Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08900

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
1,955,053	+				-0.9
1,955,053	+				+3.0
1,955,053	+				+0.5
1,955,053	+				+4.5
1,955,053	+				-1.2
1,955,053	+				-0.0
1,955,053	+				-2.2
1,955,054	-				+0.7
1,955,054	-				+4.5
1,955,054	-				+2.9
1,955,054	-				+4.8
1,955,054	-				+4.2
1,955,054	-				-0.0
1,955,054	-				-1.2
1,955,054	-				-0.5
1,955,055	+				-0.4
1,955,055	+				-0.5
1,955,055	+				-2.4
1,955,055	+				-1.7
1,955,055	+				-0.0
1,955,055	+				+3.0
1,955,055	+				-0.0
1,955,056	-				-1.4
1,955,056	-				+3.9
1,955,056	-				+3.2
1,955,056	-				+3.7
1,955,067	-				+3.4
1,955,077	+				+1.7
1,955,077	+				-0.2
1,955,077	+				+1.8
1,955,077	+				-2.0
1,955,077	+				-0.7
1,955,077	+				+0.8
1,955,077	+				+2.2
1,955,077	+				+1.3
1,955,078	-				+3.2
1,955,078	-				+4.0
1,955,078	-				-0.5
1,955,078	-				+3.9
1,955,078	-				+5.6
1,955,078	-				-1.4
1,955,078	-				-1.7
1,955,078	-				+4.3
1,955,078	-				+0.5
1,955,078	-				-0.8
1,955,078	-				+4.2
1,955,078	-				+3.7
1,955,078	-				+1.3
1,955,078	-				-0.3
1,955,086	+				-1.4
1,955,086	+				-1.7
1,955,086	+				-0.5
1,955,086	+				+2.0
1,955,086	+				+1.6
1,955,086	+				-1.8
1,955,086	+				+2.1
1,955,086	+				-1.4
1,955,086	+				-1.4
1,955,087	-				+3.8
1,955,087	-				-1.5
1,955,087	-				+3.4
1,955,087	-				+1.3
1,955,087	-				+3.8
1,955,087	-				+5.1
1,955,087	-				+5.4
1,955,087	-				-1.2
1,955,087	-				+4.7
1,955,087	-				-1.2
1,955,087	-				+3.0
1,955,087	-				+4.1
1,955,087	-				+2.2
1,955,087	-				-0.5
1,955,087	-				+2.5
1,955,087	-				-0.0
1,955,108	-				+2.7
1,955,128	+				+2.6
1,955,128	+				+0.2
1,955,128	+				-1.4
1,955,129	-				+4.8
1,955,129	-				+3.2
1,955,129	-				+1.3
1,955,129	-				+4.1
1,955,185	+				+4.7
1,955,186	-				+6.5
1,955,186	-				+5.0
1,955,327	+		AO353_08895	0.17	+5.8
1,955,350	-				+2.3
1,955,393	+		AO353_08895	0.27	+2.3
1,955,394	-		AO353_08895	0.28	+1.3
1,955,394	-		AO353_08895	0.28	+6.0
1,955,583	-		AO353_08895	0.58	+5.8
1,955,589	+		AO353_08895	0.58	+7.3
1,955,590	-		AO353_08895	0.59	+7.6
1,955,599	+		AO353_08895	0.60	+7.0
1,955,599	+		AO353_08895	0.60	+6.5
1,955,600	-		AO353_08895	0.60	+6.1
1,955,642	+		AO353_08895	0.67	+6.2
1,955,690	+		AO353_08895	0.74	+4.9
1,955,690	+		AO353_08895	0.74	+6.4
1,955,691	-		AO353_08895	0.75	+7.6
1,955,691	-		AO353_08895	0.75	+3.9
1,955,783	+		AO353_08895	0.89	-0.9
1,955,783	+		AO353_08895	0.89	+0.7
1,955,783	+		AO353_08895	0.89	-1.8
1,955,783	+		AO353_08895	0.89	-0.9
1,955,783	+		AO353_08895	0.89	-0.5
1,955,783	+		AO353_08895	0.89	-1.6
1,955,783	+		AO353_08895	0.89	-1.8
1,955,783	+		AO353_08895	0.89	-1.9
1,955,783	+		AO353_08895	0.89	-3.4
1,955,784	-		AO353_08895	0.89	-2.2
1,955,784	-		AO353_08895	0.89	-1.3
1,955,784	-		AO353_08895	0.89	-2.5
1,955,784	-		AO353_08895	0.89	-0.9
1,955,784	-		AO353_08895	0.89	-1.0
1,955,784	-		AO353_08895	0.89	+3.3
1,955,834	-				+3.2
1,955,870	-				+2.8
1,955,870	-				-0.3
1,955,870	-				+1.3
1,955,896	+				-0.5
1,955,897	-				-0.9
1,955,897	-				-0.7
1,955,897	-				-1.3
1,955,897	-				-1.0
1,955,938	-				+2.6
1,956,118	+		AO353_08900	0.23	+1.6
1,956,118	+		AO353_08900	0.23	+1.6
1,956,118	+		AO353_08900	0.23	+1.7
1,956,118	+		AO353_08900	0.23	-0.5
1,956,119	-		AO353_08900	0.23	+1.1
1,956,119	-		AO353_08900	0.23	-0.0
1,956,119	-		AO353_08900	0.23	+1.3
1,956,119	-		AO353_08900	0.23	+3.0
1,956,119	-		AO353_08900	0.23	-0.0
1,956,119	-		AO353_08900	0.23	-1.2
1,956,119	-		AO353_08900	0.23	-1.2
1,956,119	-		AO353_08900	0.23	-0.2
1,956,136	+		AO353_08900	0.25	+2.5
1,956,136	+		AO353_08900	0.25	-2.5
1,956,136	+		AO353_08900	0.25	+2.1
1,956,136	+		AO353_08900	0.25	-2.0
1,956,136	+		AO353_08900	0.25	-1.3
1,956,136	+		AO353_08900	0.25	-1.2
1,956,136	+		AO353_08900	0.25	+1.4
1,956,136	+		AO353_08900	0.25	+0.5
1,956,136	+		AO353_08900	0.25	+0.3
1,956,137	-		AO353_08900	0.25	+2.6
1,956,137	-		AO353_08900	0.25	+4.2
1,956,159	-		AO353_08900	0.26	+5.0
1,956,160	+		AO353_08900	0.27	+3.7
1,956,160	+		AO353_08900	0.27	+0.3
1,956,160	+		AO353_08900	0.27	+0.3
1,956,160	+		AO353_08900	0.27	+1.8
1,956,160	+		AO353_08900	0.27	-2.7
1,956,160	+		AO353_08900	0.27	+3.5
1,956,160	+		AO353_08900	0.27	+1.7
1,956,160	+		AO353_08900	0.27	+0.4
1,956,160	+		AO353_08900	0.27	+1.3
1,956,160	+		AO353_08900	0.27	+4.1
1,956,160	+		AO353_08900	0.27	+1.5
1,956,160	+		AO353_08900	0.27	-0.8
1,956,160	+		AO353_08900	0.27	-0.7
1,956,160	+		AO353_08900	0.27	-2.4
1,956,160	+		AO353_08900	0.27	+1.3
1,956,160	+		AO353_08900	0.27	-0.0
1,956,160	+		AO353_08900	0.27	+3.7
1,956,160	+		AO353_08900	0.27	-1.0
1,956,160	+		AO353_08900	0.27	-0.9
1,956,161	-		AO353_08900	0.27	+3.0
1,956,161	-		AO353_08900	0.27	+2.1
1,956,161	-		AO353_08900	0.27	+1.3
1,956,161	-		AO353_08900	0.27	-1.2
1,956,161	-		AO353_08900	0.27	+2.1
1,956,161	-		AO353_08900	0.27	-1.2
1,956,161	-		AO353_08900	0.27	+2.7
1,956,161	-		AO353_08900	0.27	-1.2
1,956,161	-		AO353_08900	0.27	+1.4
1,956,161	-		AO353_08900	0.27	-1.5
1,956,161	-		AO353_08900	0.27	+2.7
1,956,161	-		AO353_08900	0.27	-0.7
1,956,161	-		AO353_08900	0.27	-0.3
1,956,161	-		AO353_08900	0.27	-0.9
1,956,161	-		AO353_08900	0.27	+1.6
1,956,161	-		AO353_08900	0.27	+3.9
1,956,161	-		AO353_08900	0.27	+0.7
1,956,161	-		AO353_08900	0.27	+2.3
1,956,161	-		AO353_08900	0.27	-0.7
1,956,161	-		AO353_08900	0.27	+2.9
1,956,161	-		AO353_08900	0.27	+3.6
1,956,161	-		AO353_08900	0.27	+5.9
1,956,161	-		AO353_08900	0.27	+4.2
1,956,161	-		AO353_08900	0.27	-2.0
1,956,161	-		AO353_08900	0.27	-1.8
1,956,161	-		AO353_08900	0.27	+1.2
1,956,161	-		AO353_08900	0.27	+2.1
1,956,233	-		AO353_08900	0.32	-1.8
1,956,327	+		AO353_08900	0.40	+2.9
1,956,327	+		AO353_08900	0.40	+0.3
1,956,328	-		AO353_08900	0.40	+2.7
1,956,328	-		AO353_08900	0.40	+3.7
1,956,328	-		AO353_08900	0.40	+1.6
1,956,337	+		AO353_08900	0.41	+0.4
1,956,337	+		AO353_08900	0.41	-0.3
1,956,337	+		AO353_08900	0.41	+0.3
1,956,337	+		AO353_08900	0.41	+2.3
1,956,337	+		AO353_08900	0.41	-1.7
1,956,337	+		AO353_08900	0.41	-1.7
1,956,337	+		AO353_08900	0.41	-2.4
1,956,337	+		AO353_08900	0.41	+1.1
1,956,337	+		AO353_08900	0.41	-1.1
1,956,337	+		AO353_08900	0.41	-0.0
1,956,338	-		AO353_08900	0.41	+0.2
1,956,338	-		AO353_08900	0.41	-1.8
1,956,338	-		AO353_08900	0.41	-0.5
1,956,338	-		AO353_08900	0.41	-0.3
1,956,338	-		AO353_08900	0.41	-1.2
1,956,338	-		AO353_08900	0.41	-0.0
1,956,338	-		AO353_08900	0.41	+1.5
1,956,338	-		AO353_08900	0.41	-1.3
1,956,452	+		AO353_08900	0.50	+0.9
1,956,453	-		AO353_08900	0.50	+1.3
1,956,453	-		AO353_08900	0.50	+1.3
1,956,453	-		AO353_08900	0.50	+0.3
1,956,469	+		AO353_08900	0.52	-3.1
1,956,469	+		AO353_08900	0.52	-1.3
1,956,469	+		AO353_08900	0.52	+1.1
1,956,469	+		AO353_08900	0.52	+0.8
1,956,469	+		AO353_08900	0.52	+0.7
1,956,469	+		AO353_08900	0.52	-0.3
1,956,469	+		AO353_08900	0.52	+2.3
1,956,469	+		AO353_08900	0.52	-1.2
1,956,469	+		AO353_08900	0.52	-2.2
1,956,469	+		AO353_08900	0.52	-1.5
1,956,469	+		AO353_08900	0.52	+1.6
1,956,469	+		AO353_08900	0.52	+1.1
1,956,469	+		AO353_08900	0.52	-0.9
1,956,469	+		AO353_08900	0.52	+3.2
1,956,470	-		AO353_08900	0.52	-1.4
1,956,470	-		AO353_08900	0.52	+0.5
1,956,470	-		AO353_08900	0.52	+2.6
1,956,470	-		AO353_08900	0.52	-0.8
1,956,470	-		AO353_08900	0.52	-0.5
1,956,470	-		AO353_08900	0.52	-1.8
1,956,470	-		AO353_08900	0.52	+2.8
1,956,470	-		AO353_08900	0.52	-0.3
1,956,470	-		AO353_08900	0.52	+5.7
1,956,470	-		AO353_08900	0.52	-1.9
1,956,470	-		AO353_08900	0.52	-1.4
1,956,470	-		AO353_08900	0.52	+1.3
1,956,470	-		AO353_08900	0.52	-0.7
1,956,484	+		AO353_08900	0.53	+0.3
1,956,484	+		AO353_08900	0.53	-2.3
1,956,484	+		AO353_08900	0.53	+1.3
1,956,484	+		AO353_08900	0.53	-0.5
1,956,484	+		AO353_08900	0.53	+0.7
1,956,484	+		AO353_08900	0.53	+0.9
1,956,484	+		AO353_08900	0.53	-0.6
1,956,484	+		AO353_08900	0.53	-1.2
1,956,484	+		AO353_08900	0.53	+0.2
1,956,485	-		AO353_08900	0.53	+1.3
1,956,485	-		AO353_08900	0.53	-1.6
1,956,485	-		AO353_08900	0.53	+1.2
1,956,485	-		AO353_08900	0.53	+2.8
1,956,485	-		AO353_08900	0.53	+1.0
1,956,485	-		AO353_08900	0.53	-0.3
1,956,485	-		AO353_08900	0.53	-2.4
1,956,485	-		AO353_08900	0.53	+0.8
1,956,485	-		AO353_08900	0.53	+1.8
1,956,485	-		AO353_08900	0.53	-1.8
1,956,589	+		AO353_08900	0.61	-1.9
1,956,589	+		AO353_08900	0.61	+2.3
1,956,590	-		AO353_08900	0.61	-1.5
1,956,590	-		AO353_08900	0.61	+1.8
1,956,590	-		AO353_08900	0.61	+3.8
1,956,590	-		AO353_08900	0.61	-0.9
1,956,590	-		AO353_08900	0.61	+1.8
1,956,718	+		AO353_08900	0.72	+0.3
1,956,718	+		AO353_08900	0.72	-0.5
1,956,718	+		AO353_08900	0.72	-0.5
1,956,718	+		AO353_08900	0.72	-0.2
1,956,718	+		AO353_08900	0.72	-1.9
1,956,718	+		AO353_08900	0.72	+1.1
1,956,718	+		AO353_08900	0.72	-1.6
1,956,719	-		AO353_08900	0.72	+2.0
1,956,719	-		AO353_08900	0.72	+2.4
1,956,719	-		AO353_08900	0.72	+1.3
1,956,719	-		AO353_08900	0.72	-1.2
1,956,719	-		AO353_08900	0.72	-0.3
1,956,719	-		AO353_08900	0.72	-0.9
1,956,719	-		AO353_08900	0.72	-0.4
1,956,719	-		AO353_08900	0.72	-0.3
1,956,719	-		AO353_08900	0.72	-0.5
1,956,719	-		AO353_08900	0.72	-0.3
1,956,719	-		AO353_08900	0.72	+0.3
1,956,719	-		AO353_08900	0.72	-1.8
1,956,793	+		AO353_08900	0.78	-2.8
1,956,793	+		AO353_08900	0.78	+0.7
1,956,794	-		AO353_08900	0.78	+2.2
1,956,796	+		AO353_08900	0.78	-0.7
1,956,796	+		AO353_08900	0.78	+0.1
1,956,796	+		AO353_08900	0.78	+1.7
1,956,796	+		AO353_08900	0.78	-1.0
1,956,796	+		AO353_08900	0.78	-2.5
1,956,796	+		AO353_08900	0.78	+0.3
1,956,796	+		AO353_08900	0.78	-1.6
1,956,796	+		AO353_08900	0.78	+2.0
1,956,797	-		AO353_08900	0.78	+1.8
1,956,797	-		AO353_08900	0.78	-0.5
1,956,797	-		AO353_08900	0.78	+1.0
1,956,797	-		AO353_08900	0.78	-0.8
1,956,797	-		AO353_08900	0.78	+0.5
1,956,797	-		AO353_08900	0.78	+2.0
1,956,797	-		AO353_08900	0.78	-0.5
1,956,797	-		AO353_08900	0.78	+1.3
1,956,808	+		AO353_08900	0.79	+0.5
1,956,808	+				+1.3
1,956,808	+		AO353_08900	0.79	+1.9
1,956,808	+		AO353_08900	0.79	-0.0
1,956,809	-		AO353_08900	0.79	-1.0
1,956,809	-		AO353_08900	0.79	-0.1
1,956,809	-		AO353_08900	0.79	-0.9
1,956,809	-		AO353_08900	0.79	-0.4
1,956,809	-		AO353_08900	0.79	+0.3
1,956,889	+		AO353_08900	0.86	+2.9
1,956,889	+		AO353_08900	0.86	-1.3
1,956,889	+		AO353_08900	0.86	+1.9
1,956,889	+		AO353_08900	0.86	+0.5
1,956,890	-		AO353_08900	0.86	-0.0
1,956,890	-		AO353_08900	0.86	-0.0
1,956,979	+				+1.3
1,956,980	-				-1.0
1,956,983	+				-0.3
1,956,983	+				-2.0
1,956,983	+				-2.0
1,956,983	+				-1.5
1,956,983	+				-0.0
1,956,983	+				-1.8
1,956,983	+				-2.0
1,956,983	+				-0.5
1,956,984	-				+0.3
1,956,984	-				+1.9
1,956,984	-				+1.6
1,956,984	-				+1.8
1,956,984	-				-1.2
1,956,984	-				-0.3
1,956,984	-				-2.8
1,956,984	-				-2.1
1,956,984	-				+0.3
1,957,051	+				-1.0
1,957,052	-				-1.9
1,957,052	-				-1.2
1,957,102	+				-1.6
1,957,102	+				-2.5
1,957,102	+				+0.3
1,957,102	+				+3.3
1,957,102	+				-0.7
1,957,102	+				-1.3
1,957,102	+				-0.4
1,957,102	+				-0.9
1,957,103	-				-0.2
1,957,103	-				+3.8
1,957,103	-				-1.7
1,957,103	-				+0.9
1,957,103	-				+4.0
1,957,103	-				-1.5
1,957,103	-				+3.1
1,957,103	-				+1.1
1,957,103	-				-1.6
1,957,103	-				-0.3
1,957,119	+				-0.0
1,957,119	+				+2.4
1,957,119	+				+0.4
1,957,119	+				+0.7
1,957,119	+				+2.0
1,957,119	+				+0.2
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1,957,120	-				+2.9
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1,957,157	-				+4.2
1,957,157	-				+2.1
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1,957,206	-				+2.8
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1,957,759	+		AO353_08905	0.86	-2.5
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1,957,762	-		AO353_08905	0.87	-0.6
1,957,762	-		AO353_08905	0.87	-0.5
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1,957,803	+				+0.7
1,957,803	+				+0.3
1,957,803	+				+2.1
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1,957,847	-				+1.0
1,958,019	-		AO353_08910	0.28	+0.3