Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2617

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
2,957,420	+				-1.7
2,957,420	+				-1.7
2,957,421	-				-1.0
2,957,675	+		Pf1N1B4_2616	0.18	-1.4
2,957,690	+		Pf1N1B4_2616	0.20	-0.1
2,957,690	+		Pf1N1B4_2616	0.20	-2.1
2,957,690	+		Pf1N1B4_2616	0.20	-1.7
2,957,690	+		Pf1N1B4_2616	0.20	+0.0
2,957,691	-		Pf1N1B4_2616	0.21	+2.2
2,957,691	-		Pf1N1B4_2616	0.21	-1.7
2,957,691	-		Pf1N1B4_2616	0.21	-2.4
2,957,712	+		Pf1N1B4_2616	0.23	-1.7
2,957,759	+		Pf1N1B4_2616	0.30	-1.4
2,957,759	+		Pf1N1B4_2616	0.30	-0.5
2,957,759	+		Pf1N1B4_2616	0.30	-0.1
2,957,759	+		Pf1N1B4_2616	0.30	-0.5
2,957,759	+		Pf1N1B4_2616	0.30	-1.0
2,957,759	+		Pf1N1B4_2616	0.30	+0.5
2,957,759	+		Pf1N1B4_2616	0.30	-0.1
2,957,760	-		Pf1N1B4_2616	0.30	+1.6
2,957,804	+		Pf1N1B4_2616	0.36	-1.9
2,957,804	+		Pf1N1B4_2616	0.36	-1.1
2,957,804	+		Pf1N1B4_2616	0.36	-0.9
2,957,805	-		Pf1N1B4_2616	0.36	-2.4
2,957,805	-				-0.1
2,957,805	-		Pf1N1B4_2616	0.36	+0.9
2,957,805	-		Pf1N1B4_2616	0.36	-1.7
2,957,805	-		Pf1N1B4_2616	0.36	-1.1
2,957,905	+		Pf1N1B4_2616	0.50	+0.5
2,957,906	-				-0.1
2,957,941	+		Pf1N1B4_2616	0.55	-1.7
2,958,057	-		Pf1N1B4_2616	0.71	+0.7
2,958,098	+		Pf1N1B4_2616	0.77	-0.1
2,958,098	+		Pf1N1B4_2616	0.77	-2.4
2,958,099	-		Pf1N1B4_2616	0.77	+0.1
2,958,164	+		Pf1N1B4_2616	0.86	-1.1
2,958,164	+		Pf1N1B4_2616	0.86	-1.1
2,958,164	+		Pf1N1B4_2616	0.86	-0.9
2,958,164	+		Pf1N1B4_2616	0.86	-1.8
2,958,165	-		Pf1N1B4_2616	0.86	+1.2
2,958,165	-		Pf1N1B4_2616	0.86	-0.7
2,958,165	-		Pf1N1B4_2616	0.86	+1.5
2,958,251	+				-0.4
2,958,251	+				-0.6
2,958,251	+				-2.1
2,958,251	+				+0.3
2,958,251	+				+0.9
2,958,251	+				-1.1
2,958,252	-				-0.1
2,958,252	-				-1.4
2,958,252	-				-1.7
2,958,252	-				-1.7
2,958,252	-				-0.1
2,958,252	-				-1.1
2,958,354	+		Pf1N1B4_2617	0.16	-0.9
2,958,354	+		Pf1N1B4_2617	0.16	+0.9
2,958,354	+		Pf1N1B4_2617	0.16	-2.1
2,958,354	+		Pf1N1B4_2617	0.16	-0.1
2,958,354	+		Pf1N1B4_2617	0.16	-1.1
2,958,354	+		Pf1N1B4_2617	0.16	-2.1
2,958,354	+		Pf1N1B4_2617	0.16	+1.1
2,958,354	+		Pf1N1B4_2617	0.16	+0.4
2,958,354	+				+1.2
2,958,354	+		Pf1N1B4_2617	0.16	-2.4
2,958,354	+		Pf1N1B4_2617	0.16	-1.7
2,958,355	-		Pf1N1B4_2617	0.16	-1.1
2,958,355	-		Pf1N1B4_2617	0.16	-1.7
2,958,355	-		Pf1N1B4_2617	0.16	-2.1
2,958,355	-		Pf1N1B4_2617	0.16	-3.1
2,958,355	-		Pf1N1B4_2617	0.16	-0.1
2,958,355	-		Pf1N1B4_2617	0.16	-1.7
2,958,355	-		Pf1N1B4_2617	0.16	-2.0
2,958,355	-		Pf1N1B4_2617	0.16	-2.1
2,958,355	-		Pf1N1B4_2617	0.16	-2.1
2,958,355	-		Pf1N1B4_2617	0.16	-2.4
2,958,382	+		Pf1N1B4_2617	0.22	-0.1
2,958,404	-		Pf1N1B4_2617	0.27	-1.8
2,958,440	+				+0.9
2,958,441	-				-0.1
2,958,492	+		Pf1N1B4_2617	0.48	-0.1
2,958,612	+		Pf1N1B4_2617	0.76	+0.0
2,958,612	+		Pf1N1B4_2617	0.76	-1.1
2,958,612	+		Pf1N1B4_2617	0.76	-0.5
2,958,612	+				-0.1
2,958,613	-		Pf1N1B4_2617	0.76	-0.1
2,958,657	+		Pf1N1B4_2617	0.86	-0.9
2,958,657	+		Pf1N1B4_2617	0.86	+0.6
2,958,657	+		Pf1N1B4_2617	0.86	-2.1
2,958,657	+		Pf1N1B4_2617	0.86	-0.1
2,958,657	+		Pf1N1B4_2617	0.86	-1.7
2,958,657	+		Pf1N1B4_2617	0.86	-2.7
2,958,658	-		Pf1N1B4_2617	0.86	-0.1
2,958,658	-		Pf1N1B4_2617	0.86	-2.1
2,958,658	-		Pf1N1B4_2617	0.86	+0.9
2,958,658	-		Pf1N1B4_2617	0.86	-1.7
2,958,658	-		Pf1N1B4_2617	0.86	-1.1
2,958,658	-		Pf1N1B4_2617	0.86	-3.4
2,958,728	+				-1.4
2,958,729	-				-2.7
2,958,729	-				-0.8
2,958,732	+				+0.5
2,958,733	-				-1.7
2,958,756	+				+0.9
2,958,756	+				-1.7
2,958,756	+				-2.6
2,958,756	+				-1.7
2,958,757	-				-1.7
2,958,864	+		Pf1N1B4_2618	0.20	-0.1
2,958,864	+		Pf1N1B4_2618	0.20	-2.9
2,958,864	+		Pf1N1B4_2618	0.20	-0.9
2,958,864	+		Pf1N1B4_2618	0.20	+0.0
2,958,864	+		Pf1N1B4_2618	0.20	+0.9
2,958,864	+		Pf1N1B4_2618	0.20	-0.3
2,958,891	+		Pf1N1B4_2618	0.24	+0.1
2,958,891	+		Pf1N1B4_2618	0.24	-2.1
2,958,891	+		Pf1N1B4_2618	0.24	-0.1
2,958,892	-		Pf1N1B4_2618	0.24	-1.1
2,958,972	+		Pf1N1B4_2618	0.36	-1.8
2,958,972	+		Pf1N1B4_2618	0.36	+2.3
2,958,973	-		Pf1N1B4_2618	0.36	-1.3
2,958,973	-				-1.7
2,958,993	+				-1.7
2,958,993	+		Pf1N1B4_2618	0.39	-0.1
2,958,993	+		Pf1N1B4_2618	0.39	-0.1
2,958,994	-		Pf1N1B4_2618	0.39	+0.3
2,959,065	+		Pf1N1B4_2618	0.49	-2.1
2,959,065	+		Pf1N1B4_2618	0.49	-2.4
2,959,065	+		Pf1N1B4_2618	0.49	-0.7
2,959,065	+		Pf1N1B4_2618	0.49	+0.9
2,959,065	+		Pf1N1B4_2618	0.49	-0.1
2,959,065	+				-1.7
2,959,065	+		Pf1N1B4_2618	0.49	-0.5
2,959,065	+		Pf1N1B4_2618	0.49	-0.2
2,959,065	+		Pf1N1B4_2618	0.49	+2.2
2,959,066	-		Pf1N1B4_2618	0.50	+1.3
2,959,066	-		Pf1N1B4_2618	0.50	+0.4
2,959,066	-		Pf1N1B4_2618	0.50	+1.5
2,959,158	+		Pf1N1B4_2618	0.63	-0.6
2,959,158	+		Pf1N1B4_2618	0.63	-0.6
2,959,158	+		Pf1N1B4_2618	0.63	-1.1
2,959,159	-		Pf1N1B4_2618	0.63	-1.7
2,959,159	-		Pf1N1B4_2618	0.63	-1.7
2,959,161	+		Pf1N1B4_2618	0.64	-1.7
2,959,161	+		Pf1N1B4_2618	0.64	-1.1
2,959,161	+		Pf1N1B4_2618	0.64	-3.7
2,959,394	-				+0.4
2,959,438	+				+0.9
2,959,438	+				+1.0
2,959,438	+				-0.1
2,959,439	-				-2.1
2,959,439	-				-0.4
2,959,439	-				-0.3
2,959,603	+		Pf1N1B4_2619	0.20	-2.1
2,959,677	+		Pf1N1B4_2619	0.28	+1.0
2,959,677	+		Pf1N1B4_2619	0.28	+0.8