Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10180

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,226,508	-		AO353_10175	0.49	+0.6
2,226,721	+		AO353_10175	0.60	+0.7
2,226,721	+		AO353_10175	0.60	-0.0
2,226,721	+		AO353_10175	0.60	-0.5
2,226,721	+		AO353_10175	0.60	+0.3
2,226,721	+		AO353_10175	0.60	-1.1
2,226,722	-		AO353_10175	0.60	-1.8
2,226,722	-		AO353_10175	0.60	+2.7
2,226,722	-		AO353_10175	0.60	+1.3
2,226,722	-		AO353_10175	0.60	+0.4
2,226,722	-		AO353_10175	0.60	+1.9
2,226,722	-		AO353_10175	0.60	+2.2
2,226,722	-		AO353_10175	0.60	-0.0
2,226,722	-		AO353_10175	0.60	+2.3
2,226,722	-		AO353_10175	0.60	-0.7
2,226,722	-		AO353_10175	0.60	-1.1
2,226,722	-		AO353_10175	0.60	-0.8
2,226,722	-		AO353_10175	0.60	-0.8
2,226,722	-		AO353_10175	0.60	+2.5
2,226,876	+		AO353_10175	0.68	-0.5
2,226,877	-		AO353_10175	0.68	-1.9
2,227,023	-		AO353_10175	0.76	-0.4
2,227,023	-		AO353_10175	0.76	-0.5
2,227,023	-		AO353_10175	0.76	-1.0
2,227,227	+		AO353_10175	0.86	-0.3
2,227,227	+		AO353_10175	0.86	-1.4
2,227,228	-		AO353_10175	0.87	+2.2
2,227,228	-		AO353_10175	0.87	-2.0
2,227,228	-		AO353_10175	0.87	-1.0
2,227,228	-		AO353_10175	0.87	-1.3
2,227,228	-		AO353_10175	0.87	-1.0
2,227,228	-		AO353_10175	0.87	+1.5
2,227,228	-		AO353_10175	0.87	+0.4
2,227,270	+		AO353_10175	0.89	+2.3
2,227,270	+		AO353_10175	0.89	+0.5
2,227,270	+		AO353_10175	0.89	-1.5
2,227,271	-		AO353_10175	0.89	-1.6
2,227,271	-		AO353_10175	0.89	-0.7
2,227,326	+				+1.3
2,227,326	+				+0.7
2,227,326	+				+1.5
2,227,327	-				+0.7
2,227,327	-				-1.6
2,227,327	-				+2.4
2,227,327	-				-0.3
2,227,522	+				+0.9
2,227,522	+				+0.3
2,227,523	-				-2.0
2,227,570	+				+0.3
2,227,570	+				+0.9
2,227,570	+				+1.7
2,227,571	-				+0.7
2,227,571	-				+1.8
2,227,571	-				+1.0
2,227,571	-				-0.3
2,227,571	-				+1.3
2,227,571	-				-1.4
2,227,571	-				+0.7
2,227,581	+				-1.8
2,227,581	+				-0.7
2,227,581	+				-1.1
2,227,756	+		AO353_10180	0.26	+2.3
2,227,756	+		AO353_10180	0.26	+0.9
2,227,756	+		AO353_10180	0.26	-0.3
2,227,756	+		AO353_10180	0.26	-0.4
2,227,756	+		AO353_10180	0.26	-1.0
2,227,756	+		AO353_10180	0.26	-0.5
2,227,756	+		AO353_10180	0.26	+0.3
2,227,756	+		AO353_10180	0.26	+0.6
2,227,757	-		AO353_10180	0.26	+2.1
2,227,757	-		AO353_10180	0.26	+0.7
2,227,757	-		AO353_10180	0.26	-0.3
2,227,757	-		AO353_10180	0.26	-1.0
2,227,757	-		AO353_10180	0.26	+2.5
2,227,757	-		AO353_10180	0.26	-1.0
2,227,757	-		AO353_10180	0.26	+0.3
2,227,777	+		AO353_10180	0.28	-0.7
2,227,777	+		AO353_10180	0.28	-1.8
2,227,777	+		AO353_10180	0.28	-1.4
2,227,777	+		AO353_10180	0.28	-1.8
2,227,778	-		AO353_10180	0.28	+0.4
2,227,778	-		AO353_10180	0.28	-1.3
2,227,778	-		AO353_10180	0.28	-1.0
2,227,778	-		AO353_10180	0.28	+1.3
2,227,778	-		AO353_10180	0.28	-1.0
2,227,778	-		AO353_10180	0.28	-0.3
2,227,792	+		AO353_10180	0.29	-1.1
2,227,793	-		AO353_10180	0.29	+4.1
2,227,793	-		AO353_10180	0.29	-0.5
2,227,793	-		AO353_10180	0.29	-0.3
2,227,793	-		AO353_10180	0.29	-0.0
2,227,895	+		AO353_10180	0.39	+0.3
2,228,103	+		AO353_10180	0.59	-1.7
2,228,104	-		AO353_10180	0.59	+2.0
2,228,104	-		AO353_10180	0.59	+0.7
2,228,121	+		AO353_10180	0.60	-1.1
2,228,121	+		AO353_10180	0.60	+0.3
2,228,121	+		AO353_10180	0.60	+0.6
2,228,122	-		AO353_10180	0.61	-1.4
2,228,122	-		AO353_10180	0.61	-2.6
2,228,122	-		AO353_10180	0.61	-1.0
2,228,172	+		AO353_10180	0.65	-0.0
2,228,173	-		AO353_10180	0.65	-0.3
2,228,461	-				+1.3
2,228,638	+				+2.1
2,228,639	-				+0.6
2,228,639	-				+0.7
2,228,639	-				-0.8
2,228,678	+		AO353_10185	0.14	+2.6
2,228,678	+		AO353_10185	0.14	-1.9
2,228,678	+		AO353_10185	0.14	+1.4
2,228,678	+		AO353_10185	0.14	-0.3
2,228,678	+		AO353_10185	0.14	+1.3
2,228,678	+		AO353_10185	0.14	+0.7
2,228,678	+		AO353_10185	0.14	+3.4
2,228,678	+		AO353_10185	0.14	+2.8
2,228,678	+		AO353_10185	0.14	+1.3
2,228,679	-		AO353_10185	0.14	-0.7
2,228,679	-		AO353_10185	0.14	-0.8
2,228,679	-		AO353_10185	0.14	+0.5
2,228,679	-		AO353_10185	0.14	-0.8
2,228,700	-		AO353_10185	0.16	-3.2
2,228,712	-		AO353_10185	0.17	-0.3
2,228,957	+		AO353_10185	0.40	+0.7
2,228,957	+		AO353_10185	0.40	-2.1
2,228,958	-		AO353_10185	0.40	+2.2
2,228,958	-		AO353_10185	0.40	+0.3
2,228,958	-		AO353_10185	0.40	+0.3
2,228,958	-		AO353_10185	0.40	-0.6
2,229,099	+		AO353_10185	0.54	+0.7
2,229,099	+		AO353_10185	0.54	-0.5
2,229,099	+		AO353_10185	0.54	+1.3
2,229,099	+		AO353_10185	0.54	+0.7
2,229,099	+		AO353_10185	0.54	-3.0
2,229,099	+		AO353_10185	0.54	-1.6
2,229,099	+		AO353_10185	0.54	+2.2
2,229,099	+		AO353_10185	0.54	+0.3
2,229,100	-		AO353_10185	0.54	-0.3
2,229,100	-		AO353_10185	0.54	+2.2
2,229,100	-		AO353_10185	0.54	-1.8
2,229,100	-		AO353_10185	0.54	+1.4
2,229,100	-		AO353_10185	0.54	+1.4
2,229,100	-		AO353_10185	0.54	+1.8
2,229,100	-		AO353_10185	0.54	-0.4
2,229,100	-		AO353_10185	0.54	-0.7
2,229,100	-		AO353_10185	0.54	+0.3
2,229,100	-		AO353_10185	0.54	-1.8
2,229,194	+		AO353_10185	0.63	-1.0
2,229,194	+		AO353_10185	0.63	-0.7
2,229,194	+		AO353_10185	0.63	-0.4
2,229,194	+		AO353_10185	0.63	+1.8
2,229,194	+		AO353_10185	0.63	-1.0
2,229,194	+		AO353_10185	0.63	+2.3
2,229,194	+		AO353_10185	0.63	-1.9
2,229,195	-		AO353_10185	0.63	-1.4
2,229,195	-		AO353_10185	0.63	+0.7
2,229,195	-		AO353_10185	0.63	-0.6
2,229,195	-		AO353_10185	0.63	-0.8
2,229,195	-		AO353_10185	0.63	+1.5
2,229,195	-		AO353_10185	0.63	+2.3
2,229,195	-		AO353_10185	0.63	-0.0
2,229,195	-		AO353_10185	0.63	-0.8
2,229,195	-		AO353_10185	0.63	+0.5
2,229,195	-		AO353_10185	0.63	+2.2
2,229,195	-		AO353_10185	0.63	-0.8