Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10145

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,218,625	-				-1.5
2,218,638	+				-0.5
2,218,638	+				+2.3
2,218,638	+				-1.0
2,218,638	+				+0.7
2,218,639	-				-1.2
2,218,639	-				-0.2
2,218,639	-				-2.0
2,218,639	-				+1.4
2,218,639	-				-0.9
2,218,639	-				-1.0
2,218,639	-				-1.5
2,218,731	+				+1.2
2,218,731	+				-1.3
2,218,731	+				+3.0
2,218,731	+				+2.1
2,218,731	+				-0.6
2,218,732	-				+2.5
2,218,732	-				+0.7
2,218,732	-				+0.5
2,218,732	-				+1.5
2,218,732	-				-2.3
2,218,732	-				-1.0
2,218,732	-				-2.3
2,218,732	-				-0.3
2,218,897	+		AO353_10140	0.20	+2.7
2,218,897	+		AO353_10140	0.20	-0.3
2,218,897	+		AO353_10140	0.20	+0.5
2,218,897	+		AO353_10140	0.20	-0.3
2,218,898	-		AO353_10140	0.20	-0.3
2,218,898	-		AO353_10140	0.20	-0.7
2,218,898	-		AO353_10140	0.20	-1.9
2,218,898	-		AO353_10140	0.20	-0.3
2,218,898	-		AO353_10140	0.20	-0.3
2,218,898	-		AO353_10140	0.20	-1.6
2,218,898	-		AO353_10140	0.20	+1.6
2,218,901	+		AO353_10140	0.20	-0.7
2,218,901	+		AO353_10140	0.20	+1.9
2,218,901	+		AO353_10140	0.20	-0.5
2,218,901	+		AO353_10140	0.20	-1.6
2,218,901	+		AO353_10140	0.20	+3.2
2,218,901	+		AO353_10140	0.20	-1.2
2,218,901	+		AO353_10140	0.20	+3.9
2,218,901	+		AO353_10140	0.20	+1.1
2,218,901	+		AO353_10140	0.20	-0.7
2,218,901	+		AO353_10140	0.20	-2.2
2,218,901	+		AO353_10140	0.20	-0.5
2,218,901	+		AO353_10140	0.20	-2.0
2,218,902	-		AO353_10140	0.20	-1.6
2,218,902	-		AO353_10140	0.20	-0.4
2,218,902	-		AO353_10140	0.20	+0.7
2,218,902	-		AO353_10140	0.20	-0.5
2,218,902	-		AO353_10140	0.20	-1.0
2,218,902	-		AO353_10140	0.20	-0.9
2,218,902	-		AO353_10140	0.20	+0.8
2,219,123	+		AO353_10140	0.45	-1.2
2,219,123	+		AO353_10140	0.45	+0.3
2,219,123	+		AO353_10140	0.45	+0.2
2,219,123	+		AO353_10140	0.45	+0.7
2,219,123	+		AO353_10140	0.45	+1.8
2,219,123	+		AO353_10140	0.45	-1.4
2,219,123	+		AO353_10140	0.45	-0.9
2,219,123	+		AO353_10140	0.45	+1.4
2,219,123	+		AO353_10140	0.45	+1.3
2,219,123	+		AO353_10140	0.45	+0.6
2,219,123	+		AO353_10140	0.45	+0.7
2,219,123	+		AO353_10140	0.45	+1.0
2,219,123	+		AO353_10140	0.45	+1.9
2,219,124	-		AO353_10140	0.46	+0.7
2,219,124	-		AO353_10140	0.46	-1.4
2,219,124	-		AO353_10140	0.46	-1.5
2,219,124	-		AO353_10140	0.46	+0.3
2,219,124	-		AO353_10140	0.46	-0.3
2,219,124	-		AO353_10140	0.46	-0.7
2,219,124	-		AO353_10140	0.46	-0.0
2,219,124	-		AO353_10140	0.46	+3.2
2,219,124	-		AO353_10140	0.46	-0.7
2,219,124	-		AO353_10140	0.46	-0.3
2,219,181	-		AO353_10140	0.52	+1.3
2,219,181	-		AO353_10140	0.52	-1.3
2,219,201	+		AO353_10140	0.54	+1.2
2,219,201	+		AO353_10140	0.54	-1.2
2,219,201	+		AO353_10140	0.54	-1.9
2,219,201	+		AO353_10140	0.54	-1.3
2,219,201	+		AO353_10140	0.54	-1.3
2,219,202	-		AO353_10140	0.54	+0.7
2,219,202	-		AO353_10140	0.54	-0.3
2,219,216	+		AO353_10140	0.56	+3.8
2,219,216	+		AO353_10140	0.56	-0.9
2,219,216	+		AO353_10140	0.56	-2.3
2,219,217	-		AO353_10140	0.56	-0.3
2,219,217	-		AO353_10140	0.56	-1.2
2,219,217	-		AO353_10140	0.56	+0.3
2,219,217	-		AO353_10140	0.56	-1.7
2,219,217	-		AO353_10140	0.56	-0.7
2,219,217	-		AO353_10140	0.56	+1.2
2,219,217	-		AO353_10140	0.56	+3.6
2,219,217	-		AO353_10140	0.56	+0.3
2,219,217	-		AO353_10140	0.56	-2.2
2,219,217	-		AO353_10140	0.56	-1.1
2,219,217	-		AO353_10140	0.56	+0.2
2,219,281	+		AO353_10140	0.63	+2.3
2,219,281	+		AO353_10140	0.63	+2.7
2,219,281	+		AO353_10140	0.63	+2.3
2,219,282	-		AO353_10140	0.63	-1.4
2,219,282	-		AO353_10140	0.63	-0.9
2,219,282	-		AO353_10140	0.63	+1.5
2,219,282	-		AO353_10140	0.63	-0.7
2,219,282	-		AO353_10140	0.63	-2.9
2,219,507	+		AO353_10140	0.89	-0.9
2,219,508	-		AO353_10140	0.89	-1.5
2,219,508	-		AO353_10140	0.89	+0.3
2,219,508	-		AO353_10140	0.89	-2.3
2,219,508	-		AO353_10140	0.89	-1.6
2,219,508	-		AO353_10140	0.89	-1.2
2,219,565	-				+2.2
2,219,565	-				-0.0
2,219,565	-				-0.2
2,219,565	-				-1.8
2,219,565	-				-0.7
2,219,565	-				-1.3
2,219,565	-				+0.9
2,219,565	-				-0.9
2,219,582	+				-1.6
2,219,582	+				-0.5
2,219,582	+				+1.0
2,219,582	+				+0.3
2,219,582	+				-1.7
2,219,582	+				-1.9
2,219,583	-				+1.7
2,219,583	-				+0.7
2,219,583	-				+0.8
2,219,583	-				+0.3
2,219,583	-				-2.2
2,219,583	-				-2.4
2,219,653	+				+1.5
2,219,653	+				-0.7
2,219,653	+				+0.7
2,219,653	+				-1.0
2,219,653	+				-1.9
2,219,654	-				-1.2
2,219,661	+		AO353_10145	0.11	-0.0
2,219,661	+		AO353_10145	0.11	+3.4
2,219,662	-		AO353_10145	0.11	+0.9
2,219,662	-		AO353_10145	0.11	-0.9
2,219,687	+		AO353_10145	0.15	-0.7
2,219,687	+		AO353_10145	0.15	-0.8
2,219,687	+		AO353_10145	0.15	-0.3
2,219,688	-		AO353_10145	0.15	+1.7
2,219,688	-		AO353_10145	0.15	-0.3
2,219,688	-		AO353_10145	0.15	+1.3
2,219,688	-		AO353_10145	0.15	-0.9
2,219,688	-		AO353_10145	0.15	-0.4
2,219,719	+		AO353_10145	0.21	-0.0
2,219,720	-		AO353_10145	0.21	+1.3
2,219,837	+		AO353_10145	0.42	+2.7
2,219,838	-		AO353_10145	0.42	-0.5
2,219,838	-		AO353_10145	0.42	-2.9
2,219,860	-		AO353_10145	0.46	+0.4
2,219,860	-		AO353_10145	0.46	-1.3
2,219,860	-		AO353_10145	0.46	-0.9
2,220,013	+		AO353_10145	0.73	-1.0
2,220,013	+		AO353_10145	0.73	+1.6
2,220,013	+		AO353_10145	0.73	-1.0
2,220,013	+		AO353_10145	0.73	+2.7
2,220,013	+		AO353_10145	0.73	+0.7
2,220,013	+		AO353_10145	0.73	-0.5
2,220,013	+		AO353_10145	0.73	+0.7
2,220,013	+		AO353_10145	0.73	+1.3
2,220,013	+		AO353_10145	0.73	+1.3
2,220,013	+		AO353_10145	0.73	+2.7
2,220,014	-		AO353_10145	0.73	-0.5
2,220,014	-		AO353_10145	0.73	+3.0
2,220,014	-		AO353_10145	0.73	-0.4
2,220,111	+				-2.3
2,220,136	+				+0.7
2,220,137	-				+1.4
2,220,137	-				-0.3
2,220,387	+		AO353_10150	0.17	-0.9
2,220,387	+		AO353_10150	0.17	-1.5
2,220,387	+		AO353_10150	0.17	+1.3
2,220,387	+		AO353_10150	0.17	+0.4
2,220,387	+		AO353_10150	0.17	-1.4
2,220,387	+		AO353_10150	0.17	-0.5
2,220,387	+		AO353_10150	0.17	+1.5
2,220,387	+		AO353_10150	0.17	-0.0
2,220,387	+		AO353_10150	0.17	+1.9
2,220,387	+		AO353_10150	0.17	-0.7
2,220,388	-		AO353_10150	0.17	+1.1
2,220,388	-		AO353_10150	0.17	-1.3
2,220,388	-		AO353_10150	0.17	-0.9
2,220,388	-		AO353_10150	0.17	-0.0
2,220,388	-		AO353_10150	0.17	+1.7
2,220,388	-		AO353_10150	0.17	-0.8
2,220,388	-		AO353_10150	0.17	-1.9
2,220,388	-		AO353_10150	0.17	-0.0
2,220,388	-		AO353_10150	0.17	+1.3
2,220,388	-		AO353_10150	0.17	-2.1
2,220,390	-		AO353_10150	0.17	-1.3
2,220,419	+		AO353_10150	0.19	+2.3
2,220,420	-		AO353_10150	0.19	-1.8
2,220,522	+		AO353_10150	0.27	+1.0
2,220,522	+		AO353_10150	0.27	-0.9
2,220,522	+		AO353_10150	0.27	-0.3
2,220,522	+		AO353_10150	0.27	-1.6
2,220,523	-		AO353_10150	0.27	+1.4
2,220,523	-		AO353_10150	0.27	-0.7
2,220,685	+		AO353_10150	0.39	+0.1
2,220,686	-		AO353_10150	0.39	-1.4
2,220,993	-		AO353_10150	0.62	+2.2
2,221,046	-		AO353_10150	0.66	+1.0
2,221,046	-		AO353_10150	0.66	+2.4
2,221,046	-		AO353_10150	0.66	-1.5
2,221,159	+		AO353_10150	0.74	+3.0
2,221,159	+		AO353_10150	0.74	+0.3
2,221,159	+		AO353_10150	0.74	-0.3
2,221,159	+		AO353_10150	0.74	+1.1
2,221,159	+		AO353_10150	0.74	-0.9
2,221,160	-		AO353_10150	0.74	+1.1