
2,392,643	-		AO353_10960	0.47	+1.3