Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09615

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,108,066	+		AO353_09610	0.60	-0.3
2,108,066	+		AO353_09610	0.60	-1.6
2,108,066	+		AO353_09610	0.60	-0.9
2,108,066	+		AO353_09610	0.60	+2.4
2,108,066	+		AO353_09610	0.60	-1.6
2,108,066	+		AO353_09610	0.60	-0.5
2,108,066	+		AO353_09610	0.60	-1.4
2,108,066	+		AO353_09610	0.60	-2.4
2,108,066	+		AO353_09610	0.60	-1.4
2,108,066	+		AO353_09610	0.60	-1.6
2,108,067	-		AO353_09610	0.60	-0.5
2,108,067	-		AO353_09610	0.60	+0.1
2,108,067	-		AO353_09610	0.60	+1.4
2,108,067	-		AO353_09610	0.60	-1.9
2,108,067	-		AO353_09610	0.60	-2.0
2,108,067	-		AO353_09610	0.60	+0.3
2,108,067	-		AO353_09610	0.60	+2.2
2,108,067	-		AO353_09610	0.60	+3.5
2,108,067	-		AO353_09610	0.60	+0.3
2,108,067	-		AO353_09610	0.60	-0.5
2,108,067	-		AO353_09610	0.60	-1.3
2,108,067	-		AO353_09610	0.60	+4.2
2,108,067	-		AO353_09610	0.60	+2.3
2,108,067	-		AO353_09610	0.60	+1.3
2,108,067	-		AO353_09610	0.60	-0.3
2,108,067	-		AO353_09610	0.60	-0.7
2,108,067	-		AO353_09610	0.60	-0.7
2,108,067	-		AO353_09610	0.60	+3.5
2,108,068	+		AO353_09610	0.60	-0.9
2,108,068	+		AO353_09610	0.60	-1.7
2,108,068	+		AO353_09610	0.60	+0.4
2,108,074	-		AO353_09610	0.60	-0.7
2,108,074	-		AO353_09610	0.60	-1.4
2,108,111	+		AO353_09610	0.62	+0.3
2,108,112	-		AO353_09610	0.62	+0.3
2,108,112	-		AO353_09610	0.62	-0.5
2,108,112	-		AO353_09610	0.62	-1.5
2,108,177	+		AO353_09610	0.66	+0.3
2,108,177	+		AO353_09610	0.66	-0.5
2,108,177	+		AO353_09610	0.66	+4.2
2,108,178	-		AO353_09610	0.66	-3.7
2,108,178	-		AO353_09610	0.66	-0.5
2,108,178	-		AO353_09610	0.66	+1.8
2,108,178	-		AO353_09610	0.66	-0.5
2,108,444	+		AO353_09610	0.80	+0.7
2,108,444	+		AO353_09610	0.80	+2.7
2,108,444	+		AO353_09610	0.80	-0.3
2,108,444	+		AO353_09610	0.80	-0.0
2,108,444	+		AO353_09610	0.80	+1.8
2,108,444	+		AO353_09610	0.80	-1.0
2,108,444	+		AO353_09610	0.80	-1.4
2,108,444	+		AO353_09610	0.80	-0.9
2,108,444	+		AO353_09610	0.80	+0.7
2,108,444	+		AO353_09610	0.80	-1.9
2,108,444	+		AO353_09610	0.80	+1.7
2,108,445	-		AO353_09610	0.80	-2.5
2,108,445	-		AO353_09610	0.80	+0.3
2,108,445	-		AO353_09610	0.80	+0.7
2,108,445	-		AO353_09610	0.80	-1.1
2,108,445	-		AO353_09610	0.80	+1.3
2,108,445	-		AO353_09610	0.80	+2.3
2,108,445	-		AO353_09610	0.80	+0.3
2,108,445	-		AO353_09610	0.80	-1.8
2,108,445	-		AO353_09610	0.80	-0.9
2,108,445	-		AO353_09610	0.80	-0.7
2,108,445	-		AO353_09610	0.80	-0.9
2,108,445	-		AO353_09610	0.80	+1.6
2,108,504	+		AO353_09610	0.83	-1.3
2,108,521	+		AO353_09610	0.84	-0.0
2,108,712	-				+2.0
2,108,712	-				+1.8
2,108,712	-				-1.3
2,108,712	-				-2.0
2,108,712	-				-1.3
2,108,732	-				+2.1
2,108,814	+				-0.2
2,108,848	+				+0.0
2,108,848	+				-0.7
2,108,848	+				-0.7
2,108,848	+				+3.3
2,108,849	-				-1.3
2,108,849	-				-0.3
2,108,849	-				+1.6
2,108,994	-		AO353_09615	0.21	+2.4
2,109,088	+		AO353_09615	0.30	-1.5
2,109,088	+		AO353_09615	0.30	-0.3
2,109,088	+		AO353_09615	0.30	-2.0
2,109,088	+		AO353_09615	0.30	+2.3
2,109,088	+		AO353_09615	0.30	-1.0
2,109,088	+		AO353_09615	0.30	+0.7
2,109,088	+		AO353_09615	0.30	+0.7
2,109,088	+		AO353_09615	0.30	-1.8
2,109,088	+		AO353_09615	0.30	-0.5
2,109,088	+		AO353_09615	0.30	-1.3
2,109,088	+		AO353_09615	0.30	+1.7
2,109,089	-		AO353_09615	0.30	-1.5
2,109,089	-		AO353_09615	0.30	-0.7
2,109,089	-		AO353_09615	0.30	-0.0
2,109,089	-		AO353_09615	0.30	-0.3
2,109,089	-		AO353_09615	0.30	+0.3
2,109,089	-		AO353_09615	0.30	+1.0
2,109,089	-		AO353_09615	0.30	-0.5
2,109,089	-		AO353_09615	0.30	-1.5
2,109,175	+		AO353_09615	0.38	+1.5
2,109,175	+		AO353_09615	0.38	+0.9
2,109,232	+		AO353_09615	0.43	+0.2
2,109,323	-		AO353_09615	0.52	+1.9
2,109,353	-		AO353_09615	0.55	-0.7
2,109,376	-		AO353_09615	0.57	-1.0
2,109,376	-		AO353_09615	0.57	+0.7
2,109,385	+		AO353_09615	0.58	+0.7
2,109,385	+		AO353_09615	0.58	-0.5
2,109,386	-		AO353_09615	0.58	-1.0
2,109,386	-		AO353_09615	0.58	-2.0
2,109,415	+		AO353_09615	0.61	+1.7
2,109,415	+		AO353_09615	0.61	+0.7
2,109,415	+		AO353_09615	0.61	+1.3
2,109,415	+		AO353_09615	0.61	+0.3
2,109,415	+		AO353_09615	0.61	-1.4
2,109,415	+		AO353_09615	0.61	-0.4
2,109,416	-		AO353_09615	0.61	-0.0
2,109,416	-		AO353_09615	0.61	-0.3
2,109,503	-		AO353_09615	0.69	+0.4
2,109,503	-		AO353_09615	0.69	-1.0
2,109,503	-		AO353_09615	0.69	-1.2
2,109,562	+		AO353_09615	0.75	-0.9
2,109,562	+		AO353_09615	0.75	-1.4
2,109,562	+		AO353_09615	0.75	-0.7
2,109,562	+		AO353_09615	0.75	-0.5
2,109,562	+		AO353_09615	0.75	+1.6
2,109,562	+		AO353_09615	0.75	-0.7
2,109,562	+		AO353_09615	0.75	+1.3
2,109,562	+		AO353_09615	0.75	-0.9
2,109,563	-		AO353_09615	0.75	-1.9
2,109,563	-		AO353_09615	0.75	+0.9
2,109,563	-		AO353_09615	0.75	+1.6
2,109,563	-		AO353_09615	0.75	+1.4
2,109,563	-		AO353_09615	0.75	-0.7
2,109,563	-		AO353_09615	0.75	-1.9
2,109,563	-		AO353_09615	0.75	+2.2
2,109,563	-		AO353_09615	0.75	+0.3
2,109,563	-		AO353_09615	0.75	+0.8
2,109,563	-		AO353_09615	0.75	-1.3
2,109,563	-		AO353_09615	0.75	+2.7
2,109,563	-		AO353_09615	0.75	-0.3
2,109,563	-		AO353_09615	0.75	+0.9
2,109,623	-		AO353_09615	0.80	+1.7
2,109,623	-		AO353_09615	0.80	+0.3
2,109,677	+		AO353_09615	0.86	-2.0
2,109,720	+		AO353_09615	0.90	-0.5
2,109,720	+		AO353_09615	0.90	+0.3
2,109,720	+		AO353_09615	0.90	-0.7
2,109,720	+		AO353_09615	0.90	+2.5
2,109,721	-		AO353_09615	0.90	-1.7
2,109,758	+				+1.3
2,109,758	+				-0.7
2,109,758	+				-0.0
2,109,758	+				-0.7
2,109,759	-				-0.5
2,109,759	-				-0.2
2,109,759	-				+2.4
2,109,759	-				+0.7
2,109,761	+				-0.5
2,109,762	-				+1.3
2,109,775	+				-1.0
2,109,776	-				-1.4
2,109,858	+				+1.1
2,109,859	-				+2.5
2,109,859	-				+2.8
2,109,872	+				+1.3
2,109,923	+				-0.9
2,109,923	+				-1.7
2,109,923	+				-2.4
2,109,923	+				+1.3
2,109,923	+				-0.7
2,109,923	+				+0.7
2,109,923	+				-1.3
2,109,923	+				-0.7
2,109,923	+				+1.1
2,109,923	+				+1.3
2,109,923	+				+2.0
2,109,924	-				-0.9
2,109,924	-				+3.3
2,109,924	-				-1.5
2,109,924	-				-2.6
2,109,924	-				-0.0
2,109,924	-				-0.5
2,110,125	-		AO353_09620	0.11	-0.5
2,110,125	-		AO353_09620	0.11	-1.6
2,110,277	+		AO353_09620	0.17	+1.6
2,110,277	+		AO353_09620	0.17	-0.0
2,110,277	+		AO353_09620	0.17	-0.7
2,110,277	+		AO353_09620	0.17	+0.5
2,110,277	+		AO353_09620	0.17	+0.6
2,110,277	+		AO353_09620	0.17	+0.2
2,110,277	+		AO353_09620	0.17	+2.9
2,110,278	-		AO353_09620	0.17	-1.8
2,110,278	-		AO353_09620	0.17	+2.3
2,110,278	-		AO353_09620	0.17	-0.3
2,110,278	-		AO353_09620	0.17	+0.8
2,110,278	-		AO353_09620	0.17	-0.1
2,110,278	-		AO353_09620	0.17	-0.7
2,110,278	-		AO353_09620	0.17	-0.4
2,110,278	-		AO353_09620	0.17	+1.8
2,110,406	-		AO353_09620	0.22	-0.1
2,110,547	-		AO353_09620	0.27	+3.6
2,110,742	-		AO353_09620	0.34	-0.3
2,110,764	+		AO353_09620	0.35	-0.8
2,110,765	-		AO353_09620	0.35	+1.1
2,110,765	-		AO353_09620	0.35	-1.8
2,110,765	-		AO353_09620	0.35	+3.0
2,110,765	-		AO353_09620	0.35	-1.2