Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_00265

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
45,854	+				+0.4
45,854	+				-0.3
45,854	+				-2.2
45,854	+				+2.0
45,854	+				-0.7
45,854	+				-0.2
45,854	+				+0.5
45,855	-				-1.1
45,855	-				-1.5
45,855	-				+0.1
45,855	-				+1.0
45,855	-				+1.2
45,855	-				+2.0
45,855	-				+2.7
45,855	-				+0.1
45,855	-				+1.2
45,855	-				+1.3
45,876	+				-2.7
45,876	+				+0.1
45,987	-				-0.3
46,071	-		AO353_00255	0.44	-1.9
46,071	-		AO353_00255	0.44	+3.0
46,071	-		AO353_00255	0.44	-1.9
46,071	-		AO353_00255	0.44	+1.7
46,071	-		AO353_00255	0.44	-1.3
46,071	-		AO353_00255	0.44	-0.9
46,071	-		AO353_00255	0.44	+1.0
46,075	-		AO353_00255	0.45	-0.3
46,075	-		AO353_00255	0.45	-1.5
46,086	-		AO353_00255	0.47	+2.0
46,086	-		AO353_00255	0.47	-2.3
46,102	-		AO353_00255	0.50	+1.3
46,355	+				+2.1
46,363	+				-1.1
46,364	-				-0.3
46,364	-				-0.7
46,439	+		AO353_00260	0.28	+0.1
46,439	+		AO353_00260	0.28	+0.7
46,440	-		AO353_00260	0.28	+1.5
46,477	+		AO353_00260	0.39	+0.7
46,603	-		AO353_00260	0.73	-1.5
46,603	-		AO353_00260	0.73	+0.1
46,646	-		AO353_00260	0.85	-1.3
46,646	-		AO353_00260	0.85	-0.9
46,700	-				-0.7
46,714	-				+2.5
46,714	-				+2.3
46,714	-				-0.3
46,714	-				-1.2
46,714	-				-0.7
46,880	-		AO353_00265	0.45	+1.3
46,968	-		AO353_00265	0.83	-1.9
46,968	-		AO353_00265	0.83	-2.0
46,968	-		AO353_00265	0.83	-1.2
46,968	-		AO353_00265	0.83	-2.9
47,005	+				-0.7
47,035	+				-1.3
47,035	+				-2.3
47,035	+				-0.2
47,035	+				+0.5
47,035	+				+1.4
47,035	+				-0.7
47,035	+				-1.3
47,036	-				+0.7
47,036	-				-0.7
47,036	-				-1.2
47,036	-				-1.7
47,036	-				-2.2
47,036	-				-0.4
47,038	+				+1.1
47,038	+				+0.1
47,038	+				+0.1
47,039	-				-1.2
47,039	-				-0.2
47,039	-				+2.2
47,088	+				-0.7
47,088	+				-2.4
47,088	+				+1.3
47,088	+				+0.7
47,088	+				+0.3
47,088	+				+0.1
47,088	+				-1.3
47,088	+				+1.0
47,088	+				+0.7
47,089	-				-2.7
47,089	-				+0.9
47,089	-				+0.9
47,089	-				-1.7
47,089	-				-1.3
47,133	+				+1.1
47,133	+				-0.3
47,133	+				-0.1
47,133	+				-0.2
47,133	+				-0.9
47,134	-				-0.3
47,134	-				+1.7
47,134	-				-2.3
47,134	-				+1.7
47,134	-				-1.8
47,192	+				-1.2
47,193	-				+1.7
47,204	-				-1.3
47,204	-				+0.7
47,214	+				+0.6
47,214	+				+0.1
47,215	-				+2.9
47,215	-				+1.7
47,215	-				-1.2
47,215	-				+0.6
47,289	+		AO353_00270	0.10	-1.3
47,290	-		AO353_00270	0.10	-1.2
47,290	-		AO353_00270	0.10	-0.3
47,290	-		AO353_00270	0.10	-0.9
47,316	-		AO353_00270	0.11	+2.8
47,316	-		AO353_00270	0.11	-0.3
47,316	-		AO353_00270	0.11	-2.1
47,339	+		AO353_00270	0.12	+0.7
47,340	-		AO353_00270	0.12	+0.8
47,340	-		AO353_00270	0.12	+0.1
47,352	+		AO353_00270	0.13	+3.0
47,352	+		AO353_00270	0.13	-1.2
47,353	-		AO353_00270	0.13	-0.4
47,353	-		AO353_00270	0.13	-1.1
47,355	+		AO353_00270	0.13	+0.3
47,355	+		AO353_00270	0.13	-0.8
47,356	-		AO353_00270	0.13	-0.9
47,356	-		AO353_00270	0.13	+0.1
47,401	+		AO353_00270	0.15	-2.5
47,487	+		AO353_00270	0.18	-2.7
47,487	+		AO353_00270	0.18	+0.9
47,487	+		AO353_00270	0.18	-0.3
47,488	-		AO353_00270	0.18	+0.7
47,488	-		AO353_00270	0.18	-1.2
47,488	-		AO353_00270	0.18	+1.8
47,488	-		AO353_00270	0.18	+1.8
47,653	+		AO353_00270	0.24	-2.2
47,654	-		AO353_00270	0.24	-1.3
47,721	+		AO353_00270	0.26	+0.8
47,721	+		AO353_00270	0.26	+1.7
47,721	+		AO353_00270	0.26	+0.1
47,721	+		AO353_00270	0.26	+2.7
47,721	+		AO353_00270	0.26	-0.9
47,722	-		AO353_00270	0.26	-0.7
47,722	-		AO353_00270	0.26	-1.3
47,722	-		AO353_00270	0.26	-0.7
47,722	-		AO353_00270	0.26	+0.7
47,722	-		AO353_00270	0.26	-0.4
47,722	-		AO353_00270	0.26	-0.7
47,741	+		AO353_00270	0.27	-0.3
47,884	+		AO353_00270	0.32	+1.2
47,884	+		AO353_00270	0.32	+0.7
47,885	-		AO353_00270	0.32	+0.7
47,885	-		AO353_00270	0.32	-0.7
47,885	-		AO353_00270	0.32	-0.7
47,885	-		AO353_00270	0.32	+0.1