Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09810

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,144,350	+				+3.3
2,144,350	+				-2.0
2,144,350	+				-1.6
2,144,350	+				+0.1
2,144,351	-				-2.2
2,144,351	-				+1.6
2,144,427	+				-0.3
2,144,427	+				+1.8
2,144,428	-				+1.0
2,144,428	-				-1.6
2,144,428	-				-1.2
2,144,428	-				+1.3
2,144,482	+		AO353_09795	0.30	+3.0
2,144,486	+		AO353_09795	0.32	+0.9
2,144,550	-		AO353_09795	0.61	-0.0
2,144,553	+		AO353_09795	0.62	+1.9
2,144,553	+		AO353_09795	0.62	+3.8
2,144,553	+		AO353_09795	0.62	+0.5
2,144,553	+		AO353_09795	0.62	-1.5
2,144,553	+		AO353_09795	0.62	+2.2
2,144,554	-		AO353_09795	0.63	+0.3
2,144,554	-		AO353_09795	0.63	-0.9
2,144,554	-		AO353_09795	0.63	-0.0
2,144,554	-		AO353_09795	0.63	-2.2
2,144,559	+		AO353_09795	0.65	-1.9
2,144,576	+		AO353_09795	0.73	+0.7
2,144,576	+		AO353_09795	0.73	+1.3
2,144,577	-		AO353_09795	0.73	-0.2
2,144,577	-		AO353_09795	0.73	-1.2
2,144,690	+				-0.5
2,144,833	-		AO353_09800	0.46	-0.5
2,144,892	-		AO353_09800	0.73	-1.0
2,145,241	+				+3.1
2,145,279	-				-0.9
2,145,469	+		AO353_09810	0.27	-0.0
2,145,584	-		AO353_09810	0.53	+0.3
2,145,612	-		AO353_09810	0.59	+0.7
2,145,612	-		AO353_09810	0.59	-0.3
2,145,612	-		AO353_09810	0.59	-0.3
2,145,612	-		AO353_09810	0.59	+0.3
2,145,646	-		AO353_09810	0.66	-1.8
2,145,648	-		AO353_09810	0.67	+1.8
2,145,678	-		AO353_09810	0.74	+2.4
2,145,678	-		AO353_09810	0.74	+1.2
2,145,679	+		AO353_09810	0.74	+0.7
2,145,679	+		AO353_09810	0.74	-3.0
2,145,680	-		AO353_09810	0.74	-0.6
2,145,699	+		AO353_09810	0.78	+0.3
2,145,700	-		AO353_09810	0.79	+3.0
2,145,803	+				-1.9
2,145,819	+				+0.7
2,145,848	+				+2.2
2,145,853	+				+0.4
2,145,853	+				+2.6
2,145,853	+				+1.3
2,145,897	+				+2.1
2,145,915	-		AO353_09815	0.10	+1.1
2,145,915	-		AO353_09815	0.10	+1.6
2,146,196	-		AO353_09815	0.75	-1.0
2,146,207	+		AO353_09815	0.77	+2.2
2,146,210	-		AO353_09815	0.78	-2.5
2,146,228	+		AO353_09815	0.82	-0.1
2,146,228	+		AO353_09815	0.82	-0.5
2,146,229	-		AO353_09815	0.82	+0.8
2,146,229	-		AO353_09815	0.82	+0.1
2,146,231	-		AO353_09815	0.83	+0.1
2,146,231	-		AO353_09815	0.83	+0.6
2,146,231	-		AO353_09815	0.83	-1.2
2,146,273	+				+1.6
2,146,286	-				-2.3
2,146,286	-				-0.0
2,146,350	-				-1.4
2,146,368	+				+2.5
2,146,382	-				-2.6
2,146,382	-				+1.1
2,146,382	-				-0.0
2,146,382	-				-0.9
2,146,401	+				-0.3
2,146,401	+				-1.4
2,146,401	+				-0.0
2,146,401	+				+0.3
2,146,401	+				-0.9
2,146,401	+				-1.0
2,146,401	+				-2.4
2,146,402	-				+0.3
2,146,402	-				+3.9
2,146,402	-				-0.3
2,146,402	-				-0.7
2,146,402	-				+1.3
2,146,402	-				+1.3
2,146,404	+				+0.7
2,146,404	+				-1.0
2,146,405	-				-1.8
2,146,405	-				+0.9
2,146,475	-		AO353_09820	0.21	+0.9
2,146,497	+		AO353_09820	0.26	-1.6
2,146,497	+		AO353_09820	0.26	-0.3
2,146,497	+		AO353_09820	0.26	+1.4
2,146,497	+		AO353_09820	0.26	+2.5
2,146,497	+		AO353_09820	0.26	-0.7
2,146,497	+		AO353_09820	0.26	+0.2
2,146,497	+		AO353_09820	0.26	-0.3
2,146,498	-				+1.3
2,146,498	-		AO353_09820	0.26	-0.7
2,146,498	-		AO353_09820	0.26	-1.3
2,146,498	-		AO353_09820	0.26	+2.2
2,146,498	-		AO353_09820	0.26	-0.5
2,146,498	-		AO353_09820	0.26	+0.3
2,146,498	-		AO353_09820	0.26	+1.1
2,146,498	-		AO353_09820	0.26	-1.7
2,146,508	+		AO353_09820	0.28	+0.7
2,146,508	+		AO353_09820	0.28	-0.7
2,146,508	+		AO353_09820	0.28	+1.1
2,146,508	+		AO353_09820	0.28	-2.4
2,146,508	+		AO353_09820	0.28	+0.3
2,146,508	+		AO353_09820	0.28	-1.6
2,146,509	-		AO353_09820	0.28	+0.7
2,146,509	-		AO353_09820	0.28	+1.0
2,146,509	-		AO353_09820	0.28	+0.3
2,146,509	-		AO353_09820	0.28	-0.7
2,146,509	-		AO353_09820	0.28	-1.7
2,146,509	-		AO353_09820	0.28	-1.4
2,146,509	-		AO353_09820	0.28	+3.3
2,146,689	+		AO353_09820	0.66	-2.0
2,146,689	+		AO353_09820	0.66	-1.6
2,146,690	-		AO353_09820	0.66	+1.3
2,146,690	-		AO353_09820	0.66	+0.3
2,146,694	-		AO353_09820	0.67	+2.9
2,146,694	-		AO353_09820	0.67	-1.5
2,146,703	+		AO353_09820	0.69	-1.0
2,146,704	-		AO353_09820	0.69	-0.0
2,146,704	-		AO353_09820	0.69	-1.0
2,146,704	-		AO353_09820	0.69	-0.7
2,146,704	-		AO353_09820	0.69	-0.0
2,146,745	+		AO353_09820	0.78	-0.0
2,146,746	-		AO353_09820	0.78	+0.5
2,146,771	+		AO353_09820	0.83	-1.2
2,146,771	+		AO353_09820	0.83	-1.8
2,146,771	+		AO353_09820	0.83	+1.7
2,146,772	-		AO353_09820	0.83	-0.0
2,146,772	-		AO353_09820	0.83	-0.2
2,146,790	+		AO353_09820	0.87	-1.7
2,146,790	+		AO353_09820	0.87	+0.7
2,146,791	-		AO353_09820	0.87	-1.4
2,146,791	-		AO353_09820	0.87	-2.0
2,146,791	-		AO353_09820	0.87	-1.2