Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2227

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
2,538,229	+		Pf1N1B4_2225	0.62	+0.4
2,538,229	+		Pf1N1B4_2225	0.62	+0.6
2,538,229	+		Pf1N1B4_2225	0.62	-0.2
2,538,229	+		Pf1N1B4_2225	0.62	-0.7
2,538,229	+		Pf1N1B4_2225	0.62	-2.1
2,538,229	+		Pf1N1B4_2225	0.62	-0.6
2,538,229	+		Pf1N1B4_2225	0.62	-1.7
2,538,229	+		Pf1N1B4_2225	0.62	+0.4
2,538,229	+		Pf1N1B4_2225	0.62	-1.6
2,538,229	+		Pf1N1B4_2225	0.62	-0.1
2,538,229	+		Pf1N1B4_2225	0.62	+0.6
2,538,229	+		Pf1N1B4_2225	0.62	-0.7
2,538,229	+		Pf1N1B4_2225	0.62	-0.7
2,538,229	+		Pf1N1B4_2225	0.62	+0.9
2,538,229	+		Pf1N1B4_2225	0.62	-0.8
2,538,229	+		Pf1N1B4_2225	0.62	-0.6
2,538,230	-		Pf1N1B4_2225	0.62	+0.1
2,538,230	-		Pf1N1B4_2225	0.62	-1.1
2,538,230	-		Pf1N1B4_2225	0.62	-0.1
2,538,230	-				-1.7
2,538,230	-		Pf1N1B4_2225	0.62	-1.0
2,538,230	-		Pf1N1B4_2225	0.62	-0.9
2,538,230	-		Pf1N1B4_2225	0.62	+1.1
2,538,230	-		Pf1N1B4_2225	0.62	-1.0
2,538,230	-		Pf1N1B4_2225	0.62	-1.5
2,538,230	-		Pf1N1B4_2225	0.62	+1.1
2,538,230	-		Pf1N1B4_2225	0.62	+0.1
2,538,230	-		Pf1N1B4_2225	0.62	+1.5
2,538,230	-		Pf1N1B4_2225	0.62	-2.1
2,538,230	-		Pf1N1B4_2225	0.62	-0.1
2,538,230	-		Pf1N1B4_2225	0.62	+0.9
2,538,230	-		Pf1N1B4_2225	0.62	-0.6
2,538,230	-		Pf1N1B4_2225	0.62	-1.7
2,538,230	-		Pf1N1B4_2225	0.62	+0.6
2,538,230	-		Pf1N1B4_2225	0.62	+0.9
2,538,230	-		Pf1N1B4_2225	0.62	-1.3
2,538,230	-		Pf1N1B4_2225	0.62	-1.4
2,538,230	-		Pf1N1B4_2225	0.62	+0.1
2,538,230	-		Pf1N1B4_2225	0.62	-2.1
2,538,230	-				-0.7
2,538,230	-		Pf1N1B4_2225	0.62	-1.7
2,538,230	-		Pf1N1B4_2225	0.62	-0.9
2,538,233	+		Pf1N1B4_2225	0.62	-0.1
2,538,233	+		Pf1N1B4_2225	0.62	+1.2
2,538,233	+		Pf1N1B4_2225	0.62	-1.1
2,538,233	+		Pf1N1B4_2225	0.62	-1.4
2,538,233	+		Pf1N1B4_2225	0.62	+1.0
2,538,233	+		Pf1N1B4_2225	0.62	+0.3
2,538,233	+		Pf1N1B4_2225	0.62	-3.3
2,538,233	+		Pf1N1B4_2225	0.62	-1.1
2,538,234	-		Pf1N1B4_2225	0.62	+0.1
2,538,234	-		Pf1N1B4_2225	0.62	+0.2
2,538,234	-		Pf1N1B4_2225	0.62	-0.9
2,538,234	-		Pf1N1B4_2225	0.62	+0.3
2,538,234	-		Pf1N1B4_2225	0.62	+0.6
2,538,234	-		Pf1N1B4_2225	0.62	-0.7
2,538,234	-		Pf1N1B4_2225	0.62	+0.9
2,538,301	+		Pf1N1B4_2225	0.73	-0.3
2,538,301	+		Pf1N1B4_2225	0.73	-0.3
2,538,301	+		Pf1N1B4_2225	0.73	+1.9
2,538,302	-		Pf1N1B4_2225	0.74	+0.9
2,538,302	-		Pf1N1B4_2225	0.74	+1.0
2,538,302	-		Pf1N1B4_2225	0.74	-1.7
2,538,302	-		Pf1N1B4_2225	0.74	-0.1
2,538,353	+		Pf1N1B4_2225	0.82	-0.6
2,538,353	+		Pf1N1B4_2225	0.82	-1.1
2,538,353	+		Pf1N1B4_2225	0.82	+2.2
2,538,353	+		Pf1N1B4_2225	0.82	+1.2
2,538,354	-		Pf1N1B4_2225	0.82	+3.1
2,538,354	-		Pf1N1B4_2225	0.82	-1.4
2,538,354	-		Pf1N1B4_2225	0.82	-1.7
2,538,354	-		Pf1N1B4_2225	0.82	+1.2
2,538,354	-		Pf1N1B4_2225	0.82	-0.7
2,538,355	+		Pf1N1B4_2225	0.82	-0.5
2,538,355	+		Pf1N1B4_2225	0.82	-0.5
2,538,355	+		Pf1N1B4_2225	0.82	-0.4
2,538,355	+		Pf1N1B4_2225	0.82	+1.2
2,538,355	+		Pf1N1B4_2225	0.82	-0.5
2,538,355	+		Pf1N1B4_2225	0.82	-1.7
2,538,355	+		Pf1N1B4_2225	0.82	-0.9
2,538,355	+		Pf1N1B4_2225	0.82	-1.3
2,538,355	+		Pf1N1B4_2225	0.82	+0.1
2,538,355	+		Pf1N1B4_2225	0.82	-1.8
2,538,356	-		Pf1N1B4_2225	0.83	-0.1
2,538,356	-		Pf1N1B4_2225	0.83	-0.8
2,538,356	-		Pf1N1B4_2225	0.83	-2.7
2,538,356	-		Pf1N1B4_2225	0.83	-0.7
2,538,356	-		Pf1N1B4_2225	0.83	-1.4
2,538,356	-		Pf1N1B4_2225	0.83	+1.5
2,538,356	-		Pf1N1B4_2225	0.83	-2.7
2,538,487	-				-1.7
2,538,524	+				-1.1
2,538,524	+				+1.7
2,538,524	+				-0.7
2,538,525	-				+0.2
2,538,525	-				-0.1
2,538,545	+				-0.5
2,538,545	+				+1.4
2,538,545	+				-0.1
2,538,545	+				+0.0
2,538,545	+				+1.9
2,538,545	+				+1.2
2,538,546	-				-1.1
2,538,546	-				+0.0
2,538,575	+				+0.1
2,538,576	-				-2.4
2,538,613	+				+1.2
2,538,613	+				+0.4
2,538,614	-				+3.2
2,538,614	-				-0.1
2,538,635	-				+0.2
2,538,733	+				-1.4
2,538,733	+				+0.1
2,538,733	+				+1.5
2,538,734	-				+1.3
2,538,734	-				+0.7
2,538,734	-				-0.6
2,538,734	-				-1.1
2,538,734	-				+1.1
2,538,734	-				+1.7
2,538,734	-				-0.1
2,538,735	+				+0.1
2,538,735	+				+0.9
2,538,736	-				+0.9
2,539,188	-		Pf1N1B4_2227	0.56	-2.4
2,539,188	-				-0.1
2,539,191	-		Pf1N1B4_2227	0.58	-0.1
2,539,191	-		Pf1N1B4_2227	0.58	-2.4
2,539,191	-		Pf1N1B4_2227	0.58	-2.4
2,539,191	-		Pf1N1B4_2227	0.58	-0.1
2,539,212	-		Pf1N1B4_2227	0.68	-0.9
2,539,212	-		Pf1N1B4_2227	0.68	-1.1
2,539,310	-				-2.1
2,539,310	-				-0.7
2,539,310	-				-1.1
2,539,310	-				-1.7
2,539,310	-				-0.1
2,539,310	-				-1.4
2,539,310	-				-0.9
2,539,328	-				-2.4
2,539,328	-				+0.4
2,539,328	-				-2.4
2,539,328	-				-2.1
2,539,331	-				-1.7
2,539,331	-				+0.1
2,539,331	-				-0.7
2,539,331	-				+0.7
2,539,331	-				+2.7
2,539,331	-				-2.1
2,539,353	+				-0.1
2,539,354	-				-0.1
2,539,354	-				+1.0
2,539,354	-				-0.1
2,539,354	-				+0.4
2,539,354	-				+0.5
2,539,354	-				+0.5
2,539,354	-				+0.5
2,539,359	-				+2.7
2,539,359	-				-2.9
2,539,359	-				+1.3
2,539,359	-				-0.0
2,539,359	-				-1.1
2,539,359	-				+1.0
2,539,359	-				+0.6
2,539,359	-				-0.1
2,539,359	-				+0.1
2,539,359	-				-1.3
2,539,375	-				-0.1
2,539,375	-				-0.5
2,539,375	-				+2.2
2,539,375	-				+1.1
2,539,375	-				-2.3
2,539,381	-				-1.3
2,539,381	-				+2.5
2,539,381	-				+1.1
2,539,398	-				+0.1
2,539,398	-				-0.1
2,539,636	+		Pf1N1B4_2228	0.41	+1.3
2,539,637	-		Pf1N1B4_2228	0.42	-0.6
2,539,637	-		Pf1N1B4_2228	0.42	-3.3
2,539,763	+		Pf1N1B4_2228	0.64	-0.8
2,539,784	-		Pf1N1B4_2228	0.68	+0.8
2,539,862	+				-0.1
2,539,863	-		Pf1N1B4_2228	0.82	-0.1
2,539,863	-		Pf1N1B4_2228	0.82	-1.1
2,539,863	-		Pf1N1B4_2228	0.82	+2.2
2,539,880	+		Pf1N1B4_2228	0.85	-1.1
2,539,880	+		Pf1N1B4_2228	0.85	-1.7
2,539,881	-		Pf1N1B4_2228	0.86	+1.3
2,539,881	-		Pf1N1B4_2228	0.86	+1.1
2,539,881	-		Pf1N1B4_2228	0.86	+0.9
2,539,881	-		Pf1N1B4_2228	0.86	+2.2
2,539,958	+				+0.0
2,539,996	+				-2.1
2,540,012	+				+0.9
2,540,012	+				-0.4
2,540,141	+		Pf1N1B4_2229	0.11	+1.2
2,540,141	+		Pf1N1B4_2229	0.11	-0.5
2,540,142	-		Pf1N1B4_2229	0.12	-0.5
2,540,207	+		Pf1N1B4_2229	0.16	+1.2
2,540,207	+		Pf1N1B4_2229	0.16	+2.6
2,540,207	+		Pf1N1B4_2229	0.16	+0.4
2,540,207	+		Pf1N1B4_2229	0.16	+0.8
2,540,208	-		Pf1N1B4_2229	0.16	-0.4
2,540,208	-		Pf1N1B4_2229	0.16	+0.9
2,540,231	-		Pf1N1B4_2229	0.18	-0.7