Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1953

Experiment: Doxycycline hyclate 0.00078125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.00078125 mg/ml
2,024,793	-				+1.1
2,024,795	+				+0.3
2,024,813	+				-0.3
2,024,813	+				+0.5
2,024,813	+				+0.7
2,024,821	-				+1.0
2,024,909	+		Synpcc7942_1951	0.22	-2.1
2,024,917	-		Synpcc7942_1951	0.25	+0.4
2,024,917	-		Synpcc7942_1951	0.25	+2.2
2,024,917	-		Synpcc7942_1951	0.25	+2.5
2,024,917	-		Synpcc7942_1951	0.25	-1.1
2,024,949	-		Synpcc7942_1951	0.33	-0.3
2,024,956	+		Synpcc7942_1951	0.35	-1.1
2,024,965	-		Synpcc7942_1951	0.38	+0.3
2,024,975	-		Synpcc7942_1951	0.40	+0.3
2,025,018	+		Synpcc7942_1951	0.52	-1.8
2,025,065	+		Synpcc7942_1951	0.65	-0.5
2,025,091	+		Synpcc7942_1951	0.72	-0.1
2,025,091	+		Synpcc7942_1951	0.72	-1.1
2,025,099	-		Synpcc7942_1951	0.75	-3.1
2,025,108	+		Synpcc7942_1951	0.77	+0.5
2,025,108	+		Synpcc7942_1951	0.77	+0.1
2,025,125	+		Synpcc7942_1951	0.82	-1.1
2,025,131	+		Synpcc7942_1951	0.83	+1.7
2,025,133	-		Synpcc7942_1951	0.84	-1.7
2,025,142	+		Synpcc7942_1951	0.87	+1.2
2,025,155	-				-0.9
2,025,156	+				+0.6
2,025,184	+				-1.1
2,025,193	-				+0.1
2,025,227	-				-0.6
2,025,574	+		Synpcc7942_1952	0.51	-0.1
2,025,575	-		Synpcc7942_1952	0.51	-1.7
2,025,643	-		Synpcc7942_1952	0.71	-1.7
2,025,693	-		Synpcc7942_1952	0.86	-0.2
2,025,694	+		Synpcc7942_1952	0.86	-1.4
2,025,747	+				+0.7
2,025,771	-				-1.1
2,025,798	-				+1.9
2,025,799	-				-0.4
2,025,839	+		Synpcc7942_1953	0.12	-0.3
2,025,839	+		Synpcc7942_1953	0.12	-0.1
2,025,847	-		Synpcc7942_1953	0.14	-5.7
2,025,892	-		Synpcc7942_1953	0.26	-0.9
2,025,892	-		Synpcc7942_1953	0.26	-2.1
2,025,914	+		Synpcc7942_1953	0.31	-2.8
2,025,922	-		Synpcc7942_1953	0.33	-1.0
2,025,928	-		Synpcc7942_1953	0.35	-3.0
2,025,948	-		Synpcc7942_1953	0.40	-2.0
2,025,948	-		Synpcc7942_1953	0.40	-2.6
2,025,960	-		Synpcc7942_1953	0.43	-0.8
2,025,960	-		Synpcc7942_1953	0.43	-0.7
2,025,960	-		Synpcc7942_1953	0.43	-1.1
2,025,989	-		Synpcc7942_1953	0.51	-1.9
2,025,999	-		Synpcc7942_1953	0.53	-2.9
2,026,033	+		Synpcc7942_1953	0.62	-0.4
2,026,035	+		Synpcc7942_1953	0.63	-1.1
2,026,041	-		Synpcc7942_1953	0.64	-1.9
2,026,045	+		Synpcc7942_1953	0.65	-1.7
2,026,050	+		Synpcc7942_1953	0.66	-0.7
2,026,077	+		Synpcc7942_1953	0.73	-2.1
2,026,079	+		Synpcc7942_1953	0.74	-0.5
2,026,085	+		Synpcc7942_1953	0.75	-3.1
2,026,085	-		Synpcc7942_1953	0.75	-0.7
2,026,087	-		Synpcc7942_1953	0.76	-1.7
2,026,087	-		Synpcc7942_1953	0.76	-1.0
2,026,087	-		Synpcc7942_1953	0.76	-1.8
2,026,120	+		Synpcc7942_1953	0.84	-2.0
2,026,120	-		Synpcc7942_1953	0.84	-1.8
2,026,123	-		Synpcc7942_1953	0.85	-1.4
2,026,164	+				-1.7
2,026,208	-				+0.9
2,026,234	+				-1.1
2,026,239	+				-1.5
2,026,247	-				-3.5
2,026,252	-				-1.7