Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2263

Experiment: Doxycycline hyclate 0.00078125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.00078125 mg/ml
2,330,238	+		Synpcc7942_2262	0.32	+0.4
2,330,246	-		Synpcc7942_2262	0.33	-0.8
2,330,248	+		Synpcc7942_2262	0.33	+0.7
2,330,248	+		Synpcc7942_2262	0.33	+1.6
2,330,248	+		Synpcc7942_2262	0.33	-1.0
2,330,257	-		Synpcc7942_2262	0.33	-0.2
2,330,259	+				+0.4
2,330,259	+		Synpcc7942_2262	0.33	+0.5
2,330,267	-		Synpcc7942_2262	0.34	+1.2
2,330,281	+		Synpcc7942_2262	0.35	+0.3
2,330,295	+		Synpcc7942_2262	0.36	+0.3
2,330,296	+		Synpcc7942_2262	0.36	-1.7
2,330,304	-		Synpcc7942_2262	0.37	-0.3
2,330,327	+		Synpcc7942_2262	0.38	+1.5
2,330,329	-		Synpcc7942_2262	0.38	-1.1
2,330,379	+		Synpcc7942_2262	0.42	+0.4
2,330,393	+		Synpcc7942_2262	0.43	-0.0
2,330,393	+		Synpcc7942_2262	0.43	-1.7
2,330,401	-		Synpcc7942_2262	0.44	+0.3
2,330,406	+		Synpcc7942_2262	0.44	+0.3
2,330,406	+		Synpcc7942_2262	0.44	-1.4
2,330,414	-		Synpcc7942_2262	0.44	-0.9
2,330,414	-		Synpcc7942_2262	0.44	-0.3
2,330,414	-		Synpcc7942_2262	0.44	-0.1
2,330,421	+		Synpcc7942_2262	0.45	-2.1
2,330,424	-		Synpcc7942_2262	0.45	-0.5
2,330,429	-		Synpcc7942_2262	0.46	-0.6
2,330,429	-		Synpcc7942_2262	0.46	+1.4
2,330,429	-		Synpcc7942_2262	0.46	+1.2
2,330,436	+		Synpcc7942_2262	0.46	+0.2
2,330,437	+		Synpcc7942_2262	0.46	-0.7
2,330,443	-		Synpcc7942_2262	0.47	-1.1
2,330,476	+		Synpcc7942_2262	0.49	+0.6
2,330,482	+		Synpcc7942_2262	0.49	+0.4
2,330,488	-		Synpcc7942_2262	0.50	-0.3
2,330,488	-		Synpcc7942_2262	0.50	+1.5
2,330,502	+		Synpcc7942_2262	0.51	-2.1
2,330,510	-		Synpcc7942_2262	0.51	-0.1
2,330,511	+		Synpcc7942_2262	0.51	-0.0
2,330,516	+		Synpcc7942_2262	0.52	+0.9
2,330,524	-		Synpcc7942_2262	0.52	+0.6
2,330,569	-		Synpcc7942_2262	0.55	-0.1
2,330,580	+		Synpcc7942_2262	0.56	+0.4
2,330,592	-		Synpcc7942_2262	0.57	-1.7
2,330,592	-		Synpcc7942_2262	0.57	+0.5
2,330,593	-		Synpcc7942_2262	0.57	+2.4
2,330,593	-		Synpcc7942_2262	0.57	+1.9
2,330,593	-		Synpcc7942_2262	0.57	+0.4
2,330,597	+		Synpcc7942_2262	0.57	-0.4
2,330,608	+		Synpcc7942_2262	0.58	-1.3
2,330,608	+		Synpcc7942_2262	0.58	+1.9
2,330,608	+		Synpcc7942_2262	0.58	-1.7
2,330,608	+		Synpcc7942_2262	0.58	+1.3
2,330,608	+		Synpcc7942_2262	0.58	-0.8
2,330,608	+		Synpcc7942_2262	0.58	-0.1
2,330,608	+				+0.4
2,330,608	+		Synpcc7942_2262	0.58	+2.9
2,330,608	+		Synpcc7942_2262	0.58	-0.9
2,330,608	+		Synpcc7942_2262	0.58	+0.6
2,330,615	+		Synpcc7942_2262	0.59	+0.6
2,330,616	-		Synpcc7942_2262	0.59	-3.3
2,330,616	-		Synpcc7942_2262	0.59	-1.7
2,330,616	-		Synpcc7942_2262	0.59	+0.4
2,330,616	-		Synpcc7942_2262	0.59	+0.1
2,330,616	-		Synpcc7942_2262	0.59	-0.3
2,330,616	-		Synpcc7942_2262	0.59	-0.8
2,330,616	-		Synpcc7942_2262	0.59	+0.4
2,330,616	-		Synpcc7942_2262	0.59	-1.1
2,330,616	-		Synpcc7942_2262	0.59	+1.2
2,330,616	-		Synpcc7942_2262	0.59	+0.3
2,330,663	+		Synpcc7942_2262	0.62	+0.4
2,330,671	-		Synpcc7942_2262	0.63	+0.3
2,330,702	-		Synpcc7942_2262	0.65	-0.9
2,330,718	+		Synpcc7942_2262	0.66	-0.4
2,330,718	+		Synpcc7942_2262	0.66	+0.1
2,330,731	+		Synpcc7942_2262	0.67	+0.6
2,330,755	+		Synpcc7942_2262	0.69	-0.8
2,330,768	-		Synpcc7942_2262	0.70	+0.9
2,330,789	+		Synpcc7942_2262	0.71	-0.5
2,330,817	+		Synpcc7942_2262	0.73	-1.1
2,330,831	+		Synpcc7942_2262	0.74	-0.9
2,330,833	+		Synpcc7942_2262	0.74	+1.4
2,330,833	+		Synpcc7942_2262	0.74	-0.4
2,330,833	+		Synpcc7942_2262	0.74	-1.0
2,330,846	-		Synpcc7942_2262	0.75	+0.9
2,330,855	+		Synpcc7942_2262	0.76	-0.4
2,330,861	+		Synpcc7942_2262	0.76	-0.8
2,330,896	+		Synpcc7942_2262	0.79	+1.2
2,330,910	-		Synpcc7942_2262	0.80	+0.3
2,330,926	+		Synpcc7942_2262	0.81	+0.6
2,330,938	+		Synpcc7942_2262	0.82	+0.9
2,330,938	+		Synpcc7942_2262	0.82	+0.6
2,330,949	+		Synpcc7942_2262	0.82	-0.5
2,330,957	-		Synpcc7942_2262	0.83	-0.9
2,330,957	-		Synpcc7942_2262	0.83	+0.6
2,330,958	-		Synpcc7942_2262	0.83	+0.2
2,330,975	-		Synpcc7942_2262	0.84	+0.3
2,331,001	-		Synpcc7942_2262	0.86	-0.1
2,331,004	+		Synpcc7942_2262	0.86	+0.9
2,331,071	-				-2.6
2,331,079	+				-0.1
2,331,250	-				-0.5
2,331,260	+				+0.4
2,331,260	+				-1.7
2,331,265	-				-2.1
2,331,265	-				+2.7
2,331,268	-				+1.1
2,332,551	+				+0.4
2,332,561	-				-1.0
2,332,594	-				-1.1
2,332,631	+				+1.3
2,332,636	+				+0.9
2,332,639	-				-0.8
2,332,643	-				-2.1
2,332,652	+				+0.5
2,332,662	-				+0.8
2,332,701	+		Synpcc7942_2264	0.17	+0.3
2,332,709	-		Synpcc7942_2264	0.20	-0.2
2,332,713	+		Synpcc7942_2264	0.21	+0.3
2,332,720	-		Synpcc7942_2264	0.24	-0.5
2,332,738	-		Synpcc7942_2264	0.30	+0.9
2,332,746	-		Synpcc7942_2264	0.33	+0.3
2,332,766	+		Synpcc7942_2264	0.41	-0.3
2,332,771	+		Synpcc7942_2264	0.42	-2.3
2,332,776	+		Synpcc7942_2264	0.44	+0.2
2,332,776	+		Synpcc7942_2264	0.44	-0.1
2,332,800	-		Synpcc7942_2264	0.53	-0.5
2,332,959	-				-0.4
2,332,969	+				+1.3
2,332,969	+				-1.7
2,332,972	-				-1.5
2,333,028	+				+0.1
2,333,028	+				-2.0
2,333,036	-				+0.7
2,333,036	-				-0.7
2,333,073	-				+0.8
2,333,092	+				+1.9
2,333,092	+				-0.6
2,333,098	+				-1.1
2,333,100	-				+1.2
2,333,100	-				+0.4
2,333,100	-				+1.2
2,333,100	-				-2.9
2,333,108	+				-1.1
2,333,108	+				+0.1
2,333,108	+				-2.1
2,333,116	-				+1.9
2,333,116	-				+0.3
2,333,129	-				-0.4
2,333,129	-				+1.1
2,333,144	+				-0.1
2,333,152	-				-0.1
2,333,163	+				+1.1
2,333,163	+				+2.4
2,333,168	+				+1.0
2,333,169	-				+0.3
2,333,189	+				+1.4
2,333,205	-				+1.3
2,333,220	+				+0.6
2,333,231	-				-0.4
2,333,262	-				-1.6
2,333,264	+				+0.3
2,333,272	-				-0.6