Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10010

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,189,287	+		AO353_10000	0.70	+1.4
2,189,288	-		AO353_10000	0.71	+2.3
2,189,288	-		AO353_10000	0.71	-0.0
2,189,417	-				-0.9
2,189,417	-				-0.5
2,189,417	-				-2.5
2,189,417	-				-2.9
2,189,417	-				-1.8
2,189,595	+		AO353_10005	0.24	-1.7
2,189,595	+		AO353_10005	0.24	-1.8
2,189,595	+		AO353_10005	0.24	+0.5
2,189,596	-		AO353_10005	0.24	-2.4
2,189,596	-		AO353_10005	0.24	-2.7
2,189,596	-		AO353_10005	0.24	-1.6
2,189,596	-		AO353_10005	0.24	-0.7
2,189,596	-		AO353_10005	0.24	-0.7
2,189,596	-		AO353_10005	0.24	-0.7
2,189,673	+		AO353_10005	0.35	-0.7
2,189,674	-		AO353_10005	0.35	+2.0
2,189,810	+		AO353_10005	0.56	+1.1
2,189,810	+		AO353_10005	0.56	+0.7
2,189,823	+		AO353_10005	0.58	+1.6
2,189,823	+		AO353_10005	0.58	-0.5
2,189,823	+		AO353_10005	0.58	+2.1
2,189,824	-		AO353_10005	0.58	-3.0
2,189,824	-		AO353_10005	0.58	-1.0
2,189,824	-		AO353_10005	0.58	+2.3
2,189,904	+		AO353_10005	0.70	+1.4
2,189,904	+		AO353_10005	0.70	-0.2
2,189,904	+		AO353_10005	0.70	+0.8
2,189,905	-		AO353_10005	0.70	+1.1
2,189,992	-		AO353_10005	0.83	-1.7
2,189,992	-		AO353_10005	0.83	-0.7
2,190,168	+				-0.5
2,190,168	+				-0.0
2,190,169	-				-1.7
2,190,169	-				+2.4
2,190,169	-				-2.0
2,190,169	-				-1.3
2,190,169	-				-1.6
2,190,237	+				-0.0
2,190,237	+				+2.3
2,190,238	-				+0.6
2,190,263	+				+1.4
2,190,263	+				-0.2
2,190,263	+				+0.7
2,190,263	+				-1.3
2,190,264	-				-0.0
2,190,264	-				+0.5
2,190,264	-				-1.5
2,190,264	-				-2.2
2,190,264	-				-1.2
2,190,265	+				-1.2
2,190,265	+				-1.0
2,190,265	+				-1.2
2,190,265	+				-2.4
2,190,265	+				-1.0
2,190,265	+				-0.5
2,190,265	+				+1.4
2,190,265	+				-1.3
2,190,265	+				-1.0
2,190,265	+				-1.6
2,190,265	+				+1.0
2,190,265	+				-1.0
2,190,265	+				+1.1
2,190,265	+				+1.0
2,190,265	+				+0.8
2,190,266	-				-1.8
2,190,266	-				-2.0
2,190,266	-				+0.7
2,190,266	-				-0.5
2,190,266	-				+0.3
2,190,266	-				-0.0
2,190,429	+		AO353_10010	0.21	+1.7
2,190,500	+		AO353_10010	0.29	-1.5
2,190,500	+		AO353_10010	0.29	-1.7
2,190,500	+		AO353_10010	0.29	+2.2
2,190,500	+		AO353_10010	0.29	+0.6
2,190,500	+		AO353_10010	0.29	+1.5
2,190,501	-		AO353_10010	0.29	+0.0
2,190,501	-		AO353_10010	0.29	+1.3
2,190,501	-		AO353_10010	0.29	-1.0
2,190,501	-		AO353_10010	0.29	+0.7
2,190,501	-		AO353_10010	0.29	+0.8
2,190,501	-		AO353_10010	0.29	+0.3
2,190,501	-		AO353_10010	0.29	+1.5
2,190,501	-		AO353_10010	0.29	-1.0
2,190,628	+		AO353_10010	0.44	+0.3
2,190,629	-		AO353_10010	0.44	+1.3
2,190,676	+		AO353_10010	0.49	-0.5
2,190,801	+		AO353_10010	0.63	+1.6
2,190,850	+		AO353_10010	0.68	-1.6
2,190,934	+		AO353_10010	0.78	-2.7
2,190,954	+		AO353_10010	0.80	+0.3
2,190,955	-		AO353_10010	0.80	+1.1
2,190,955	-		AO353_10010	0.80	+1.5
2,190,955	-		AO353_10010	0.80	+2.5
2,190,955	-		AO353_10010	0.80	-0.0
2,190,991	+		AO353_10010	0.84	-0.0
2,190,992	-		AO353_10010	0.84	-0.0
2,190,992	-		AO353_10010	0.84	-2.6
2,190,992	-		AO353_10010	0.84	-0.0
2,190,992	-		AO353_10010	0.84	+1.2
2,190,993	+		AO353_10010	0.84	+1.3
2,190,993	+		AO353_10010	0.84	+0.7
2,190,994	-		AO353_10010	0.84	-0.0
2,190,994	-		AO353_10010	0.84	-1.2
2,190,994	-		AO353_10010	0.84	+1.3
2,190,994	-		AO353_10010	0.84	+2.5
2,190,994	-		AO353_10010	0.84	+1.3
2,190,994	-		AO353_10010	0.84	-0.9
2,190,994	-		AO353_10010	0.84	+2.0
2,190,994	-		AO353_10010	0.84	+2.6
2,190,994	-		AO353_10010	0.84	+1.9
2,190,994	-		AO353_10010	0.84	-1.4
2,191,000	+		AO353_10010	0.85	-3.2
2,191,116	-				-2.7
2,191,135	+				-0.0
2,191,136	-				-1.6
2,191,136	-				+1.3
2,191,136	-				-1.0
2,191,136	-				-0.0
2,191,136	-				+1.3
2,191,144	+				-0.5
2,191,144	+				+0.7
2,191,145	-				-0.6
2,191,187	+				+2.0
2,191,188	-				-1.6
2,191,189	+				+1.7
2,191,189	+				-1.6
2,191,189	+				-1.0
2,191,189	+				-1.4
2,191,190	-				+1.4
2,191,196	+				-2.0
2,191,196	+				+1.3
2,191,197	-				-1.2
2,191,197	-				+1.9
2,191,215	+				-0.7
2,191,215	+				-2.6
2,191,216	-				-0.5
2,191,218	+				+0.6
2,191,219	-				+2.3
2,191,375	+		AO353_10015	0.15	+0.7
2,191,375	+		AO353_10015	0.15	-1.4
2,191,375	+		AO353_10015	0.15	+5.3
2,191,594	+		AO353_10015	0.42	-1.9
2,191,594	+		AO353_10015	0.42	-0.7
2,191,594	+		AO353_10015	0.42	+1.3
2,191,594	+		AO353_10015	0.42	-1.4
2,191,595	-		AO353_10015	0.42	-1.0
2,191,597	+		AO353_10015	0.42	+3.1
2,191,597	+		AO353_10015	0.42	-0.3
2,191,597	+		AO353_10015	0.42	+1.5
2,191,597	+		AO353_10015	0.42	+0.3
2,191,597	+		AO353_10015	0.42	+1.5
2,191,597	+		AO353_10015	0.42	+2.3
2,191,597	+		AO353_10015	0.42	-1.3
2,191,597	+		AO353_10015	0.42	-1.0
2,191,597	+		AO353_10015	0.42	-0.5
2,191,597	+		AO353_10015	0.42	+0.6
2,191,598	-		AO353_10015	0.42	-2.1
2,191,598	-		AO353_10015	0.42	-1.6
2,191,598	-		AO353_10015	0.42	+2.3
2,191,598	-		AO353_10015	0.42	-0.0
2,191,598	-		AO353_10015	0.42	-0.3
2,191,598	-		AO353_10015	0.42	+0.9
2,191,598	-		AO353_10015	0.42	-0.3
2,191,598	-		AO353_10015	0.42	+1.1
2,191,598	-		AO353_10015	0.42	+1.3
2,191,598	-		AO353_10015	0.42	-2.2
2,191,598	-		AO353_10015	0.42	+1.1
2,191,699	+		AO353_10015	0.55	+2.6
2,191,699	+		AO353_10015	0.55	-1.0
2,191,700	-		AO353_10015	0.55	-1.3
2,191,700	-		AO353_10015	0.55	+0.7
2,191,700	-		AO353_10015	0.55	-0.3
2,191,708	+		AO353_10015	0.56	-2.0
2,191,709	-		AO353_10015	0.56	-1.9
2,191,709	-		AO353_10015	0.56	-0.0
2,191,775	+		AO353_10015	0.64	-2.0
2,191,775	+		AO353_10015	0.64	-0.2
2,191,775	+		AO353_10015	0.64	-1.9
2,191,775	+		AO353_10015	0.64	-1.5
2,191,775	+		AO353_10015	0.64	-2.2
2,191,775	+		AO353_10015	0.64	+0.7
2,191,775	+		AO353_10015	0.64	+1.9
2,191,775	+		AO353_10015	0.64	-0.5
2,191,775	+		AO353_10015	0.64	-0.0
2,191,775	+		AO353_10015	0.64	+3.0
2,191,776	-		AO353_10015	0.64	-0.9
2,191,776	-		AO353_10015	0.64	+1.0
2,191,776	-		AO353_10015	0.64	-1.4
2,191,776	-		AO353_10015	0.64	+0.4
2,191,776	-		AO353_10015	0.64	+1.6
2,191,776	-		AO353_10015	0.64	+1.2
2,191,789	+		AO353_10015	0.66	+2.9
2,191,927	+		AO353_10015	0.82	-0.3
2,191,927	+		AO353_10015	0.82	-1.3
2,191,928	-		AO353_10015	0.83	-1.0