Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09425

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,070,360	+				+2.2
2,070,360	+				-0.7
2,070,360	+				-1.5
2,070,360	+				-0.6
2,070,360	+				+0.2
2,070,360	+				+2.6
2,070,361	-				+2.6
2,070,361	-				+0.7
2,070,361	-				+0.9
2,070,361	-				-0.7
2,070,386	+				+2.7
2,070,528	-		AO353_09420	0.14	+1.5
2,070,528	-		AO353_09420	0.14	-0.7
2,070,723	+		AO353_09420	0.34	-0.1
2,070,723	+		AO353_09420	0.34	-1.3
2,070,723	+		AO353_09420	0.34	-3.0
2,070,723	+		AO353_09420	0.34	+1.1
2,070,723	+		AO353_09420	0.34	-0.0
2,070,724	-		AO353_09420	0.34	+6.7
2,070,724	-		AO353_09420	0.34	-1.4
2,070,724	-		AO353_09420	0.34	-1.0
2,070,724	-		AO353_09420	0.34	+2.1
2,070,794	+		AO353_09420	0.41	-0.5
2,070,794	+		AO353_09420	0.41	-0.5
2,070,794	+		AO353_09420	0.41	-1.5
2,070,795	-		AO353_09420	0.41	-0.8
2,070,795	-		AO353_09420	0.41	+0.8
2,070,795	-		AO353_09420	0.41	-0.0
2,070,795	-		AO353_09420	0.41	-0.3
2,070,797	+		AO353_09420	0.41	-1.2
2,070,797	+		AO353_09420	0.41	-0.5
2,070,798	-		AO353_09420	0.41	-0.7
2,070,798	-		AO353_09420	0.41	+0.3
2,070,857	+		AO353_09420	0.47	+3.3
2,070,857	+		AO353_09420	0.47	-1.2
2,070,857	+		AO353_09420	0.47	-1.9
2,070,857	+		AO353_09420	0.47	-1.7
2,070,858	-		AO353_09420	0.47	-0.9
2,070,858	-		AO353_09420	0.47	-0.9
2,070,986	+		AO353_09420	0.60	-0.8
2,070,986	+		AO353_09420	0.60	-0.3
2,070,986	+		AO353_09420	0.60	-1.0
2,070,986	+		AO353_09420	0.60	-1.2
2,070,986	+		AO353_09420	0.60	-0.3
2,070,986	+		AO353_09420	0.60	-0.7
2,070,987	-		AO353_09420	0.60	-0.9
2,070,987	-		AO353_09420	0.60	-0.8
2,070,987	-		AO353_09420	0.60	-1.7
2,071,094	+		AO353_09420	0.70	-2.8
2,071,094	+		AO353_09420	0.70	-2.1
2,071,094	+		AO353_09420	0.70	-0.3
2,071,094	+		AO353_09420	0.70	+0.5
2,071,094	+		AO353_09420	0.70	+0.3
2,071,094	+		AO353_09420	0.70	-1.4
2,071,095	-		AO353_09420	0.70	-0.5
2,071,250	+		AO353_09420	0.86	+3.1
2,071,251	-		AO353_09420	0.86	-2.0
2,071,251	-		AO353_09420	0.86	+0.7
2,071,328	+				+2.0
2,071,329	-				+0.7
2,071,329	-				-2.0
2,071,329	-				-0.5
2,071,336	+				-1.5
2,071,358	-				+1.3
2,071,358	-				-1.6
2,071,358	-				-1.3
2,071,379	+				+2.1
2,071,379	+				+0.3
2,071,379	+				-0.8
2,071,379	+				-0.3
2,071,379	+				+3.6
2,071,379	+				-1.0
2,071,379	+				-0.3
2,071,380	-				-1.9
2,071,380	-				-0.3
2,071,380	-				+0.3
2,071,380	-				-0.5
2,071,380	-				-0.0
2,071,380	-				+2.2
2,071,396	+				-0.0
2,071,396	+				+1.8
2,071,396	+				+1.1
2,071,396	+				+0.1
2,071,396	+				-0.9
2,071,396	+				-0.9
2,071,396	+				-0.5
2,071,397	-				-1.4
2,071,397	-				-0.3
2,071,397	-				-1.5
2,071,436	-				+0.7
2,071,436	-				+2.3
2,071,513	+				-1.4
2,071,513	+				+0.3
2,071,513	+				+0.9
2,071,513	+				-1.6
2,071,513	+				-0.5
2,071,513	+				-1.0
2,071,513	+				-1.3
2,071,513	+				-0.5
2,071,513	+				+2.7
2,071,513	+				+0.0
2,071,513	+				+3.0
2,071,513	+				+0.7
2,071,513	+				+2.7
2,071,513	+				-1.8
2,071,514	-				-0.5
2,071,514	-				+2.9
2,071,514	-				+0.3
2,071,514	-				-2.0
2,071,651	+		AO353_09425	0.16	+1.2
2,071,651	+		AO353_09425	0.16	+2.9
2,071,652	-		AO353_09425	0.17	-0.0
2,071,655	-		AO353_09425	0.17	-1.3
2,071,655	-		AO353_09425	0.17	-0.3
2,071,669	+		AO353_09425	0.18	+1.2
2,071,669	+		AO353_09425	0.18	+2.5
2,071,669	+		AO353_09425	0.18	+1.4
2,071,670	-				+1.3
2,071,670	-		AO353_09425	0.18	-0.9
2,071,670	-		AO353_09425	0.18	+2.7
2,071,717	+		AO353_09425	0.20	+2.5
2,071,717	+		AO353_09425	0.20	-1.0
2,071,717	+		AO353_09425	0.20	+1.7
2,071,717	+		AO353_09425	0.20	-0.8
2,071,717	+		AO353_09425	0.20	-0.7
2,071,717	+		AO353_09425	0.20	+3.6
2,071,717	+		AO353_09425	0.20	+0.9
2,071,718	-		AO353_09425	0.20	+0.7
2,071,718	-		AO353_09425	0.20	-1.2
2,071,718	-		AO353_09425	0.20	-0.0
2,071,948	+		AO353_09425	0.33	+0.7
2,071,948	+		AO353_09425	0.33	+1.3
2,071,948	+		AO353_09425	0.33	+2.0
2,071,948	+		AO353_09425	0.33	-0.7
2,071,948	+		AO353_09425	0.33	+2.3
2,071,948	+		AO353_09425	0.33	+0.8
2,071,949	-		AO353_09425	0.33	-0.7
2,071,949	-		AO353_09425	0.33	-0.9
2,071,949	-		AO353_09425	0.33	+1.3
2,071,996	+		AO353_09425	0.36	+2.3
2,071,996	+		AO353_09425	0.36	-0.5
2,071,997	-		AO353_09425	0.36	-0.9
2,072,059	+		AO353_09425	0.39	+0.3
2,072,059	+		AO353_09425	0.39	-0.3
2,072,059	+		AO353_09425	0.39	-0.5
2,072,059	+		AO353_09425	0.39	-2.3
2,072,059	+		AO353_09425	0.39	-1.4
2,072,059	+		AO353_09425	0.39	-2.1
2,072,059	+		AO353_09425	0.39	-1.3
2,072,060	-		AO353_09425	0.39	+0.0
2,072,060	-		AO353_09425	0.39	+0.3
2,072,060	-		AO353_09425	0.39	+1.1
2,072,060	-		AO353_09425	0.39	-0.3
2,072,060	-		AO353_09425	0.39	+1.3
2,072,068	+		AO353_09425	0.40	-0.7
2,072,137	+		AO353_09425	0.44	-0.7
2,072,158	+		AO353_09425	0.45	+2.7
2,072,158	+		AO353_09425	0.45	-2.0
2,072,158	+		AO353_09425	0.45	-0.3
2,072,158	+		AO353_09425	0.45	+0.7
2,072,158	+		AO353_09425	0.45	-0.9
2,072,158	+		AO353_09425	0.45	-1.6
2,072,159	-		AO353_09425	0.45	-1.5
2,072,159	-		AO353_09425	0.45	+1.4
2,072,171	+		AO353_09425	0.46	+0.4
2,072,172	-		AO353_09425	0.46	+2.3
2,072,230	+		AO353_09425	0.49	+1.3
2,072,230	+		AO353_09425	0.49	+1.8
2,072,230	+		AO353_09425	0.49	-1.8
2,072,230	+		AO353_09425	0.49	-0.0
2,072,231	-		AO353_09425	0.49	+0.3
2,072,231	-		AO353_09425	0.49	-0.9
2,072,231	-		AO353_09425	0.49	-1.0
2,072,399	-		AO353_09425	0.58	+1.9
2,072,399	-		AO353_09425	0.58	-0.0
2,072,410	+		AO353_09425	0.59	-0.7
2,072,599	+		AO353_09425	0.70	-3.1
2,072,600	-		AO353_09425	0.70	-1.0
2,072,600	-		AO353_09425	0.70	-0.0
2,072,617	+		AO353_09425	0.71	-1.2
2,072,617	+		AO353_09425	0.71	+3.1
2,072,617	+		AO353_09425	0.71	-1.9
2,072,617	+		AO353_09425	0.71	+4.2
2,072,617	+		AO353_09425	0.71	-0.0
2,072,618	-		AO353_09425	0.71	+0.7
2,072,618	-		AO353_09425	0.71	+0.7
2,072,618	-		AO353_09425	0.71	+1.3
2,072,618	-		AO353_09425	0.71	-1.0
2,072,669	+		AO353_09425	0.73	-0.6
2,072,731	+		AO353_09425	0.77	+1.3
2,072,732	-		AO353_09425	0.77	-0.5
2,072,732	-		AO353_09425	0.77	+3.6
2,072,732	-		AO353_09425	0.77	+4.0
2,072,732	-		AO353_09425	0.77	-0.9
2,072,732	-		AO353_09425	0.77	-2.0
2,072,880	+		AO353_09425	0.85	-0.8
2,072,880	+		AO353_09425	0.85	-2.6
2,072,881	-		AO353_09425	0.85	-0.5
2,072,881	-		AO353_09425	0.85	+0.3
2,072,881	-		AO353_09425	0.85	-1.2
2,072,911	+		AO353_09425	0.87	+0.6
2,072,911	+		AO353_09425	0.87	+1.0
2,072,911	+		AO353_09425	0.87	-0.7
2,072,911	+		AO353_09425	0.87	+2.1
2,072,911	+		AO353_09425	0.87	+0.1
2,072,911	+		AO353_09425	0.87	+0.7
2,072,911	+		AO353_09425	0.87	-1.5
2,072,912	-		AO353_09425	0.87	+1.3
2,072,912	-		AO353_09425	0.87	+2.5
2,072,912	-		AO353_09425	0.87	-0.9
2,072,912	-		AO353_09425	0.87	-0.3
2,072,912	-		AO353_09425	0.87	-1.2
2,073,071	+				+2.3
2,073,125	-				+0.3
2,073,127	+				+0.1
2,073,127	+				-1.9
2,073,127	+				+0.7
2,073,127	+				+3.0
2,073,128	-				-2.0
2,073,128	-				-0.7
2,073,128	-				-1.5
2,073,128	-				-0.0
2,073,159	+				+1.7
2,073,163	-				-1.2
2,073,224	+				-1.5
2,073,264	+				-1.3
2,073,264	+				-0.6
2,073,265	-				+0.9
2,073,279	+				-0.7
2,073,284	-				+4.0
2,073,284	-				+0.9
2,073,284	-				+0.8
2,073,309	+				+1.2
2,073,455	-				+4.5
2,073,459	-				+0.7
2,073,520	-				+0.3
2,073,681	+				+1.3
2,073,681	+				+0.3
2,073,748	-				-2.2
2,073,748	-				+2.3
2,073,841	+		AO353_09430	0.19	+0.4
2,073,872	+		AO353_09430	0.23	-1.9
2,073,872	+		AO353_09430	0.23	+2.3
2,073,873	-		AO353_09430	0.23	+1.3
2,073,873	-		AO353_09430	0.23	-0.4
2,073,873	-		AO353_09430	0.23	-0.1
2,073,873	-		AO353_09430	0.23	+2.7
2,073,873	-		AO353_09430	0.23	+1.8
2,073,908	+		AO353_09430	0.26	+2.3
2,073,916	+		AO353_09430	0.27	+1.6
2,073,916	+		AO353_09430	0.27	+0.5
2,073,917	-		AO353_09430	0.27	+0.3
2,073,947	+		AO353_09430	0.30	+0.8
2,073,947	+		AO353_09430	0.30	-1.5
2,073,948	-		AO353_09430	0.30	+1.7
2,073,951	+		AO353_09430	0.31	-1.0
2,073,951	+		AO353_09430	0.31	+1.3
2,073,951	+		AO353_09430	0.31	+1.3
2,073,952	-		AO353_09430	0.31	+0.3
2,073,952	-		AO353_09430	0.31	-1.6
2,074,020	+		AO353_09430	0.38	+0.3
2,074,067	+		AO353_09430	0.43	-0.7
2,074,067	+		AO353_09430	0.43	+0.7
2,074,068	-		AO353_09430	0.43	+1.3
2,074,068	-		AO353_09430	0.43	-0.0
2,074,068	-		AO353_09430	0.43	-0.3
2,074,078	+		AO353_09430	0.44	-3.4
2,074,078	+		AO353_09430	0.44	-1.4
2,074,078	+		AO353_09430	0.44	-0.3
2,074,079	-		AO353_09430	0.44	+0.3
2,074,114	+		AO353_09430	0.48	-0.7