Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09145

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
2,008,109	+		AO353_09135	0.73	-0.4
2,008,109	+		AO353_09135	0.73	-0.5
2,008,110	-		AO353_09135	0.73	+0.7
2,008,110	-		AO353_09135	0.73	+1.3
2,008,226	+				-0.0
2,008,226	+				+1.0
2,008,226	+				+3.9
2,008,227	-				+0.3
2,008,227	-				-1.9
2,008,227	-				-2.2
2,008,227	-				-0.2
2,008,239	-				-1.0
2,008,239	-				+1.3
2,008,239	-				+1.4
2,008,239	-				-0.0
2,008,257	-				-1.5
2,008,296	+				-0.0
2,008,296	+				+1.9
2,008,297	-				-1.3
2,008,297	-				-1.3
2,008,297	-				-1.0
2,008,297	-				-0.6
2,008,297	-				-1.9
2,008,297	-				-1.7
2,008,298	+				+0.3
2,008,298	+				-0.3
2,008,298	+				-0.5
2,008,330	-				-1.4
2,008,343	+				+1.4
2,008,343	+				+2.0
2,008,346	+				+0.7
2,008,346	+				-0.6
2,008,346	+				-1.2
2,008,346	+				+1.3
2,008,346	+				-1.6
2,008,346	+				-0.4
2,008,346	+				-0.3
2,008,346	+				+3.3
2,008,347	-				-0.3
2,008,347	-				-0.7
2,008,347	-				+2.5
2,008,347	-				-1.8
2,008,347	-				-0.0
2,008,347	-				+0.7
2,008,347	-				+2.3
2,008,347	-				+2.2
2,008,361	+				+2.6
2,008,361	+				+0.7
2,008,362	-				+0.4
2,008,362	-				-1.5
2,008,362	-				-0.0
2,008,362	-				+3.5
2,008,362	-				-1.3
2,008,436	+				-0.0
2,008,436	+				-1.4
2,008,436	+				-0.0
2,008,494	+		AO353_09140	0.16	+0.7
2,008,494	+		AO353_09140	0.16	+1.6
2,008,495	-		AO353_09140	0.16	-0.9
2,008,495	-		AO353_09140	0.16	+0.7
2,008,495	-		AO353_09140	0.16	+1.0
2,008,497	+		AO353_09140	0.17	-1.4
2,008,497	+		AO353_09140	0.17	-1.5
2,008,497	+		AO353_09140	0.17	-1.9
2,008,497	+		AO353_09140	0.17	-1.2
2,008,497	+		AO353_09140	0.17	-0.5
2,008,497	+		AO353_09140	0.17	-0.0
2,008,497	+		AO353_09140	0.17	+3.3
2,008,497	+		AO353_09140	0.17	-0.0
2,008,498	-		AO353_09140	0.17	-0.5
2,008,498	-		AO353_09140	0.17	+2.3
2,008,498	-		AO353_09140	0.17	-0.7
2,008,498	-		AO353_09140	0.17	-1.3
2,008,498	-		AO353_09140	0.17	-0.5
2,008,498	-		AO353_09140	0.17	+1.3
2,008,498	-		AO353_09140	0.17	+0.6
2,008,498	-		AO353_09140	0.17	+2.3
2,008,498	-		AO353_09140	0.17	-0.9
2,008,626	+		AO353_09140	0.40	-0.7
2,008,626	+		AO353_09140	0.40	+2.2
2,008,627	-		AO353_09140	0.40	+1.1
2,008,627	-		AO353_09140	0.40	+3.7
2,008,627	-		AO353_09140	0.40	+1.4
2,008,648	+		AO353_09140	0.44	-1.2
2,008,728	+		AO353_09140	0.59	+1.6
2,008,728	+		AO353_09140	0.59	+0.9
2,008,728	+		AO353_09140	0.59	-1.8
2,008,728	+		AO353_09140	0.59	-0.5
2,008,728	+		AO353_09140	0.59	-0.8
2,008,729	-		AO353_09140	0.59	+1.1
2,008,729	-		AO353_09140	0.59	+1.8
2,008,805	+		AO353_09140	0.73	+0.7
2,008,805	+		AO353_09140	0.73	-1.0
2,008,805	+		AO353_09140	0.73	-0.6
2,008,805	+		AO353_09140	0.73	-0.5
2,008,805	+		AO353_09140	0.73	-0.5
2,008,805	+		AO353_09140	0.73	+1.5
2,008,805	+		AO353_09140	0.73	+0.7
2,008,805	+		AO353_09140	0.73	+0.7
2,008,805	+		AO353_09140	0.73	-2.4
2,008,805	+		AO353_09140	0.73	-1.0
2,008,805	+		AO353_09140	0.73	+0.7
2,008,806	-		AO353_09140	0.73	+1.8
2,008,806	-		AO353_09140	0.73	-0.0
2,008,855	+		AO353_09140	0.82	+0.7
2,008,855	+		AO353_09140	0.82	+1.3
2,008,855	+		AO353_09140	0.82	+1.4
2,008,855	+		AO353_09140	0.82	+1.3
2,008,855	+		AO353_09140	0.82	+3.5
2,008,855	+		AO353_09140	0.82	+2.3
2,008,856	-		AO353_09140	0.82	+0.3
2,008,856	-		AO353_09140	0.82	+2.0
2,008,856	-		AO353_09140	0.82	+1.3
2,008,867	+		AO353_09140	0.84	-2.4
2,008,867	+		AO353_09140	0.84	-0.5
2,008,868	-		AO353_09140	0.84	-1.0
2,008,868	-		AO353_09140	0.84	-0.0
2,008,868	-		AO353_09140	0.84	-1.2
2,008,868	-		AO353_09140	0.84	-0.0
2,008,868	-		AO353_09140	0.84	-1.4
2,008,868	-		AO353_09140	0.84	+0.7
2,008,868	-		AO353_09140	0.84	-0.0
2,008,908	-				-0.9
2,008,921	+				-2.8
2,008,960	+				+3.3
2,008,960	+				-2.4
2,008,961	-				-0.5
2,008,988	+				-0.0
2,008,998	+				+1.2
2,008,999	-				+0.7
2,009,019	+				-0.0
2,009,019	+				+1.3
2,009,019	+				-1.0
2,009,019	+				-1.5
2,009,019	+				-0.9
2,009,020	-				+1.4
2,009,020	-				+0.3
2,009,020	-				-1.7
2,009,020	-				+0.8
2,009,023	+				+0.3
2,009,023	+				+1.3
2,009,023	+				-1.7
2,009,023	+				+0.2
2,009,024	-				+2.1
2,009,024	-				-1.0
2,009,024	-				+2.7
2,009,095	+				-1.9
2,009,096	-				+0.9
2,010,170	-				-2.8
2,010,170	-				+2.1
2,010,170	-				-1.5
2,010,249	-				+1.8
2,010,265	+				+0.7
2,010,533	+		AO353_09150	0.81	-0.0
2,010,534	-		AO353_09150	0.81	+1.5
2,010,534	-		AO353_09150	0.81	+0.1
2,010,534	-		AO353_09150	0.81	+0.6
2,010,534	-		AO353_09150	0.81	+2.4
2,010,534	-		AO353_09150	0.81	+0.1
2,010,641	-				+1.5
2,010,641	-				-0.5
2,010,859	-		AO353_09155	0.22	-0.9
2,010,927	-		AO353_09155	0.27	-0.3
2,010,984	+		AO353_09155	0.32	+0.1
2,010,984	+		AO353_09155	0.32	-0.3
2,010,984	+		AO353_09155	0.32	-0.9
2,010,984	+		AO353_09155	0.32	-2.2
2,010,984	+		AO353_09155	0.32	-0.3
2,010,984	+		AO353_09155	0.32	+0.4
2,010,984	+		AO353_09155	0.32	-0.9
2,010,984	+		AO353_09155	0.32	-0.3
2,010,985	-		AO353_09155	0.32	-0.5
2,010,985	-		AO353_09155	0.32	+1.3
2,010,985	-		AO353_09155	0.32	+1.4
2,010,985	-		AO353_09155	0.32	+2.9
2,011,000	+		AO353_09155	0.33	+2.4
2,011,001	-		AO353_09155	0.33	+1.3
2,011,050	+		AO353_09155	0.37	-0.0
2,011,065	+		AO353_09155	0.38	+2.4
2,011,110	+		AO353_09155	0.41	+2.8
2,011,111	-		AO353_09155	0.41	-2.6
2,011,111	-		AO353_09155	0.41	-1.9
2,011,127	+		AO353_09155	0.43	+0.6
2,011,127	+		AO353_09155	0.43	+1.8
2,011,127	+		AO353_09155	0.43	-1.4
2,011,127	+		AO353_09155	0.43	-2.8
2,011,127	+		AO353_09155	0.43	-0.3
2,011,127	+		AO353_09155	0.43	+0.3
2,011,128	-		AO353_09155	0.43	-0.7
2,011,128	-		AO353_09155	0.43	+2.3
2,011,128	-		AO353_09155	0.43	+1.7
2,011,128	-		AO353_09155	0.43	+0.3
2,011,128	-		AO353_09155	0.43	-1.2
2,011,131	+		AO353_09155	0.43	-0.0
2,011,131	+		AO353_09155	0.43	-0.9
2,011,131	+		AO353_09155	0.43	-2.0