Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05815

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
1,284,092	-				+3.3
1,284,172	+				+1.4
1,284,173	-				-1.7
1,284,195	+				-0.3
1,284,195	+				-1.3
1,284,195	+				+2.6
1,284,195	+				+0.0
1,284,196	-				-1.4
1,284,196	-				+0.0
1,284,196	-				+0.0
1,284,231	+				-0.3
1,284,232	-				+0.4
1,284,258	+				+1.5
1,284,258	+				+0.7
1,284,258	+				+0.0
1,284,258	+				-0.6
1,284,258	+				+0.4
1,284,258	+				-2.2
1,284,258	+				+3.0
1,284,258	+				+0.4
1,284,258	+				-0.3
1,284,258	+				+2.6
1,284,259	-				-1.7
1,284,259	-				-0.6
1,284,259	-				+0.4
1,284,259	-				+1.6
1,284,259	-				+1.2
1,284,259	-				+1.4
1,284,259	-				+0.7
1,284,314	+				+0.8
1,284,336	-				-0.8
1,284,448	+		AO353_05810	0.26	-1.3
1,284,449	-		AO353_05810	0.26	-2.5
1,284,683	+		AO353_05810	0.80	-0.6
1,284,683	+		AO353_05810	0.80	-1.6
1,284,683	+		AO353_05810	0.80	+0.1
1,284,683	+		AO353_05810	0.80	-1.1
1,284,684	-		AO353_05810	0.80	+0.0
1,284,684	-		AO353_05810	0.80	-1.8
1,284,684	-		AO353_05810	0.80	+0.8
1,284,751	+				-0.2
1,284,751	+				-1.3
1,284,751	+				+1.3
1,284,751	+				+1.0
1,284,751	+				+1.4
1,284,751	+				-1.0
1,284,752	-				-1.0
1,284,752	-				-1.0
1,284,752	-				-1.3
1,284,752	-				-0.8
1,284,752	-				+1.0
1,284,753	+				-1.8
1,284,753	+				+0.4
1,284,753	+				-0.6
1,284,753	+				+1.0
1,284,753	+				+2.2
1,284,754	-				+1.0
1,284,754	-				+1.4
1,284,754	-				-0.3
1,284,754	-				+3.0
1,284,754	-				-1.3
1,284,754	-				-0.3
1,284,754	-				+0.2
1,284,754	-				-1.3
1,284,797	+				+0.4
1,284,797	+				-0.8
1,284,797	+				-0.8
1,284,797	+				+1.7
1,284,798	-				+0.2
1,284,798	-				+0.9
1,284,798	-				-0.3
1,284,798	-				-0.6
1,284,798	-				+2.6
1,284,798	-				+1.0
1,284,804	+				-0.8
1,284,804	+				-0.1
1,284,804	+				-1.3
1,284,804	+				+0.8
1,284,804	+				-0.6
1,284,804	+				+1.7
1,284,804	+				-1.1
1,284,804	+				-1.3
1,284,804	+				-2.6
1,284,805	-				-0.3
1,284,805	-				-2.6
1,284,805	-				-0.7
1,284,805	-				+0.4
1,284,805	-				-1.1
1,284,850	+				+2.1
1,284,874	+				-1.3
1,284,874	+				+1.4
1,284,875	-				+0.3
1,284,875	-				+0.2
1,284,935	+				+2.9
1,284,935	+				-2.1
1,284,935	+				+0.4
1,284,936	-				-0.6
1,284,936	-				+1.9
1,284,936	-				+1.6
1,284,982	+				+1.2
1,284,983	-				-1.1
1,284,991	-				+1.5
1,284,991	-				+1.9
1,285,067	-		AO353_05815	0.16	-1.1
1,285,193	+		AO353_05815	0.59	+2.0
1,285,324	+				-0.3
1,285,324	+				-2.1
1,285,324	+				+0.0
1,285,324	+				+1.2
1,285,324	+				+1.0
1,285,325	-				+1.0
1,285,325	-				+0.8
1,285,325	-				+0.6
1,285,358	+				-0.1
1,285,358	+				+2.1
1,285,358	+				-1.1
1,285,358	+				+0.8
1,285,359	-				-1.6
1,285,359	-				-1.3
1,285,359	-				+0.0
1,285,359	-				+0.3
1,285,359	-				-1.5
1,285,604	+				-0.6
1,285,604	+				+2.4
1,285,604	+				-0.6
1,285,605	-				-1.8
1,285,605	-				+0.4
1,285,610	+				+0.8
1,285,610	+				-0.0
1,285,611	-				-1.2
1,285,611	-				-1.6
1,285,654	+				+0.2
1,285,654	+				-1.9
1,285,655	-				+0.4
1,285,655	-				-1.6
1,285,655	-				+0.0
1,285,655	-				+2.4
1,285,655	-				-1.0
1,285,748	+				+2.0
1,285,748	+				+3.7
1,285,748	+				-1.3
1,285,748	+				-0.3
1,285,748	+				-0.1
1,285,748	+				+1.7
1,285,748	+				-0.3
1,285,749	-				+0.4
1,285,749	-				-0.6
1,285,749	-				+0.4
1,285,749	-				+0.7
1,285,749	-				+1.2
1,285,749	-				-0.2
1,285,749	-				-2.0
1,285,749	-				+2.5
1,285,749	-				+3.8
1,285,749	-				+1.0
1,285,749	-				+3.4
1,285,749	-				+0.4
1,285,749	-				+1.9
1,285,749	-				+0.0
1,285,749	-				-2.1
1,285,749	-				+1.6
1,285,749	-				-1.8
1,285,749	-				+0.7
1,285,759	+				-2.3
1,285,759	+				-1.0
1,285,759	+				-0.3
1,285,759	+				+0.7
1,285,759	+				-1.3
1,285,759	+				+0.9
1,285,759	+				-0.6
1,285,759	+				-1.6
1,285,759	+				+0.9
1,285,759	+				-1.1
1,285,759	+				-0.8
1,285,759	+				-0.3
1,285,759	+				+0.4
1,285,759	+				+1.0
1,285,759	+				-1.4
1,285,759	+				+1.0
1,285,759	+				-1.0
1,285,759	+				-0.4
1,285,759	+				-2.8
1,285,759	+				-2.6
1,285,759	+				+0.4
1,285,760	-				-0.8
1,285,760	-				+0.3
1,285,760	-				-0.6
1,285,760	-				+0.0
1,285,760	-				-0.8
1,285,760	-				+0.4
1,285,760	-				+2.1
1,285,760	-				+2.6
1,285,760	-				-0.3
1,285,760	-				+2.9
1,285,760	-				+0.0
1,285,760	-				-1.9
1,285,760	-				-1.6
1,285,760	-				-1.0
1,285,760	-				+0.4
1,285,760	-				-1.1
1,285,760	-				-1.0
1,285,760	-				+1.5
1,285,761	+				+0.0
1,285,761	+				+4.0
1,285,761	+				-1.4
1,285,761	+				+3.7
1,285,761	+				+0.6
1,285,761	+				-0.6
1,285,761	+				-1.4
1,285,762	-				-0.3
1,285,762	-				-1.1
1,285,762	-				+1.2
1,285,762	-				+1.4
1,285,762	-				+2.4
1,285,762	-				-1.0
1,285,762	-				-1.0
1,285,762	-				+1.3
1,286,066	+		AO353_05825	0.42	+0.0
1,286,067	-		AO353_05825	0.42	+0.0
1,286,092	+		AO353_05825	0.45	+0.6
1,286,092	+		AO353_05825	0.45	-2.4
1,286,092	+		AO353_05825	0.45	-0.6
1,286,093	-		AO353_05825	0.45	+0.0
1,286,093	-		AO353_05825	0.45	+0.0
1,286,159	+		AO353_05825	0.52	+2.4
1,286,160	-		AO353_05825	0.52	-1.6
1,286,160	-		AO353_05825	0.52	+0.4
1,286,256	+		AO353_05825	0.63	-2.0
1,286,256	+		AO353_05825	0.63	-1.6
1,286,256	+		AO353_05825	0.63	+1.0
1,286,256	+		AO353_05825	0.63	-2.1
1,286,256	+		AO353_05825	0.63	-1.9
1,286,257	-		AO353_05825	0.63	-1.8
1,286,257	-		AO353_05825	0.63	-1.4
1,286,257	-		AO353_05825	0.63	+1.2
1,286,257	-		AO353_05825	0.63	-1.0
1,286,257	-		AO353_05825	0.63	+1.5
1,286,257	-		AO353_05825	0.63	+2.0
1,286,257	-		AO353_05825	0.63	-0.3
1,286,257	-		AO353_05825	0.63	+5.6
1,286,257	-		AO353_05825	0.63	-0.3
1,286,300	+		AO353_05825	0.68	-2.1
1,286,300	+		AO353_05825	0.68	-1.4
1,286,300	+		AO353_05825	0.68	+1.0
1,286,300	+		AO353_05825	0.68	-0.1
1,286,300	+		AO353_05825	0.68	-0.2
1,286,300	+		AO353_05825	0.68	-1.7
1,286,300	+				+2.0
1,286,300	+		AO353_05825	0.68	-2.6
1,286,300	+		AO353_05825	0.68	-0.8
1,286,300	+		AO353_05825	0.68	+2.2
1,286,300	+		AO353_05825	0.68	-1.3
1,286,300	+		AO353_05825	0.68	+1.1
1,286,301	-		AO353_05825	0.68	-0.6
1,286,301	-		AO353_05825	0.68	-1.7
1,286,301	-		AO353_05825	0.68	-0.6
1,286,301	-		AO353_05825	0.68	+2.4
1,286,301	-		AO353_05825	0.68	+2.2
1,286,301	-		AO353_05825	0.68	-2.0
1,286,301	-		AO353_05825	0.68	+2.8
1,286,301	-		AO353_05825	0.68	-0.8