Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07590

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
1,671,632	+		AO353_07585	0.40	-0.1
1,671,632	+		AO353_07585	0.40	+2.4
1,671,632	+		AO353_07585	0.40	+1.7
1,671,632	+		AO353_07585	0.40	+2.1
1,671,632	+		AO353_07585	0.40	-1.6
1,671,632	+		AO353_07585	0.40	-2.0
1,671,632	+		AO353_07585	0.40	-2.8
1,671,633	-		AO353_07585	0.40	-0.7
1,671,633	-		AO353_07585	0.40	-1.5
1,671,633	-		AO353_07585	0.40	+1.8
1,671,633	-		AO353_07585	0.40	+1.0
1,671,633	-		AO353_07585	0.40	+2.6
1,671,702	+		AO353_07585	0.45	-0.9
1,671,702	+		AO353_07585	0.45	-1.5
1,671,703	-		AO353_07585	0.45	+0.5
1,671,703	-		AO353_07585	0.45	+1.1
1,671,703	-		AO353_07585	0.45	-0.5
1,671,703	-		AO353_07585	0.45	-1.8
1,671,703	-		AO353_07585	0.45	-0.5
1,671,703	-		AO353_07585	0.45	-0.5
1,671,703	-		AO353_07585	0.45	-0.9
1,671,703	-		AO353_07585	0.45	+1.4
1,671,703	-		AO353_07585	0.45	-2.1
1,671,724	+		AO353_07585	0.47	-0.0
1,671,724	+		AO353_07585	0.47	-0.2
1,671,724	+		AO353_07585	0.47	-0.2
1,671,725	-		AO353_07585	0.47	-0.2
1,671,725	-		AO353_07585	0.47	-1.4
1,671,725	-		AO353_07585	0.47	-1.5
1,671,725	-		AO353_07585	0.47	+1.1
1,671,725	-		AO353_07585	0.47	-2.7
1,671,725	-				+2.1
1,671,725	-		AO353_07585	0.47	+2.4
1,671,725	-		AO353_07585	0.47	-0.2
1,671,725	-		AO353_07585	0.47	-0.5
1,671,725	-		AO353_07585	0.47	+0.1
1,671,725	-		AO353_07585	0.47	-0.9
1,671,725	-		AO353_07585	0.47	-1.9
1,671,725	-		AO353_07585	0.47	+2.7
1,671,734	+		AO353_07585	0.47	+0.5
1,671,782	+		AO353_07585	0.51	+2.6
1,671,782	+		AO353_07585	0.51	-0.2
1,671,782	+		AO353_07585	0.51	+3.4
1,671,783	-		AO353_07585	0.51	+0.2
1,671,786	+		AO353_07585	0.51	+2.1
1,672,024	+		AO353_07585	0.69	-0.7
1,672,025	-		AO353_07585	0.69	+3.0
1,672,054	+		AO353_07585	0.71	+0.9
1,672,054	+		AO353_07585	0.71	-0.8
1,672,055	-		AO353_07585	0.71	+2.1
1,672,065	-		AO353_07585	0.72	+2.5
1,672,114	+		AO353_07585	0.75	+2.1
1,672,115	-		AO353_07585	0.75	+0.5
1,672,180	+		AO353_07585	0.80	+2.8
1,672,180	+		AO353_07585	0.80	+1.2
1,672,180	+		AO353_07585	0.80	-1.2
1,672,180	+		AO353_07585	0.80	+0.7
1,672,181	-		AO353_07585	0.80	-0.3
1,672,181	-		AO353_07585	0.80	+0.5
1,672,181	-		AO353_07585	0.80	-1.9
1,672,181	-		AO353_07585	0.80	+0.5
1,672,303	+		AO353_07585	0.89	+1.5
1,672,303	+		AO353_07585	0.89	-1.9
1,672,304	-		AO353_07585	0.89	+1.1
1,672,304	-		AO353_07585	0.89	-0.2
1,672,313	+		AO353_07585	0.90	-0.2
1,672,313	+		AO353_07585	0.90	+0.1
1,672,314	-		AO353_07585	0.90	-2.5
1,672,424	+				-0.2
1,672,424	+				-1.2
1,672,425	-				+3.4
1,672,505	+				-0.9
1,672,506	-				-2.4
1,672,506	-				+0.8
1,672,506	-				-2.6
1,672,562	+				+0.9
1,672,562	+				+1.7
1,672,562	+				-1.1
1,672,563	-				+0.2
1,672,563	-				-0.9
1,672,563	-				-0.5
1,672,563	-				+0.8
1,672,563	-				-0.0
1,672,567	+				+0.2
1,672,567	+				+2.6
1,672,568	-				+1.3
1,672,568	-				+0.1
1,672,568	-				+2.1
1,672,568	-				-0.9
1,672,644	+				-1.1
1,672,644	+				+0.1
1,672,645	-				-2.0
1,672,645	-				-0.2
1,672,661	+				+0.8
1,672,662	-				+0.5
1,672,662	-				-2.0
1,672,662	-				+1.5
1,672,682	+				+0.5
1,672,682	+				+1.3
1,672,682	+				-1.1
1,672,683	-				+0.1
1,672,683	-				-1.1
1,672,683	-				-1.1
1,672,683	-				+0.1
1,672,711	+		AO353_07590	0.10	-0.6
1,672,711	+		AO353_07590	0.10	-0.7
1,672,711	+		AO353_07590	0.10	-0.2
1,672,712	-		AO353_07590	0.10	+0.4
1,672,712	-		AO353_07590	0.10	+1.1
1,672,712	-		AO353_07590	0.10	-0.7
1,672,742	-		AO353_07590	0.12	-1.9
1,672,953	-		AO353_07590	0.27	+2.5
1,673,099	+		AO353_07590	0.37	-1.1
1,673,100	-		AO353_07590	0.38	+1.1
1,673,212	+		AO353_07590	0.45	-0.5
1,673,212	+		AO353_07590	0.45	+1.5
1,673,212	+		AO353_07590	0.45	+2.3
1,673,213	-				+1.1
1,673,213	-		AO353_07590	0.45	-0.5
1,673,213	-		AO353_07590	0.45	-0.5
1,673,213	-		AO353_07590	0.45	-1.5
1,673,213	-		AO353_07590	0.45	+1.3
1,673,213	-		AO353_07590	0.45	-1.7
1,673,213	-		AO353_07590	0.45	-0.2
1,673,213	-		AO353_07590	0.45	-0.7
1,673,224	+		AO353_07590	0.46	+0.5
1,673,224	+		AO353_07590	0.46	-1.6
1,673,224	+		AO353_07590	0.46	-0.9
1,673,224	+		AO353_07590	0.46	-1.4
1,673,225	-		AO353_07590	0.46	-2.2
1,673,225	-		AO353_07590	0.46	-1.2
1,673,225	-		AO353_07590	0.46	-0.6
1,673,225	-		AO353_07590	0.46	-0.9
1,673,225	-		AO353_07590	0.46	-0.4
1,673,428	+		AO353_07590	0.61	-1.5
1,673,429	-		AO353_07590	0.61	-0.0
1,673,461	+		AO353_07590	0.63	-0.2
1,673,461	+		AO353_07590	0.63	-0.7
1,673,461	+		AO353_07590	0.63	+0.4
1,673,461	+		AO353_07590	0.63	-1.1
1,673,461	+		AO353_07590	0.63	-0.5
1,673,461	+		AO353_07590	0.63	-2.2
1,673,461	+		AO353_07590	0.63	-1.1
1,673,462	-		AO353_07590	0.63	-0.7
1,673,462	-		AO353_07590	0.63	-1.5
1,673,596	+		AO353_07590	0.72	-1.5
1,673,596	+		AO353_07590	0.72	-0.9
1,673,596	+		AO353_07590	0.72	+0.1
1,673,617	+		AO353_07590	0.74	+1.8
1,673,617	+		AO353_07590	0.74	+2.9
1,673,617	+		AO353_07590	0.74	-1.1
1,673,617	+		AO353_07590	0.74	-0.2
1,673,617	+		AO353_07590	0.74	-1.5
1,673,617	+		AO353_07590	0.74	-0.5
1,673,618	-		AO353_07590	0.74	-1.2
1,673,618	-		AO353_07590	0.74	-0.3
1,673,618	-		AO353_07590	0.74	-0.2
1,673,618	-		AO353_07590	0.74	+0.1
1,673,618	-		AO353_07590	0.74	-1.2
1,673,618	-		AO353_07590	0.74	-0.2
1,673,618	-		AO353_07590	0.74	-2.4
1,673,639	-		AO353_07590	0.75	-1.8
1,673,639	-		AO353_07590	0.75	-1.1
1,673,639	-		AO353_07590	0.75	-0.1
1,673,656	-		AO353_07590	0.77	-2.3
1,673,701	+		AO353_07590	0.80	-1.5
1,673,701	+		AO353_07590	0.80	-1.4
1,673,701	+		AO353_07590	0.80	+0.4
1,673,701	+		AO353_07590	0.80	+1.1
1,673,701	+		AO353_07590	0.80	-1.1
1,673,701	+		AO353_07590	0.80	-1.2
1,673,702	-		AO353_07590	0.80	+0.6
1,673,702	-		AO353_07590	0.80	-0.5
1,673,702	-		AO353_07590	0.80	-0.9
1,673,702	-		AO353_07590	0.80	-1.7
1,673,702	-		AO353_07590	0.80	+0.1
1,673,702	-		AO353_07590	0.80	-2.1
1,673,702	-		AO353_07590	0.80	-1.6
1,673,705	+		AO353_07590	0.80	+0.5
1,673,705	+		AO353_07590	0.80	+2.5
1,673,705	+		AO353_07590	0.80	+0.1
1,673,705	+		AO353_07590	0.80	+1.7
1,673,705	+		AO353_07590	0.80	-2.4
1,673,705	+		AO353_07590	0.80	-1.6
1,673,706	-		AO353_07590	0.80	-2.6
1,673,706	-		AO353_07590	0.80	+0.1
1,673,706	-		AO353_07590	0.80	+2.1
1,673,929	+				+0.5
1,673,930	-				+2.1
1,673,952	+				+1.8
1,673,952	+				-1.4
1,673,952	+				-1.6
1,673,952	+				-1.5
1,673,952	+				-1.9
1,673,952	+				+0.8
1,673,952	+				-2.2
1,673,952	+				-0.2
1,673,952	+				+1.5
1,673,952	+				-3.0
1,673,952	+				-0.7
1,673,953	-				+0.1
1,673,953	-				-2.2
1,673,953	-				+0.5
1,673,953	-				-0.5
1,673,953	-				-1.8
1,673,953	-				-0.6
1,673,953	-				-0.5
1,673,953	-				-2.7
1,673,953	-				+3.3
1,673,953	-				+2.1
1,673,953	-				+0.4
1,673,953	-				-1.4
1,673,956	+				-1.4
1,673,956	+				-0.9
1,673,956	+				-0.5
1,673,956	+				+1.1
1,673,956	+				+0.5
1,673,956	+				+1.9
1,673,956	+				+1.4
1,673,956	+				-0.7
1,673,956	+				-1.2
1,673,956	+				-0.2
1,673,956	+				+0.9
1,673,957	-				-2.0
1,673,957	-				+2.1
1,673,957	-				+1.1
1,673,957	-				+1.9
1,673,957	-				-0.2
1,673,957	-				+3.8
1,673,957	-				+1.1
1,673,957	-				-1.1
1,673,957	-				+1.9
1,673,957	-				+0.1
1,673,957	-				+1.2
1,673,957	-				+1.4
1,673,957	-				+1.8
1,673,957	-				+2.0
1,673,957	-				-0.2
1,673,992	+				+1.1
1,673,992	+				+0.4
1,673,992	+				+0.7
1,673,992	+				-2.2
1,673,992	+				-0.2
1,673,993	-				+1.4
1,673,993	-				+0.5
1,673,993	-				+0.3
1,673,993	-				-0.7
1,673,993	-				-1.2
1,673,993	-				-0.5
1,674,006	+				-0.2
1,674,006	+				+4.1
1,674,006	+				-1.6
1,674,006	+				+0.6
1,674,006	+				+1.3
1,674,006	+				-0.2
1,674,006	+				-0.9
1,674,007	-				+0.3
1,674,007	-				-1.5
1,674,007	-				+1.8
1,674,375	+		AO353_07595	0.57	-0.2
1,674,375	+		AO353_07595	0.57	-2.1
1,674,375	+		AO353_07595	0.57	-1.5
1,674,375	+		AO353_07595	0.57	+1.7
1,674,375	+		AO353_07595	0.57	-1.1
1,674,376	-		AO353_07595	0.57	+0.8
1,674,376	-		AO353_07595	0.57	-0.2
1,674,376	-		AO353_07595	0.57	+0.5
1,674,475	+		AO353_07595	0.72	-0.8
1,674,475	+		AO353_07595	0.72	-0.9
1,674,476	-		AO353_07595	0.72	-0.5
1,674,476	-		AO353_07595	0.72	+4.0
1,674,623	-				-1.8
1,674,658	+				+0.1
1,674,658	+				+1.6
1,674,687	+				+1.4
1,674,687	+				-0.9
1,674,687	+				+0.7
1,674,688	-				+2.1
1,674,688	-				+0.6
1,674,688	-				-1.2
1,674,688	-				-1.2
1,674,688	-				-1.4
1,674,688	-				+1.3
1,674,688	-				-0.9
1,674,741	+				+1.2
1,674,741	+				+0.5
1,674,790	+		AO353_07600	0.12	-1.7
1,674,790	+		AO353_07600	0.12	-1.8
1,674,790	+		AO353_07600	0.12	-2.6
1,674,791	-		AO353_07600	0.13	+1.8
1,674,791	-		AO353_07600	0.13	-0.6
1,674,791	-		AO353_07600	0.13	+2.8
1,674,791	-		AO353_07600	0.13	+0.1
1,674,791	-		AO353_07600	0.13	-1.1
1,674,791	-		AO353_07600	0.13	+0.2
1,674,791	-		AO353_07600	0.13	+1.1
1,674,791	-		AO353_07600	0.13	+0.6
1,674,818	+		AO353_07600	0.18	+0.5