Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2062

Experiment: Doxycycline hyclate 0.00078125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.00078125 mg/ml
2,137,592	+	ylmE	Synpcc7942_2060	0.13	-0.5
2,137,618	+	ylmE	Synpcc7942_2060	0.17	+0.0
2,137,652	+	ylmE	Synpcc7942_2060	0.22	-1.7
2,137,652	+	ylmE	Synpcc7942_2060	0.22	-0.5
2,137,652	+				+2.9
2,137,721	-	ylmE	Synpcc7942_2060	0.33	-0.1
2,137,726	+	ylmE	Synpcc7942_2060	0.33	-1.3
2,137,734	-	ylmE	Synpcc7942_2060	0.35	-0.2
2,137,734	-				-2.1
2,137,736	+	ylmE	Synpcc7942_2060	0.35	+0.1
2,137,736	+	ylmE	Synpcc7942_2060	0.35	-1.1
2,137,745	+	ylmE	Synpcc7942_2060	0.36	-0.6
2,137,752	+				-0.7
2,137,764	-	ylmE	Synpcc7942_2060	0.39	-1.7
2,137,783	+	ylmE	Synpcc7942_2060	0.42	-0.7
2,137,790	+	ylmE	Synpcc7942_2060	0.43	+0.3
2,137,791	-	ylmE	Synpcc7942_2060	0.43	-0.2
2,137,793	+	ylmE	Synpcc7942_2060	0.43	+0.9
2,137,816	-	ylmE	Synpcc7942_2060	0.47	-1.5
2,137,821	+	ylmE	Synpcc7942_2060	0.48	-0.4
2,137,827	+	ylmE	Synpcc7942_2060	0.48	+0.6
2,137,835	-	ylmE	Synpcc7942_2060	0.50	+2.2
2,137,880	+	ylmE	Synpcc7942_2060	0.56	-0.6
2,137,899	-	ylmE	Synpcc7942_2060	0.59	-1.1
2,137,899	-	ylmE	Synpcc7942_2060	0.59	-0.7
2,137,920	-	ylmE	Synpcc7942_2060	0.62	-2.3
2,137,938	+	ylmE	Synpcc7942_2060	0.65	-0.9
2,137,958	-	ylmE	Synpcc7942_2060	0.68	-0.3
2,137,998	-	ylmE	Synpcc7942_2060	0.74	-0.9
2,137,999	+				+0.5
2,138,049	+	ylmE	Synpcc7942_2060	0.82	-0.5
2,138,065	-	ylmE	Synpcc7942_2060	0.84	-0.7
2,138,107	+				-1.7
2,138,117	-				-1.1
2,138,117	-				-1.1
2,138,359	-	pipX	Synpcc7942_2061	0.61	-1.3
2,138,385	+	pipX	Synpcc7942_2061	0.71	-2.1
2,138,432	-	pipX	Synpcc7942_2061	0.88	-2.7
2,138,439	+				-0.4
2,138,459	+				-1.1
2,138,502	-				-0.1
2,138,526	+				-2.4
2,138,565	-				-3.1
2,139,832	+				+1.0
2,139,832	+				+1.2
2,139,832	-				-0.1
2,139,856	-				+0.5
2,139,856	-				+0.5
2,139,865	+				+1.5
2,139,914	+				-0.1
2,139,922	-				-0.9
2,139,924	+				-1.7
2,139,932	-				-1.1
2,139,932	-				-2.1
2,140,041	-	surE	Synpcc7942_2063	0.19	-2.4
2,140,052	+	surE	Synpcc7942_2063	0.21	-1.1
2,140,130	+	surE	Synpcc7942_2063	0.31	-1.7
2,140,130	+	surE	Synpcc7942_2063	0.31	+0.7
2,140,138	-	surE	Synpcc7942_2063	0.32	-3.2
2,140,179	+	surE	Synpcc7942_2063	0.37	-4.1
2,140,179	+	surE	Synpcc7942_2063	0.37	-1.4
2,140,203	-	surE	Synpcc7942_2063	0.40	-2.8
2,140,246	+	surE	Synpcc7942_2063	0.46	-1.1
2,140,270	-	surE	Synpcc7942_2063	0.49	+0.7
2,140,278	+	surE	Synpcc7942_2063	0.50	-3.5
2,140,278	+	surE	Synpcc7942_2063	0.50	-3.1
2,140,278	+	surE	Synpcc7942_2063	0.50	-0.8
2,140,278	+	surE	Synpcc7942_2063	0.50	+1.5
2,140,285	-	surE	Synpcc7942_2063	0.51	-1.7
2,140,286	-	surE	Synpcc7942_2063	0.51	-3.9
2,140,286	-	surE	Synpcc7942_2063	0.51	-0.1
2,140,286	-	surE	Synpcc7942_2063	0.51	-1.7
2,140,291	-	surE	Synpcc7942_2063	0.51	-0.4
2,140,314	+	surE	Synpcc7942_2063	0.54	-2.7
2,140,332	-	surE	Synpcc7942_2063	0.57	-2.9
2,140,341	-	surE	Synpcc7942_2063	0.58	-1.6
2,140,341	-	surE	Synpcc7942_2063	0.58	-3.1
2,140,349	+	surE	Synpcc7942_2063	0.59	-1.3
2,140,352	-	surE	Synpcc7942_2063	0.59	-1.1
2,140,369	-	surE	Synpcc7942_2063	0.62	-1.7
2,140,403	+	surE	Synpcc7942_2063	0.66	+0.5
2,140,411	-	surE	Synpcc7942_2063	0.67	-2.4
2,140,440	+	surE	Synpcc7942_2063	0.71	-0.5
2,140,440	+	surE	Synpcc7942_2063	0.71	-2.1
2,140,440	+	surE	Synpcc7942_2063	0.71	-2.4
2,140,440	+	surE	Synpcc7942_2063	0.71	-1.9
2,140,440	+	surE	Synpcc7942_2063	0.71	-3.3
2,140,440	+	surE	Synpcc7942_2063	0.71	-1.7
2,140,448	-	surE	Synpcc7942_2063	0.72	-3.4
2,140,448	-	surE	Synpcc7942_2063	0.72	-4.8
2,140,448	-	surE	Synpcc7942_2063	0.72	-2.4
2,140,451	+	surE	Synpcc7942_2063	0.72	-3.3
2,140,480	+	surE	Synpcc7942_2063	0.76	+0.9
2,140,493	-	surE	Synpcc7942_2063	0.77	-1.7
2,140,500	-	surE	Synpcc7942_2063	0.78	-1.9
2,140,524	-	surE	Synpcc7942_2063	0.81	-3.6
2,140,526	+	surE	Synpcc7942_2063	0.82	-2.9
2,140,527	+	surE	Synpcc7942_2063	0.82	-3.4
2,140,573	+	surE	Synpcc7942_2063	0.88	-2.1
2,140,581	+	surE	Synpcc7942_2063	0.89	-2.7
2,140,595	+				-3.4
2,140,605	+				-1.9
2,140,614	+				-1.1
2,140,720	-				-0.1
2,140,722	+				+0.3
2,140,722	+				-0.8
2,140,722	+				+1.5
2,140,722	+				-0.1
2,140,730	-				+1.9