Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08060

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
1,776,128	+				+4.1
1,776,128	+				-1.0
1,776,128	+				-1.6
1,776,190	+				-1.5
1,776,222	+		AO353_08055	0.12	-0.1
1,776,222	+		AO353_08055	0.12	-1.3
1,776,222	+		AO353_08055	0.12	-1.6
1,776,222	+		AO353_08055	0.12	-0.1
1,776,222	+		AO353_08055	0.12	-1.0
1,776,222	+		AO353_08055	0.12	-2.4
1,776,222	+		AO353_08055	0.12	+1.8
1,776,222	+		AO353_08055	0.12	-0.1
1,776,222	+		AO353_08055	0.12	-0.1
1,776,222	+		AO353_08055	0.12	-1.0
1,776,223	-		AO353_08055	0.13	-1.5
1,776,223	-		AO353_08055	0.13	-0.6
1,776,223	-		AO353_08055	0.13	-1.7
1,776,223	-		AO353_08055	0.13	-0.6
1,776,223	-		AO353_08055	0.13	+2.3
1,776,223	-		AO353_08055	0.13	+0.8
1,776,223	-		AO353_08055	0.13	-3.0
1,776,223	-		AO353_08055	0.13	+0.3
1,776,223	-		AO353_08055	0.13	-0.8
1,776,223	-		AO353_08055	0.13	-0.4
1,776,249	+		AO353_08055	0.15	+1.0
1,776,249	+		AO353_08055	0.15	-0.4
1,776,249	+		AO353_08055	0.15	+1.8
1,776,249	+		AO353_08055	0.15	-3.0
1,776,250	-		AO353_08055	0.16	+2.2
1,776,318	+		AO353_08055	0.23	+1.3
1,776,319	-		AO353_08055	0.23	-1.4
1,776,319	-		AO353_08055	0.23	-0.6
1,776,319	-		AO353_08055	0.23	-1.0
1,776,347	+		AO353_08055	0.26	-1.1
1,776,347	+		AO353_08055	0.26	-1.9
1,776,347	+		AO353_08055	0.26	+1.2
1,776,347	+		AO353_08055	0.26	+0.2
1,776,348	-		AO353_08055	0.26	+1.7
1,776,348	-		AO353_08055	0.26	-0.6
1,776,348	-		AO353_08055	0.26	-1.4
1,776,348	-		AO353_08055	0.26	-0.5
1,776,348	-		AO353_08055	0.26	+1.2
1,776,348	-		AO353_08055	0.26	-1.3
1,776,348	-		AO353_08055	0.26	+2.4
1,776,348	-		AO353_08055	0.26	+0.8
1,776,348	-		AO353_08055	0.26	-1.5
1,776,390	+		AO353_08055	0.31	+0.5
1,776,390	+		AO353_08055	0.31	-1.4
1,776,391	-		AO353_08055	0.31	-1.5
1,776,411	+		AO353_08055	0.33	-0.6
1,776,411	+		AO353_08055	0.33	-0.6
1,776,412	-		AO353_08055	0.33	+0.2
1,776,412	-		AO353_08055	0.33	-0.4
1,776,412	-		AO353_08055	0.33	-1.1
1,776,412	-		AO353_08055	0.33	+1.2
1,776,508	-		AO353_08055	0.44	-1.5
1,776,608	+		AO353_08055	0.55	-0.4
1,776,608	+		AO353_08055	0.55	-0.6
1,776,624	+		AO353_08055	0.57	+1.8
1,776,624	+		AO353_08055	0.57	-0.4
1,776,624	+		AO353_08055	0.57	-1.9
1,776,624	+		AO353_08055	0.57	+0.9
1,776,624	+		AO353_08055	0.57	-0.8
1,776,625	-		AO353_08055	0.57	-1.1
1,776,628	+		AO353_08055	0.57	-1.4
1,776,628	+		AO353_08055	0.57	-0.1
1,776,628	+		AO353_08055	0.57	-1.7
1,776,628	+		AO353_08055	0.57	-0.4
1,776,628	+		AO353_08055	0.57	+1.4
1,776,629	-		AO353_08055	0.57	-1.8
1,776,629	-		AO353_08055	0.57	+1.8
1,776,636	+		AO353_08055	0.58	-3.1
1,776,636	+		AO353_08055	0.58	+1.1
1,776,680	-		AO353_08055	0.63	-0.8
1,776,698	+		AO353_08055	0.65	-1.3
1,776,698	+		AO353_08055	0.65	-1.7
1,776,698	+		AO353_08055	0.65	+0.5
1,776,699	-		AO353_08055	0.65	+2.4
1,776,699	-		AO353_08055	0.65	-1.9
1,776,699	-		AO353_08055	0.65	-0.1
1,776,699	-		AO353_08055	0.65	-0.6
1,776,699	-		AO353_08055	0.65	+2.8
1,776,699	-		AO353_08055	0.65	+0.2
1,776,699	-		AO353_08055	0.65	-0.3
1,776,699	-		AO353_08055	0.65	+1.3
1,776,699	-		AO353_08055	0.65	+1.0
1,776,699	-		AO353_08055	0.65	+1.9
1,776,750	+		AO353_08055	0.71	+0.2
1,776,750	+		AO353_08055	0.71	+3.0
1,776,750	+		AO353_08055	0.71	+0.0
1,776,750	+		AO353_08055	0.71	-2.3
1,776,750	+		AO353_08055	0.71	-0.6
1,776,750	+		AO353_08055	0.71	-0.1
1,776,750	+		AO353_08055	0.71	+0.2
1,776,751	-		AO353_08055	0.71	+1.0
1,776,751	-		AO353_08055	0.71	-1.1
1,776,751	-		AO353_08055	0.71	-0.1
1,776,751	-		AO353_08055	0.71	-1.9
1,776,751	-		AO353_08055	0.71	-0.4
1,776,751	-		AO353_08055	0.71	-1.3
1,776,790	+		AO353_08055	0.75	+1.5
1,776,790	+		AO353_08055	0.75	+0.6
1,776,858	+		AO353_08055	0.83	-0.1
1,776,858	+		AO353_08055	0.83	-0.8
1,776,858	+		AO353_08055	0.83	-0.4
1,776,858	+		AO353_08055	0.83	+1.7
1,776,858	+		AO353_08055	0.83	+0.3
1,776,858	+		AO353_08055	0.83	-0.4
1,776,858	+		AO353_08055	0.83	+1.2
1,776,858	+		AO353_08055	0.83	-1.4
1,776,858	+		AO353_08055	0.83	+0.2
1,776,858	-		AO353_08055	0.83	+1.2
1,776,859	-		AO353_08055	0.83	-1.3
1,776,859	-		AO353_08055	0.83	+1.1
1,776,859	-		AO353_08055	0.83	-2.7
1,776,859	-		AO353_08055	0.83	-1.4
1,776,859	-		AO353_08055	0.83	+0.6
1,776,859	-		AO353_08055	0.83	-0.8
1,776,859	-		AO353_08055	0.83	+2.2
1,776,859	-		AO353_08055	0.83	+2.3
1,776,859	-		AO353_08055	0.83	-1.3
1,776,859	-		AO353_08055	0.83	+1.2
1,776,859	-		AO353_08055	0.83	+0.1
1,776,859	-		AO353_08055	0.83	-0.4
1,776,859	-		AO353_08055	0.83	+1.4
1,776,859	-		AO353_08055	0.83	+0.6
1,777,016	+				-0.8
1,777,016	+				+1.7
1,777,016	+				-0.8
1,777,016	+				+0.6
1,777,016	+				+0.5
1,777,016	+				-0.3
1,777,016	+				-0.4
1,777,017	-				+2.0
1,777,017	-				-0.4
1,777,017	-				-1.1
1,777,017	-				-1.0
1,777,039	+				-1.3
1,777,039	+				-2.6
1,777,039	+				-2.5
1,777,039	+				-2.5
1,777,039	+				+3.9
1,777,039	+				+3.3
1,777,040	-				+0.6
1,777,040	-				+0.6
1,777,040	-				-0.2
1,777,040	-				-1.3
1,777,040	-				-1.3
1,777,040	-				-1.0
1,777,040	-				-0.4
1,777,040	-				+2.2
1,777,040	-				-2.1
1,777,060	-				+0.2
1,777,196	+		AO353_08060	0.44	-1.1
1,777,196	+		AO353_08060	0.44	-1.0
1,777,196	+		AO353_08060	0.44	-0.5
1,777,196	+		AO353_08060	0.44	+0.6
1,777,197	-		AO353_08060	0.44	-1.0
1,777,197	-		AO353_08060	0.44	-0.1
1,777,357	+		AO353_08060	0.90	-0.4
1,777,377	+				-0.4
1,777,378	-				+1.6
1,777,378	-				-1.7
1,777,378	-				-0.4
1,777,437	+				-0.8
1,777,437	+				+0.2
1,777,437	+				+0.2
1,777,438	-				-0.2
1,777,438	-				-1.1
1,777,560	-		AO353_08065	0.11	-2.3
1,777,560	-		AO353_08065	0.11	-3.0
1,777,608	+		AO353_08065	0.15	-0.0
1,777,608	+		AO353_08065	0.15	-2.6
1,777,609	-		AO353_08065	0.15	-0.4
1,777,609	-		AO353_08065	0.15	-0.8
1,777,609	-		AO353_08065	0.15	-1.8
1,777,634	+		AO353_08065	0.17	-2.2
1,777,634	+		AO353_08065	0.17	+0.9
1,777,634	+		AO353_08065	0.17	-1.3
1,777,634	+		AO353_08065	0.17	+0.9
1,777,634	+		AO353_08065	0.17	+0.5
1,777,634	+		AO353_08065	0.17	+0.6
1,777,635	-		AO353_08065	0.17	-1.5
1,777,635	-		AO353_08065	0.17	+0.4
1,777,635	-		AO353_08065	0.17	+1.1
1,777,635	-		AO353_08065	0.17	-0.1
1,777,635	-		AO353_08065	0.17	-1.1
1,777,635	-		AO353_08065	0.17	-2.2
1,777,635	-		AO353_08065	0.17	-1.1
1,777,766	+		AO353_08065	0.28	+0.9
1,777,766	+		AO353_08065	0.28	-0.6
1,777,767	-		AO353_08065	0.28	-1.9
1,777,767	-		AO353_08065	0.28	+1.2
1,777,784	+		AO353_08065	0.29	-0.8
1,777,842	+		AO353_08065	0.34	-0.5
1,777,842	+		AO353_08065	0.34	-1.0
1,777,842	+		AO353_08065	0.34	-2.7
1,777,842	+		AO353_08065	0.34	+0.2
1,777,842	+		AO353_08065	0.34	+0.2
1,777,843	-		AO353_08065	0.34	-0.6
1,777,843	-		AO353_08065	0.34	-2.1
1,777,843	-		AO353_08065	0.34	+0.6
1,777,843	-		AO353_08065	0.34	+0.0
1,777,843	-		AO353_08065	0.34	-2.4
1,777,843	-		AO353_08065	0.34	-1.7
1,777,844	+		AO353_08065	0.34	-0.5
1,777,860	-		AO353_08065	0.35	-1.1
1,777,967	-		AO353_08065	0.44	-0.5
1,778,023	+		AO353_08065	0.49	-2.4
1,778,024	-		AO353_08065	0.49	-1.0
1,778,098	-		AO353_08065	0.55	-1.8
1,778,099	+		AO353_08065	0.55	+2.1
1,778,099	+		AO353_08065	0.55	+0.1
1,778,099	+		AO353_08065	0.55	-0.8
1,778,099	+		AO353_08065	0.55	+3.4
1,778,099	+		AO353_08065	0.55	-0.0
1,778,099	+		AO353_08065	0.55	+3.0
1,778,099	+		AO353_08065	0.55	+1.2
1,778,100	-		AO353_08065	0.55	-0.6
1,778,100	-		AO353_08065	0.55	-1.4
1,778,100	-		AO353_08065	0.55	-1.0
1,778,100	-		AO353_08065	0.55	-0.6
1,778,100	-		AO353_08065	0.55	+0.1
1,778,100	-		AO353_08065	0.55	-0.4
1,778,318	-		AO353_08065	0.72	-2.4
1,778,329	+		AO353_08065	0.73	-1.7
1,778,330	-		AO353_08065	0.73	-0.1
1,778,330	-		AO353_08065	0.73	-0.6
1,778,330	-		AO353_08065	0.73	-1.6
1,778,330	-		AO353_08065	0.73	-0.4