Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2885

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
3,236,314	+				+1.5
3,236,315	-				-0.7
3,236,331	-				-1.1
3,236,349	+				+0.9
3,236,349	+				+0.8
3,236,349	+				+2.3
3,236,349	+				+1.2
3,236,350	-				-0.1
3,236,350	-				-2.9
3,236,350	-				-2.1
3,236,350	-				-3.4
3,236,350	-				-1.6
3,236,354	+				+0.4
3,236,354	+				+0.9
3,236,354	+				+1.7
3,236,354	+				+1.4
3,236,354	+				+1.6
3,236,354	+				-1.1
3,236,355	-				-1.6
3,236,355	-				-1.6
3,236,355	-				-1.6
3,236,355	-				-0.1
3,236,355	-				+0.5
3,236,355	-				-1.6
3,236,385	-				-1.1
3,236,509	+				-1.6
3,236,509	+				-1.1
3,236,520	+				-0.1
3,236,529	+		Pf1N1B4_2884	0.12	-2.4
3,236,529	+		Pf1N1B4_2884	0.12	-2.1
3,236,530	-		Pf1N1B4_2884	0.12	-0.6
3,236,530	-		Pf1N1B4_2884	0.12	-3.6
3,236,632	+		Pf1N1B4_2884	0.29	-2.1
3,236,633	-		Pf1N1B4_2884	0.30	-0.1
3,236,806	-		Pf1N1B4_2884	0.59	-1.6
3,236,820	+		Pf1N1B4_2884	0.62	-2.4
3,236,820	+		Pf1N1B4_2884	0.62	-0.1
3,236,829	+		Pf1N1B4_2884	0.63	-2.1
3,236,829	+		Pf1N1B4_2884	0.63	-1.6
3,236,830	-		Pf1N1B4_2884	0.63	-2.4
3,236,839	+		Pf1N1B4_2884	0.65	-2.1
3,236,839	+		Pf1N1B4_2884	0.65	-0.9
3,236,839	+		Pf1N1B4_2884	0.65	-1.6
3,236,879	-		Pf1N1B4_2884	0.72	-2.6
3,236,923	+		Pf1N1B4_2884	0.79	-1.1
3,236,924	-		Pf1N1B4_2884	0.79	-0.1
3,236,924	-		Pf1N1B4_2884	0.79	+0.5
3,236,980	+		Pf1N1B4_2884	0.89	-1.1
3,236,980	+		Pf1N1B4_2884	0.89	-4.0
3,236,980	+		Pf1N1B4_2884	0.89	-1.1
3,236,980	+		Pf1N1B4_2884	0.89	-1.1
3,236,980	+		Pf1N1B4_2884	0.89	-1.6
3,236,981	-		Pf1N1B4_2884	0.89	-0.1
3,237,084	+				-1.6
3,237,168	+				-1.1
3,237,169	-		Pf1N1B4_2885	0.22	-4.3
3,237,169	-		Pf1N1B4_2885	0.22	-3.1
3,237,169	-		Pf1N1B4_2885	0.22	-4.8
3,237,182	+		Pf1N1B4_2885	0.24	-0.1
3,237,183	-		Pf1N1B4_2885	0.24	-2.9
3,237,202	+		Pf1N1B4_2885	0.27	-2.4
3,237,202	+		Pf1N1B4_2885	0.27	-2.1
3,237,202	+		Pf1N1B4_2885	0.27	-2.6
3,237,203	-		Pf1N1B4_2885	0.28	-1.6
3,237,203	-		Pf1N1B4_2885	0.28	-1.1
3,237,270	+		Pf1N1B4_2885	0.38	-1.1
3,237,270	+		Pf1N1B4_2885	0.38	-0.1
3,237,270	+		Pf1N1B4_2885	0.38	-3.6
3,237,270	+		Pf1N1B4_2885	0.38	-2.6
3,237,270	+		Pf1N1B4_2885	0.38	-2.1
3,237,270	+		Pf1N1B4_2885	0.38	-2.6
3,237,271	-		Pf1N1B4_2885	0.38	-2.9
3,237,436	+		Pf1N1B4_2885	0.65	-3.4
3,237,437	-		Pf1N1B4_2885	0.65	-0.1
3,237,478	-		Pf1N1B4_2885	0.72	-1.6
3,237,478	-		Pf1N1B4_2885	0.72	-1.6
3,237,486	-		Pf1N1B4_2885	0.73	-2.1
3,237,697	+				-2.1
3,237,697	+				-1.1
3,237,698	-				-3.2
3,237,698	-				-3.1
3,237,698	-				-2.4
3,237,698	-				-2.4
3,237,698	-				-1.6
3,237,698	-				-1.1
3,237,698	-				-1.1
3,237,756	-				-1.6
3,237,834	-				-2.6
3,237,938	+		Pf1N1B4_2886	0.13	-2.1
3,237,938	+		Pf1N1B4_2886	0.13	-0.1
3,237,938	+		Pf1N1B4_2886	0.13	-5.1
3,237,938	+		Pf1N1B4_2886	0.13	-0.1
3,237,938	+		Pf1N1B4_2886	0.13	-2.4
3,237,938	+		Pf1N1B4_2886	0.13	-2.6
3,237,938	+		Pf1N1B4_2886	0.13	-2.4
3,237,939	-		Pf1N1B4_2886	0.13	-2.4
3,237,939	-		Pf1N1B4_2886	0.13	-1.6
3,237,939	-		Pf1N1B4_2886	0.13	-2.4
3,237,995	-		Pf1N1B4_2886	0.15	-1.6
3,238,024	+		Pf1N1B4_2886	0.16	+1.3
3,238,028	+				-0.1
3,238,028	+		Pf1N1B4_2886	0.17	-0.5
3,238,028	+		Pf1N1B4_2886	0.17	+1.5
3,238,028	+		Pf1N1B4_2886	0.17	-2.4
3,238,028	+		Pf1N1B4_2886	0.17	-1.6
3,238,028	+		Pf1N1B4_2886	0.17	-1.1
3,238,028	+		Pf1N1B4_2886	0.17	-1.1
3,238,028	+		Pf1N1B4_2886	0.17	-2.1
3,238,028	+		Pf1N1B4_2886	0.17	-2.4
3,238,028	+		Pf1N1B4_2886	0.17	-1.1
3,238,028	+		Pf1N1B4_2886	0.17	-2.4
3,238,029	-		Pf1N1B4_2886	0.17	-3.4
3,238,029	-		Pf1N1B4_2886	0.17	-0.1
3,238,029	-		Pf1N1B4_2886	0.17	-2.6
3,238,029	-		Pf1N1B4_2886	0.17	-1.1
3,238,029	-		Pf1N1B4_2886	0.17	-0.1
3,238,029	-		Pf1N1B4_2886	0.17	-0.6
3,238,029	-		Pf1N1B4_2886	0.17	-0.1
3,238,029	-		Pf1N1B4_2886	0.17	-4.2
3,238,029	-		Pf1N1B4_2886	0.17	-2.1
3,238,029	-		Pf1N1B4_2886	0.17	-2.4
3,238,029	-		Pf1N1B4_2886	0.17	-1.1
3,238,029	-		Pf1N1B4_2886	0.17	-2.1
3,238,179	-		Pf1N1B4_2886	0.23	-2.6
3,238,179	-		Pf1N1B4_2886	0.23	-0.1
3,238,179	-		Pf1N1B4_2886	0.23	-2.4
3,238,179	-		Pf1N1B4_2886	0.23	-2.4
3,238,179	-		Pf1N1B4_2886	0.23	+0.5
3,238,211	+		Pf1N1B4_2886	0.24	-2.4
3,238,211	+		Pf1N1B4_2886	0.24	-0.1
3,238,211	+		Pf1N1B4_2886	0.24	+1.3
3,238,211	+		Pf1N1B4_2886	0.24	-2.6
3,238,211	+		Pf1N1B4_2886	0.24	-2.4
3,238,212	-		Pf1N1B4_2886	0.25	-2.4
3,238,212	-		Pf1N1B4_2886	0.25	-1.6
3,238,212	-		Pf1N1B4_2886	0.25	-2.9
3,238,212	-		Pf1N1B4_2886	0.25	-2.1
3,238,269	-		Pf1N1B4_2886	0.27	+0.9
3,238,269	-		Pf1N1B4_2886	0.27	-0.1
3,238,354	+		Pf1N1B4_2886	0.31	-1.1
3,238,354	+		Pf1N1B4_2886	0.31	-3.2
3,238,354	+		Pf1N1B4_2886	0.31	-4.3
3,238,457	+		Pf1N1B4_2886	0.35	-1.6
3,238,458	-		Pf1N1B4_2886	0.35	-2.9
3,238,550	+		Pf1N1B4_2886	0.39	-1.1
3,238,550	+		Pf1N1B4_2886	0.39	-1.6
3,238,551	-		Pf1N1B4_2886	0.39	-2.1
3,238,551	-		Pf1N1B4_2886	0.39	-1.1
3,238,551	-		Pf1N1B4_2886	0.39	-2.4
3,238,551	-		Pf1N1B4_2886	0.39	-3.2
3,238,649	+		Pf1N1B4_2886	0.43	-3.6
3,238,649	+		Pf1N1B4_2886	0.43	-0.1
3,238,649	+		Pf1N1B4_2886	0.43	+0.3
3,238,650	-		Pf1N1B4_2886	0.44	-2.1
3,238,650	-		Pf1N1B4_2886	0.44	-2.1
3,238,650	-		Pf1N1B4_2886	0.44	-0.1