Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07410

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
1,629,481	+				+0.1
1,629,482	-				+2.1
1,629,482	-				+3.3
1,629,482	-				-0.5
1,629,482	-				-1.4
1,629,514	-				+2.7
1,629,524	+				-1.7
1,629,524	+				-1.7
1,629,524	+				+1.5
1,629,524	+				-1.0
1,629,524	+				-0.9
1,629,525	-				-0.8
1,629,525	-				-1.1
1,629,525	-				+0.5
1,629,525	-				+0.2
1,629,525	-				-1.7
1,629,525	-				+0.8
1,629,525	-				-1.1
1,629,537	+				-0.5
1,629,537	+				+1.6
1,629,542	+				-0.9
1,629,542	+				-0.5
1,629,542	+				-2.4
1,629,542	+				-1.9
1,629,542	+				-1.3
1,629,542	+				-1.9
1,629,542	+				+0.1
1,629,542	+				+0.5
1,629,542	+				-0.8
1,629,542	+				+0.7
1,629,543	-				-1.7
1,629,543	-				+2.4
1,629,543	-				-0.3
1,629,543	-				+0.1
1,629,543	-				+0.3
1,629,543	-				+1.9
1,629,543	-				+3.9
1,629,543	-				-0.8
1,629,543	-				+1.3
1,629,543	-				+1.1
1,629,543	-				-0.9
1,629,547	+				+0.1
1,629,547	+				+1.5
1,629,547	+				+0.8
1,629,547	+				-2.9
1,629,547	+				-0.9
1,629,548	-				+1.2
1,629,548	-				-2.7
1,629,569	+				-1.9
1,629,569	+				+3.1
1,629,569	+				-1.5
1,629,569	+				+1.5
1,629,569	+				-0.3
1,629,569	+				+2.1
1,629,569	+				-1.4
1,629,569	+				+1.5
1,629,569	+				-1.1
1,629,570	-				-0.9
1,629,570	-				+0.5
1,629,570	-				-0.3
1,629,570	-				+5.2
1,629,570	-				+0.6
1,629,589	+				+1.4
1,629,590	-				+1.5
1,629,619	+				+1.6
1,629,619	+				-1.1
1,629,619	+				+0.5
1,629,619	+				+0.1
1,629,662	+				-1.7
1,629,663	-				+2.6
1,629,674	+				-1.5
1,629,674	+				-0.9
1,629,674	+				-1.4
1,629,674	+				-0.5
1,629,675	-				+0.6
1,629,675	-				-0.8
1,629,690	-				-0.3
1,629,725	+				+1.6
1,629,725	+				+2.4
1,629,736	+				+2.1
1,629,736	+				+0.5
1,629,736	+				-2.3
1,629,737	-				-0.4
1,629,737	-				-1.1
1,629,737	-				-1.4
1,629,737	-				-2.9
1,629,737	-				-0.9
1,629,737	-				-1.1
1,629,737	-				+2.1
1,629,737	-				+0.1
1,629,738	+				-0.4
1,629,738	+				-0.3
1,629,738	+				-0.8
1,629,738	+				+0.4
1,629,738	+				-0.9
1,629,738	+				+1.3
1,629,738	+				-2.7
1,629,738	+				-1.7
1,629,738	+				-1.5
1,629,738	+				-0.5
1,629,738	+				+0.5
1,629,738	+				+1.9
1,629,738	+				-1.8
1,629,738	+				-0.3
1,629,739	-				+0.1
1,629,739	-				-0.5
1,629,739	-				-1.7
1,629,739	-				-0.3
1,629,739	-				-0.5
1,629,739	-				+2.1
1,629,739	-				-0.8
1,629,739	-				-2.8
1,629,739	-				-0.9
1,629,739	-				+0.1
1,629,739	-				+0.4
1,629,739	-				+0.2
1,629,749	+				-1.5
1,629,750	-				+0.6
1,629,750	-				+1.5
1,629,750	-				-0.9
1,629,813	+				-0.3
1,629,813	+				+0.5
1,629,813	+				-0.5
1,629,828	-				+1.1
1,629,894	+				-1.9
1,629,905	+				+0.1
1,629,910	+				-0.5
1,629,911	-				-1.1
1,629,911	-				+3.4
1,629,911	-				+0.5
1,629,911	-				-1.3
1,629,911	-				+0.9
1,629,911	-				+1.3
1,629,938	+				+2.1
1,629,938	+				-0.3
1,629,954	+				-0.3
1,629,954	+				+1.5
1,629,954	+				-2.2
1,629,954	+				+4.9
1,629,954	+				+0.1
1,629,954	+				-1.4
1,629,954	+				-0.4
1,629,955	-				-1.9
1,629,955	-				+0.1
1,629,955	-				+0.5
1,629,955	-				+2.6
1,629,955	-				-1.4
1,629,955	-				+1.6
1,629,955	-				-0.8
1,629,955	-				-2.0
1,629,955	-				-1.3
1,629,958	-				+0.6
1,629,958	-				-1.8
1,629,982	+				-1.0
1,629,982	+				+4.1
1,629,982	+				+1.6
1,629,982	+				-2.3
1,629,982	+				+1.1
1,629,982	+				-0.8
1,629,982	+				+2.1
1,629,982	+				-1.1
1,629,982	+				+0.5
1,629,982	+				-0.5
1,630,008	-				-2.4
1,630,013	+				-0.4
1,630,013	+				-0.5
1,630,013	+				-1.9
1,630,013	+				-2.0
1,630,014	-				-1.4
1,630,014	-				-1.8
1,630,014	-				-0.9
1,630,036	-				-2.2
1,630,036	-				-1.7
1,630,036	-				+0.6
1,630,036	-				+2.2
1,630,036	-				+2.7
1,630,036	-				-1.3
1,630,036	-				+1.1
1,630,036	-				+0.7
1,630,146	+				-0.8
1,630,147	-				+1.1
1,630,147	-				+1.6
1,630,147	-				+3.7
1,630,175	+				-0.9
1,630,175	+				+1.9
1,630,175	+				+0.7
1,630,200	+				-1.1
1,630,200	+				-0.5
1,630,200	+				+0.1
1,630,200	+				+1.6
1,630,200	+				-0.3
1,630,200	+				-1.7
1,630,200	+				-0.3
1,630,200	+				-1.4
1,630,200	+				-1.5
1,630,200	+				-0.1
1,630,200	+				-0.8
1,630,200	+				+0.5
1,630,200	+				+0.2
1,630,200	+				+0.6
1,630,200	+				+0.1
1,630,200	+				-1.9
1,630,200	+				-0.1
1,630,200	+				-1.2
1,630,200	+				+0.1
1,630,200	+				+0.2
1,630,200	+				+0.5
1,630,200	+				+1.2
1,630,200	+				+0.1
1,630,200	+				-1.4
1,630,200	+				+0.1
1,630,201	-				+1.1
1,630,201	-				-1.3
1,630,201	-				-0.3
1,630,201	-				+3.1
1,630,201	-				+1.9
1,630,201	-				+0.7
1,630,201	-				+2.3
1,630,201	-				+1.1
1,630,201	-				+2.5
1,630,201	-				-0.3
1,630,201	-				+0.6
1,630,201	-				+3.0
1,630,201	-				-1.8
1,630,201	-				-0.5
1,630,201	-				-0.9
1,630,201	-				+1.8
1,630,201	-				+0.5
1,630,201	-				+0.5
1,630,201	-				+3.0
1,630,201	-				-0.9
1,630,201	-				-2.2
1,630,201	-				+2.2
1,630,201	-				-0.8
1,630,204	+				-1.7
1,630,204	+				+0.1
1,630,204	+				+1.6
1,630,205	-				-1.1
1,630,255	+				-2.0
1,630,255	+				-1.5
1,630,255	+				+0.1
1,630,255	+				-1.4
1,630,255	+				-2.8
1,630,256	-				+1.0
1,630,256	-				+0.8
1,630,256	-				-0.3
1,630,256	-				+0.5
1,630,278	+				+0.7
1,630,278	+				-0.9
1,630,315	-				+0.1
1,630,365	+				+0.1
1,630,366	-				-0.9
1,630,366	-				-2.0
1,630,366	-				+2.7
1,630,366	-				-0.9
1,630,366	-				+0.5
1,630,402	+				+0.5
1,630,402	+				+1.3
1,630,402	+				-0.5
1,630,402	+				+1.6
1,630,402	+				+2.5
1,630,402	+				-2.9
1,630,403	-				+4.2
1,630,403	-				+0.5
1,630,442	+				+1.9
1,630,442	+				-1.9
1,630,442	+				+3.0
1,630,443	-				+0.6
1,630,443	-				-0.8
1,630,443	-				+0.8
1,630,522	+				+0.5
1,630,522	+				-1.9
1,630,522	+				+1.7
1,630,522	+				-1.9
1,630,522	+				+3.7
1,630,523	-				-0.8
1,630,523	-				+0.1
1,630,523	-				-0.3
1,630,523	-				-0.9
1,630,523	-				+1.3
1,630,523	-				-1.8
1,630,526	+				+3.0
1,630,526	+				+3.6
1,630,526	+				-1.5
1,630,526	+				+2.1
1,630,526	+				-2.1
1,630,526	+				-1.1
1,630,527	-				+2.9
1,630,527	-				+0.1
1,630,527	-				+2.1
1,630,527	-				+2.6
1,630,527	-				+0.8
1,630,527	-				-1.1
1,630,527	-				+0.8
1,630,527	-				-0.1
1,630,527	-				-1.3
1,630,527	-				+0.6
1,630,527	-				+1.1
1,630,527	-				+2.5
1,630,527	-				+1.2
1,630,527	-				-1.5
1,630,558	-				-0.1
1,630,558	-				-0.5
1,630,558	-				+2.8
1,630,697	+		AO353_07410	0.27	-1.1
1,630,697	+		AO353_07410	0.27	-0.3
1,630,698	-		AO353_07410	0.27	-0.3
1,630,698	-		AO353_07410	0.27	-2.0
1,630,705	+		AO353_07410	0.28	+2.8
1,630,706	-		AO353_07410	0.28	-1.9
1,630,706	-		AO353_07410	0.28	+2.5
1,630,740	+		AO353_07410	0.33	-1.3
1,630,741	-		AO353_07410	0.33	+1.9
1,630,741	-		AO353_07410	0.33	+0.1
1,630,827	+		AO353_07410	0.44	+1.5
1,630,827	+		AO353_07410	0.44	-1.4
1,630,827	+		AO353_07410	0.44	+1.1
1,630,827	+		AO353_07410	0.44	-0.5
1,630,828	-		AO353_07410	0.44	-1.3
1,630,828	-		AO353_07410	0.44	+2.7
1,630,828	-		AO353_07410	0.44	+3.0
1,630,828	-		AO353_07410	0.44	+3.5
1,630,828	-		AO353_07410	0.44	+0.2
1,630,828	-		AO353_07410	0.44	-0.8
1,630,828	-		AO353_07410	0.44	-0.5
1,630,828	-				+0.1
1,630,828	-		AO353_07410	0.44	+3.7
1,630,829	+		AO353_07410	0.44	+3.6
1,630,829	+		AO353_07410	0.44	-0.5
1,630,829	+		AO353_07410	0.44	+2.9
1,630,830	-		AO353_07410	0.44	+4.9
1,630,836	+		AO353_07410	0.45	-0.3
1,630,850	-		AO353_07410	0.46	-1.4
1,630,897	-		AO353_07410	0.52	-1.3
1,630,909	+		AO353_07410	0.54	+1.9
1,630,988	+		AO353_07410	0.64	+2.9
1,630,988	+		AO353_07410	0.64	+1.7
1,630,988	+		AO353_07410	0.64	+2.2
1,630,988	+		AO353_07410	0.64	+1.1
1,630,988	+		AO353_07410	0.64	+0.5
1,630,988	+		AO353_07410	0.64	+2.8
1,630,988	+		AO353_07410	0.64	+0.5
1,630,989	-		AO353_07410	0.64	+3.2
1,630,989	-		AO353_07410	0.64	-0.5
1,630,989	-		AO353_07410	0.64	+2.4
1,630,989	-		AO353_07410	0.64	-1.3
1,630,989	-		AO353_07410	0.64	+3.9
1,630,989	-		AO353_07410	0.64	-0.1
1,630,989	-		AO353_07410	0.64	-0.8
1,630,998	+		AO353_07410	0.65	-0.4
1,630,998	+		AO353_07410	0.65	-1.1
1,630,999	-		AO353_07410	0.65	-0.8
1,630,999	-		AO353_07410	0.65	-0.5
1,630,999	-		AO353_07410	0.65	+0.7
1,631,009	+		AO353_07410	0.66	-0.3
1,631,010	-		AO353_07410	0.67	-1.1
1,631,010	-		AO353_07410	0.67	-0.3
1,631,075	+		AO353_07410	0.75	-3.0
1,631,075	+		AO353_07410	0.75	+2.4
1,631,076	-		AO353_07410	0.75	-1.9
1,631,076	-		AO353_07410	0.75	+0.6
1,631,098	-		AO353_07410	0.78	+3.1
1,631,192	+		AO353_07410	0.89	+0.1
1,631,192	+		AO353_07410	0.89	+3.6
1,631,192	+		AO353_07410	0.89	+1.1
1,631,193	-		AO353_07410	0.90	-0.9
1,631,193	-		AO353_07410	0.90	-1.3
1,631,193	-		AO353_07410	0.90	+2.3
1,631,212	+				-1.3
1,631,212	+				+1.1
1,631,212	+				-1.3
1,631,213	-				-1.4
1,631,213	-				+0.1
1,631,240	-				+5.8
1,631,241	+				-1.4
1,631,241	+				+0.5
1,631,241	+				+3.8
1,631,242	-				-0.5
1,631,242	-				-1.5
1,631,242	-				+1.1
1,631,302	+				-1.1
1,631,303	-				-1.3
1,631,602	+		AO353_07415	0.47	+0.9
1,631,602	+		AO353_07415	0.47	+2.2
1,631,602	+		AO353_07415	0.47	+0.2
1,631,602	+		AO353_07415	0.47	+2.2
1,631,603	-		AO353_07415	0.48	+0.5
1,631,603	-		AO353_07415	0.48	-1.5
1,631,603	-		AO353_07415	0.48	+0.2
1,631,603	-		AO353_07415	0.48	+0.5
1,631,603	-		AO353_07415	0.48	+0.8
1,631,603	-		AO353_07415	0.48	+6.3
1,631,642	+		AO353_07415	0.56	-1.9
1,631,642	+		AO353_07415	0.56	-0.9
1,631,642	+		AO353_07415	0.56	+1.9
1,631,642	+		AO353_07415	0.56	+0.3
1,631,643	-		AO353_07415	0.56	-0.3
1,631,643	-		AO353_07415	0.56	+1.4
1,631,643	-		AO353_07415	0.56	-0.3
1,631,643	-		AO353_07415	0.56	-2.0
1,631,707	+		AO353_07415	0.70	-0.1
1,631,707	+		AO353_07415	0.70	+1.4
1,631,708	-		AO353_07415	0.70	-1.0
1,631,708	-		AO353_07415	0.70	+0.9
1,631,708	-		AO353_07415	0.70	-1.3
1,631,708	-		AO353_07415	0.70	+1.1
1,631,902	-				-0.9
1,631,905	-				-1.6
1,631,914	+				-2.7
1,631,914	+				-1.6
1,631,923	+				-0.5
1,631,923	+				-0.5
1,631,924	-				-0.6
1,631,924	-				+0.2
1,631,945	+				+0.1
1,631,945	+				+1.1
1,631,945	+				+0.5
1,631,945	+				-1.6
1,631,946	-				+2.1
1,631,946	-				-0.5
1,631,946	-				+2.0
1,631,946	-				+1.1
1,631,946	-				-2.4
1,631,946	-				+3.6
1,631,948	-				+0.1
1,631,948	-				+2.3
1,631,948	-				+1.7
1,632,017	+				-0.3
1,632,018	-				+0.1
1,632,091	+				+3.3
1,632,091	+				-1.9
1,632,091	+				+0.5
1,632,091	+				+2.2
1,632,091	+				-0.3
1,632,092	-				-0.3
1,632,098	+				-0.8
1,632,098	+				-0.5
1,632,098	+				+2.5
1,632,099	-				+0.1
1,632,099	-				-3.0
1,632,146	+				-1.0
1,632,168	+		AO353_07420	0.11	-1.1
1,632,204	+		AO353_07420	0.13	+0.5
1,632,204	+		AO353_07420	0.13	+1.1
1,632,205	-		AO353_07420	0.13	+1.7