Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_00355

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
63,291	-		AO353_00345	0.84	+3.9
63,291	-		AO353_00345	0.84	-0.7
63,291	-		AO353_00345	0.84	+1.7
63,291	-		AO353_00345	0.84	-1.5
63,368	+				-0.7
63,368	+				-0.3
63,368	+				+2.2
63,369	-				+4.1
63,369	-				+2.4
63,369	-				-0.7
63,380	+				+1.7
63,380	+				-1.8
63,381	-				-0.7
63,381	-				-0.3
63,381	-				-0.3
63,460	-				+1.7
63,460	-				+2.7
63,489	+				-1.8
63,490	-				-1.5
63,490	-				-1.3
63,517	+				-0.9
63,517	+				-1.7
63,517	+				+2.7
63,517	+				+0.1
63,517	+				-0.7
63,517	+				+0.1
63,517	+				+0.4
63,518	-				+2.8
63,518	-				+0.1
63,518	-				+0.7
63,529	-				-0.7
63,542	-				+0.7
63,542	-				-0.9
63,542	-				+1.8
63,822	-		AO353_00350	0.60	+0.9
63,822	-		AO353_00350	0.60	+0.1
63,832	+		AO353_00350	0.62	-0.9
63,833	-		AO353_00350	0.62	-2.1
63,898	+		AO353_00350	0.73	+2.4
63,898	+		AO353_00350	0.73	-2.1
63,898	+		AO353_00350	0.73	+0.7
63,898	+		AO353_00350	0.73	+0.7
63,898	+		AO353_00350	0.73	-0.3
63,899	-		AO353_00350	0.74	+0.7
63,899	-		AO353_00350	0.74	+0.1
63,899	-		AO353_00350	0.74	-2.1
63,899	-		AO353_00350	0.74	+0.9
63,899	-		AO353_00350	0.74	-0.9
63,899	-		AO353_00350	0.74	-1.7
63,963	+		AO353_00350	0.85	-1.3
63,963	+		AO353_00350	0.85	+0.7
63,963	+		AO353_00350	0.85	+0.7
63,963	+		AO353_00350	0.85	+2.1
63,963	+		AO353_00350	0.85	-0.3
63,964	-		AO353_00350	0.85	+0.1
63,964	-		AO353_00350	0.85	+2.5
63,964	-		AO353_00350	0.85	+2.7
64,022	+				-1.2
64,023	-				+0.7
64,088	+				-0.3
64,088	+				-0.9
64,089	-				-1.5
64,089	-				+2.7
64,091	+				-0.2
64,091	+				-0.7
64,091	+				-0.7
64,091	+				+0.7
64,091	+				-0.5
64,091	+				-1.2
64,092	-				-0.9
64,092	-				-0.9
64,125	+				+1.7
64,125	+				-1.2
64,126	-				+0.7
64,126	-				+2.7
64,126	-				-1.5
64,136	-				+0.5
64,136	-				+0.7
64,166	+				+0.1
64,166	+				+1.7
64,166	+				-2.2
64,166	+				+1.8
64,167	-				+3.1
64,167	-				+0.7
64,168	+				-1.2
64,197	-				+1.7
64,243	+				-0.3
64,243	+				+1.7
64,243	+				+0.9
64,244	-				-0.3
64,244	-				-0.8
64,244	-				-1.3
64,333	+		AO353_00355	0.19	-1.3
64,334	-		AO353_00355	0.20	+1.5
64,493	-		AO353_00355	0.43	+0.1
64,547	+		AO353_00355	0.51	-2.1
64,547	+		AO353_00355	0.51	+1.1
64,547	+		AO353_00355	0.51	-0.7
64,548	-		AO353_00355	0.51	-2.3
64,836	+				+2.7
64,841	+				+1.2
64,842	-				+0.3
64,856	-				-1.8
65,242	-		AO353_00360	0.27	+2.1
65,250	+		AO353_00360	0.27	-0.3
65,250	+		AO353_00360	0.27	+2.1
65,251	-		AO353_00360	0.27	+2.0
65,538	-		AO353_00360	0.48	+0.1
65,682	+		AO353_00360	0.59	+0.4
65,751	+		AO353_00360	0.64	-2.1
65,751	+		AO353_00360	0.64	-2.5
65,751	+		AO353_00360	0.64	-1.3
65,752	-		AO353_00360	0.64	+2.0
65,752	-		AO353_00360	0.64	+1.7
65,838	+		AO353_00360	0.70	-1.3
65,839	-		AO353_00360	0.70	-1.3
65,839	-		AO353_00360	0.70	+1.1
65,839	-		AO353_00360	0.70	+0.1