Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2061

Experiment: Doxycycline hyclate 0.00078125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.00078125 mg/ml
2,137,207	-	cdv2	Synpcc7942_2059	0.89	-0.1
2,137,226	+				-2.1
2,137,276	+				-1.5
2,137,324	-				-0.5
2,137,324	-				-0.3
2,137,336	-				-2.9
2,137,340	+				+0.6
2,137,348	-				-2.1
2,137,348	-				-0.1
2,137,457	+				+1.0
2,137,465	-				+0.5
2,137,465	-				-0.6
2,137,539	-				-1.7
2,137,579	+	ylmE	Synpcc7942_2060	0.11	-0.5
2,137,592	+	ylmE	Synpcc7942_2060	0.13	-0.5
2,137,618	+	ylmE	Synpcc7942_2060	0.17	+0.0
2,137,652	+	ylmE	Synpcc7942_2060	0.22	-1.7
2,137,652	+	ylmE	Synpcc7942_2060	0.22	-0.5
2,137,652	+				+2.9
2,137,721	-	ylmE	Synpcc7942_2060	0.33	-0.1
2,137,726	+	ylmE	Synpcc7942_2060	0.33	-1.3
2,137,734	-	ylmE	Synpcc7942_2060	0.35	-0.2
2,137,734	-				-2.1
2,137,736	+	ylmE	Synpcc7942_2060	0.35	+0.1
2,137,736	+	ylmE	Synpcc7942_2060	0.35	-1.1
2,137,745	+	ylmE	Synpcc7942_2060	0.36	-0.6
2,137,752	+				-0.7
2,137,764	-	ylmE	Synpcc7942_2060	0.39	-1.7
2,137,783	+	ylmE	Synpcc7942_2060	0.42	-0.7
2,137,790	+	ylmE	Synpcc7942_2060	0.43	+0.3
2,137,791	-	ylmE	Synpcc7942_2060	0.43	-0.2
2,137,793	+	ylmE	Synpcc7942_2060	0.43	+0.9
2,137,816	-	ylmE	Synpcc7942_2060	0.47	-1.5
2,137,821	+	ylmE	Synpcc7942_2060	0.48	-0.4
2,137,827	+	ylmE	Synpcc7942_2060	0.48	+0.6
2,137,835	-	ylmE	Synpcc7942_2060	0.50	+2.2
2,137,880	+	ylmE	Synpcc7942_2060	0.56	-0.6
2,137,899	-	ylmE	Synpcc7942_2060	0.59	-1.1
2,137,899	-	ylmE	Synpcc7942_2060	0.59	-0.7
2,137,920	-	ylmE	Synpcc7942_2060	0.62	-2.3
2,137,938	+	ylmE	Synpcc7942_2060	0.65	-0.9
2,137,958	-	ylmE	Synpcc7942_2060	0.68	-0.3
2,137,998	-	ylmE	Synpcc7942_2060	0.74	-0.9
2,137,999	+				+0.5
2,138,049	+	ylmE	Synpcc7942_2060	0.82	-0.5
2,138,065	-	ylmE	Synpcc7942_2060	0.84	-0.7
2,138,107	+				-1.7
2,138,117	-				-1.1
2,138,117	-				-1.1
2,138,359	-	pipX	Synpcc7942_2061	0.61	-1.3
2,138,385	+	pipX	Synpcc7942_2061	0.71	-2.1
2,138,432	-	pipX	Synpcc7942_2061	0.88	-2.7
2,138,439	+				-0.4
2,138,459	+				-1.1
2,138,502	-				-0.1
2,138,526	+				-2.4
2,138,565	-				-3.1