Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06550

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
1,455,001	+				+2.6
1,455,001	+				-0.5
1,455,001	+				+3.4
1,455,001	+				+2.5
1,455,002	-				-2.3
1,455,002	-				-0.5
1,455,002	-				-1.3
1,455,002	-				+3.6
1,455,002	-				+0.5
1,455,002	-				-2.7
1,455,002	-				-0.3
1,455,002	-				-0.3
1,455,163	+		AO353_06540	0.57	+0.5
1,455,187	+		AO353_06540	0.66	-1.1
1,455,188	-		AO353_06540	0.66	+0.5
1,455,188	-		AO353_06540	0.66	+0.0
1,455,188	-		AO353_06540	0.66	+0.2
1,455,273	+				-1.0
1,455,273	+				-0.5
1,455,273	+				+0.0
1,455,273	+				-0.3
1,455,273	+				+1.4
1,455,273	+				-0.5
1,455,273	+				+0.2
1,455,273	+				-1.0
1,455,273	+				+0.0
1,455,273	+				-1.7
1,455,273	+				+0.0
1,455,274	-				+0.0
1,455,274	-				+0.2
1,455,274	-				+2.3
1,455,274	-				+0.5
1,455,278	+				-1.8
1,455,278	+				+0.7
1,455,278	+				-0.5
1,455,278	+				-2.0
1,455,278	+				+1.0
1,455,278	+				-1.5
1,455,278	+				-1.1
1,455,278	+				-1.0
1,455,278	+				-2.3
1,455,278	+				-1.1
1,455,279	-				+1.0
1,455,279	-				+0.7
1,455,279	-				+3.0
1,455,279	-				+0.5
1,455,987	-				-2.7
1,456,011	-				-2.1
1,456,100	-		AO353_06550	0.14	+2.6
1,456,100	-		AO353_06550	0.14	+1.9
1,456,100	-		AO353_06550	0.14	-1.3
1,456,277	-		AO353_06550	0.27	-2.2
1,456,277	-		AO353_06550	0.27	+0.0
1,456,277	-		AO353_06550	0.27	+1.0
1,456,277	-		AO353_06550	0.27	-1.7
1,456,277	-		AO353_06550	0.27	-1.1
1,456,359	-		AO353_06550	0.34	-0.3
1,456,375	-		AO353_06550	0.35	-2.2
1,456,375	-		AO353_06550	0.35	-1.0
1,456,375	-		AO353_06550	0.35	-1.8
1,456,375	-		AO353_06550	0.35	-1.5
1,456,375	-		AO353_06550	0.35	-1.8
1,456,375	-		AO353_06550	0.35	-0.2
1,456,375	-		AO353_06550	0.35	-1.3
1,456,375	-		AO353_06550	0.35	+0.5
1,456,375	-		AO353_06550	0.35	+2.6
1,456,375	-		AO353_06550	0.35	+1.0
1,456,375	-		AO353_06550	0.35	-0.8
1,456,375	-		AO353_06550	0.35	-1.0
1,456,730	-		AO353_06550	0.61	+1.0
1,456,772	-		AO353_06550	0.64	-1.3
1,456,772	-		AO353_06550	0.64	+0.5
1,456,772	-		AO353_06550	0.64	-2.1
1,456,994	-		AO353_06550	0.81	-1.5
1,456,994	-		AO353_06550	0.81	-0.5
1,456,994	-		AO353_06550	0.81	-1.5
1,456,994	-		AO353_06550	0.81	-1.3
1,456,994	-		AO353_06550	0.81	+1.0
1,457,013	+		AO353_06550	0.82	+1.3
1,457,014	-		AO353_06550	0.82	-0.3
1,457,014	-		AO353_06550	0.82	-1.1
1,457,014	-		AO353_06550	0.82	-2.0
1,457,014	-		AO353_06550	0.82	-1.1
1,457,014	-		AO353_06550	0.82	+0.4
1,457,014	-		AO353_06550	0.82	+0.6
1,457,014	-		AO353_06550	0.82	-0.5
1,457,014	-		AO353_06550	0.82	-2.2
1,457,014	-		AO353_06550	0.82	-2.5
1,457,018	-		AO353_06550	0.82	-2.3
1,457,018	-		AO353_06550	0.82	-0.5
1,457,018	-		AO353_06550	0.82	-1.5
1,457,018	-		AO353_06550	0.82	-2.0
1,457,099	-		AO353_06550	0.88	-1.8
1,457,099	-		AO353_06550	0.88	-2.2
1,457,099	-		AO353_06550	0.88	-2.3
1,457,099	-		AO353_06550	0.88	+0.0
1,457,099	-		AO353_06550	0.88	+0.5
1,457,235	-				-1.3
1,457,235	-				+0.0
1,457,244	-				-1.3
1,457,244	-				-0.3
1,457,244	-				-1.0
1,457,244	-				-1.5
1,457,256	-				+1.8
1,457,256	-				+0.0
1,457,256	-				+0.5
1,457,256	-				-0.5
1,457,256	-				-2.1
1,457,267	+				-1.1
1,457,268	-				+0.2
1,457,268	-				-1.4
1,457,291	-				+1.6
1,457,291	-				+1.8
1,457,291	-				-1.1
1,457,314	+				-2.3
1,457,314	+				+0.0
1,457,369	-				+0.5
1,457,369	-				+1.0
1,457,470	+				+0.0
1,457,493	+				+0.4
1,457,493	+				+0.0
1,457,493	+				-1.9
1,457,494	-				-1.1
1,457,494	-				+0.0
1,457,494	-				-0.7
1,457,494	-				+0.0
1,457,494	-				+0.5
1,457,494	-				-0.8
1,457,494	-				-2.0
1,457,495	+				+0.2
1,457,495	+				-2.5
1,457,496	-				+0.0
1,457,533	-				+0.3
1,457,603	+				-1.1
1,457,658	+		AO353_06555	0.10	+1.2
1,457,759	+		AO353_06555	0.16	+0.0
1,457,760	-		AO353_06555	0.16	+2.2
1,457,760	-		AO353_06555	0.16	+2.1
1,457,760	-		AO353_06555	0.16	-1.7
1,457,906	+		AO353_06555	0.23	+2.5
1,457,906	+		AO353_06555	0.23	+2.2
1,457,906	+		AO353_06555	0.23	+0.3
1,457,907	-		AO353_06555	0.23	+1.0
1,457,907	-		AO353_06555	0.23	-2.2
1,457,907	-		AO353_06555	0.23	+2.6
1,457,907	-		AO353_06555	0.23	+0.5
1,457,907	-		AO353_06555	0.23	-2.8
1,457,907	-		AO353_06555	0.23	-3.2
1,457,907	-		AO353_06555	0.23	-1.8
1,458,037	+		AO353_06555	0.30	+2.4
1,458,037	+		AO353_06555	0.30	+1.0
1,458,037	+		AO353_06555	0.30	+2.0
1,458,037	+		AO353_06555	0.30	+2.0
1,458,037	+		AO353_06555	0.30	-1.1
1,458,037	+		AO353_06555	0.30	+0.0
1,458,037	+		AO353_06555	0.30	-2.4
1,458,038	-		AO353_06555	0.30	+0.5
1,458,038	-		AO353_06555	0.30	+1.0
1,458,040	+		AO353_06555	0.30	+0.0
1,458,040	+		AO353_06555	0.30	+2.6
1,458,041	-		AO353_06555	0.30	-0.5
1,458,041	-		AO353_06555	0.30	-0.8
1,458,041	-		AO353_06555	0.30	-0.3
1,458,041	-		AO353_06555	0.30	+0.4
1,458,041	-		AO353_06555	0.30	-1.1