Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1411

Experiment: Doxycycline hyclate 0.00078125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.00078125 mg/ml
1,463,629	+				-0.1
1,463,639	+				-2.7
1,463,666	-				+2.2
1,463,705	+				-0.9
1,463,705	+				-3.7
1,463,713	-				-1.1
1,463,719	+				-4.5
1,463,720	+				-1.2
1,463,720	+				-1.3
1,463,727	-		Synpcc7942_1411	0.11	-0.6
1,463,731	+		Synpcc7942_1411	0.11	-0.1
1,463,733	-		Synpcc7942_1411	0.12	-2.0
1,463,749	-		Synpcc7942_1411	0.14	-2.1
1,463,756	+		Synpcc7942_1411	0.15	-0.7
1,463,764	-		Synpcc7942_1411	0.16	-1.1
1,463,789	+		Synpcc7942_1411	0.19	-1.1
1,463,797	-		Synpcc7942_1411	0.21	+0.7
1,463,818	+		Synpcc7942_1411	0.24	-1.3
1,463,854	-		Synpcc7942_1411	0.29	-3.4
1,463,891	-		Synpcc7942_1411	0.34	-1.7
1,463,891	-		Synpcc7942_1411	0.34	-3.4
1,463,896	-		Synpcc7942_1411	0.35	+0.1
1,463,945	+		Synpcc7942_1411	0.42	-0.1
1,463,958	-		Synpcc7942_1411	0.43	+0.6
1,464,007	-		Synpcc7942_1411	0.50	-0.5
1,464,017	-		Synpcc7942_1411	0.52	-1.6
1,464,042	-		Synpcc7942_1411	0.55	-2.0
1,464,049	+		Synpcc7942_1411	0.56	-3.8
1,464,049	+		Synpcc7942_1411	0.56	-1.3
1,464,049	-		Synpcc7942_1411	0.56	-2.9
1,464,051	+		Synpcc7942_1411	0.56	+0.1
1,464,051	+		Synpcc7942_1411	0.56	-1.8
1,464,059	-		Synpcc7942_1411	0.58	-1.1
1,464,119	+		Synpcc7942_1411	0.66	-3.1
1,464,119	+		Synpcc7942_1411	0.66	-0.3
1,464,142	-		Synpcc7942_1411	0.69	-0.9
1,464,164	+		Synpcc7942_1411	0.72	-1.7
1,464,208	+		Synpcc7942_1411	0.79	-0.1
1,464,208	+		Synpcc7942_1411	0.79	-0.1
1,464,209	+		Synpcc7942_1411	0.79	-1.3
1,464,211	-		Synpcc7942_1411	0.79	+0.4
1,464,216	-		Synpcc7942_1411	0.80	-1.4
1,464,216	-		Synpcc7942_1411	0.80	-1.2
1,464,290	+				-2.4
1,464,332	-				+0.2
1,464,360	+				+1.1
1,464,368	-				+0.9
1,464,371	+				+0.5
1,464,373	-				-1.5
1,464,395	-				-0.5
1,464,397	+				-0.1
1,464,453	+				-0.1
1,464,479	+		Synpcc7942_1412	0.25	+3.4
1,464,530	-		Synpcc7942_1412	0.36	-0.1
1,464,535	-		Synpcc7942_1412	0.37	+2.5
1,464,547	+				+0.6
1,464,553	-		Synpcc7942_1412	0.41	-0.1
1,464,577	+		Synpcc7942_1412	0.46	-0.7
1,464,611	+		Synpcc7942_1412	0.54	+0.1
1,464,672	-		Synpcc7942_1412	0.68	-1.7
1,464,673	-		Synpcc7942_1412	0.68	-0.6
1,464,690	+		Synpcc7942_1412	0.72	-1.1
1,464,695	+		Synpcc7942_1412	0.73	-0.6
1,464,695	+		Synpcc7942_1412	0.73	-1.8
1,464,695	+		Synpcc7942_1412	0.73	-1.8
1,464,697	+		Synpcc7942_1412	0.73	+0.5
1,464,703	-		Synpcc7942_1412	0.74	-1.1
1,464,703	-		Synpcc7942_1412	0.74	-1.5
1,464,703	-		Synpcc7942_1412	0.74	-0.1
1,464,705	+		Synpcc7942_1412	0.75	-1.1
1,464,719	-		Synpcc7942_1412	0.78	-1.7
1,464,719	-		Synpcc7942_1412	0.78	-2.3
1,464,735	+		Synpcc7942_1412	0.82	-0.3
1,464,780	+				-0.4
1,464,813	+				+0.3
1,464,821	-				-2.4
1,464,831	-				-0.6
1,464,857	-				-4.2
1,464,857	-				-2.4
1,464,857	-				-0.7
1,464,871	+				+0.9
1,464,871	+				+0.2
1,464,879	-				+1.9
1,464,881	+				-0.9
1,464,905	-				-0.1
1,464,906	+				-2.7
1,464,907	+				+1.1
1,464,925	-				+0.1
1,465,007	+				+1.2
1,465,010	+				-0.5
1,465,027	-		Synpcc7942_1413	0.11	-1.7
1,465,035	+		Synpcc7942_1413	0.12	-0.6
1,465,035	+		Synpcc7942_1413	0.12	+2.2
1,465,043	-				+2.5
1,465,052	+		Synpcc7942_1413	0.15	-0.5
1,465,090	-		Synpcc7942_1413	0.20	-1.1
1,465,092	+		Synpcc7942_1413	0.20	+0.1
1,465,157	-		Synpcc7942_1413	0.29	-0.3
1,465,163	+		Synpcc7942_1413	0.29	+0.4
1,465,179	-		Synpcc7942_1413	0.31	-0.1
1,465,181	+		Synpcc7942_1413	0.32	+1.5
1,465,223	+		Synpcc7942_1413	0.37	+1.1
1,465,264	-		Synpcc7942_1413	0.43	-0.1
1,465,315	+		Synpcc7942_1413	0.49	-1.1
1,465,315	+				+2.2
1,465,315	+				+0.5
1,465,329	+		Synpcc7942_1413	0.51	+2.2
1,465,338	-		Synpcc7942_1413	0.53	+0.1
1,465,349	-		Synpcc7942_1413	0.54	+0.5
1,465,351	+		Synpcc7942_1413	0.54	+0.8