Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1545

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
1,781,706	+		Pf1N1B4_1544	0.71	-2.6
1,781,721	+		Pf1N1B4_1544	0.72	-2.0
1,781,762	-				-2.0
1,781,762	-		Pf1N1B4_1544	0.74	-2.0
1,781,934	+		Pf1N1B4_1544	0.81	-3.0
1,781,934	+		Pf1N1B4_1544	0.81	-2.8
1,781,934	+		Pf1N1B4_1544	0.81	-4.3
1,781,934	+		Pf1N1B4_1544	0.81	-2.3
1,781,934	+		Pf1N1B4_1544	0.81	-1.6
1,781,934	+		Pf1N1B4_1544	0.81	-2.0
1,781,934	+		Pf1N1B4_1544	0.81	-1.0
1,781,934	+		Pf1N1B4_1544	0.81	-0.0
1,781,934	+		Pf1N1B4_1544	0.81	+0.8
1,781,935	-		Pf1N1B4_1544	0.81	-1.0
1,781,935	-		Pf1N1B4_1544	0.81	-2.0
1,781,935	-		Pf1N1B4_1544	0.81	-1.0
1,781,935	-				-1.0
1,781,935	-		Pf1N1B4_1544	0.81	-2.8
1,781,935	-		Pf1N1B4_1544	0.81	-1.0
1,781,935	-		Pf1N1B4_1544	0.81	-3.2
1,781,935	-		Pf1N1B4_1544	0.81	-3.7
1,781,935	-		Pf1N1B4_1544	0.81	+0.3
1,781,935	-		Pf1N1B4_1544	0.81	-1.6
1,781,935	-		Pf1N1B4_1544	0.81	-2.3
1,782,066	+		Pf1N1B4_1544	0.86	-1.0
1,782,079	-		Pf1N1B4_1544	0.87	+1.3
1,782,079	-		Pf1N1B4_1544	0.87	-0.0
1,782,171	+				-1.0
1,782,171	+				-1.0
1,782,172	-				-1.0
1,782,172	-				-1.6
1,782,172	-				-0.0
1,782,172	-				+0.5
1,782,291	+				+0.0
1,782,413	+				-2.6
1,782,413	+				-0.6
1,782,413	+				+0.3
1,782,413	+				-2.8
1,782,413	+				+0.7
1,782,414	-				-0.6
1,782,419	+				+0.8
1,782,419	+				+0.0
1,782,420	-				+0.7
1,782,420	-				-1.4
1,782,423	+				+1.3
1,782,423	+				+1.7
1,782,423	+				+0.0
1,782,424	-				+0.0
1,782,424	-				-0.3
1,782,424	-				-0.4
1,782,424	-				+0.2
1,782,593	+				-1.6
1,782,594	-				+1.0
1,782,696	+				-2.0
1,782,697	-				-1.7
1,782,697	-				-3.5
1,782,697	-				-3.3
1,782,804	+		Pf1N1B4_1545	0.11	-1.0
1,782,804	+		Pf1N1B4_1545	0.11	-2.8
1,782,804	+		Pf1N1B4_1545	0.11	-1.6
1,782,804	+		Pf1N1B4_1545	0.11	-3.3
1,782,804	+		Pf1N1B4_1545	0.11	-1.6
1,782,804	+		Pf1N1B4_1545	0.11	-1.7
1,782,804	+		Pf1N1B4_1545	0.11	+0.0
1,782,805	-		Pf1N1B4_1545	0.12	-0.6
1,782,805	-		Pf1N1B4_1545	0.12	-1.6
1,782,805	-		Pf1N1B4_1545	0.12	-2.3
1,782,805	-		Pf1N1B4_1545	0.12	-3.9
1,782,805	-		Pf1N1B4_1545	0.12	-2.3
1,782,805	-		Pf1N1B4_1545	0.12	-2.0
1,782,805	-		Pf1N1B4_1545	0.12	-3.2
1,782,805	-		Pf1N1B4_1545	0.12	-1.6
1,782,837	+		Pf1N1B4_1545	0.14	-1.0
1,782,974	+		Pf1N1B4_1545	0.25	+0.0
1,782,974	+		Pf1N1B4_1545	0.25	-1.0
1,782,974	+		Pf1N1B4_1545	0.25	-2.0
1,782,975	-		Pf1N1B4_1545	0.25	-1.6
1,782,975	-		Pf1N1B4_1545	0.25	+0.4
1,782,975	-		Pf1N1B4_1545	0.25	-3.9
1,783,227	+		Pf1N1B4_1545	0.45	+0.0
1,783,228	-		Pf1N1B4_1545	0.45	-1.6
1,783,228	-		Pf1N1B4_1545	0.45	+0.0
1,783,228	-		Pf1N1B4_1545	0.45	-1.0
1,783,281	+		Pf1N1B4_1545	0.49	-2.0
1,783,281	+		Pf1N1B4_1545	0.49	-1.3
1,783,281	+		Pf1N1B4_1545	0.49	-3.3
1,783,281	+		Pf1N1B4_1545	0.49	-2.8
1,783,281	+		Pf1N1B4_1545	0.49	-3.0
1,783,281	+				-1.0
1,783,281	+		Pf1N1B4_1545	0.49	+0.0
1,783,281	+		Pf1N1B4_1545	0.49	-2.0
1,783,282	-		Pf1N1B4_1545	0.49	-3.0
1,783,282	-		Pf1N1B4_1545	0.49	-2.0
1,783,282	-		Pf1N1B4_1545	0.49	-2.0
1,783,282	-		Pf1N1B4_1545	0.49	-3.0
1,783,282	-		Pf1N1B4_1545	0.49	-1.6
1,783,282	-		Pf1N1B4_1545	0.49	-1.6
1,783,282	-		Pf1N1B4_1545	0.49	-3.0
1,783,282	-		Pf1N1B4_1545	0.49	-1.0
1,783,282	-		Pf1N1B4_1545	0.49	-1.3
1,783,282	-		Pf1N1B4_1545	0.49	-1.0
1,783,282	-		Pf1N1B4_1545	0.49	-0.6
1,783,282	-		Pf1N1B4_1545	0.49	-2.0
1,783,282	-		Pf1N1B4_1545	0.49	-2.3
1,783,282	-		Pf1N1B4_1545	0.49	-2.0
1,783,282	-		Pf1N1B4_1545	0.49	-2.0
1,783,282	-		Pf1N1B4_1545	0.49	-1.0
1,783,546	+		Pf1N1B4_1545	0.70	-1.0
1,783,547	-		Pf1N1B4_1545	0.70	-0.6
1,783,547	-		Pf1N1B4_1545	0.70	-1.0
1,783,555	+		Pf1N1B4_1545	0.71	-2.3
1,783,555	+		Pf1N1B4_1545	0.71	-2.6
1,783,556	-		Pf1N1B4_1545	0.71	-2.1
1,783,556	-		Pf1N1B4_1545	0.71	+1.1
1,783,556	-		Pf1N1B4_1545	0.71	-2.8
1,783,556	-		Pf1N1B4_1545	0.71	-1.0
1,783,651	+		Pf1N1B4_1545	0.78	-1.0
1,783,651	+		Pf1N1B4_1545	0.78	-3.0
1,783,652	-		Pf1N1B4_1545	0.78	-0.4
1,783,652	-		Pf1N1B4_1545	0.78	-2.3
1,783,652	-		Pf1N1B4_1545	0.78	+0.6
1,783,661	-		Pf1N1B4_1545	0.79	-3.3
1,783,661	-		Pf1N1B4_1545	0.79	-1.0
1,783,752	+		Pf1N1B4_1545	0.86	+0.0
1,783,752	+		Pf1N1B4_1545	0.86	-2.0
1,783,753	-		Pf1N1B4_1545	0.86	-2.0
1,783,753	-		Pf1N1B4_1545	0.86	-1.8
1,783,753	-		Pf1N1B4_1545	0.86	-1.6
1,783,753	-		Pf1N1B4_1545	0.86	-1.6
1,783,753	-		Pf1N1B4_1545	0.86	-1.6
1,783,753	-		Pf1N1B4_1545	0.86	-1.6
1,783,753	-		Pf1N1B4_1545	0.86	-1.0
1,783,753	-		Pf1N1B4_1545	0.86	-2.6
1,783,753	-		Pf1N1B4_1545	0.86	-2.6
1,783,758	+		Pf1N1B4_1545	0.87	-2.8
1,783,758	+		Pf1N1B4_1545	0.87	-2.3
1,783,791	-		Pf1N1B4_1545	0.89	-1.6
1,783,813	+				-3.5
1,783,815	+				-2.3
1,783,815	+				-2.0
1,783,815	+				-3.2
1,783,816	-				-2.3
1,783,816	-				-0.6
1,783,816	-				-1.6
1,783,816	-				-1.0
1,783,927	+				-0.0
1,783,927	+				-0.0
1,783,927	+				-1.6
1,783,927	+				-2.3
1,783,928	-				-2.0
1,783,928	-				-2.3
1,783,928	-				-1.6
1,783,928	-				-1.6
1,783,945	+				-0.0
1,783,946	-				-0.0
1,783,946	-				+2.3
1,783,973	+				-2.3
1,783,973	+				-3.7
1,783,974	-				-2.0
1,784,294	+		Pf1N1B4_1546	0.23	-1.6
1,784,294	+		Pf1N1B4_1546	0.23	-2.0
1,784,295	-		Pf1N1B4_1546	0.23	-1.3
1,784,562	+		Pf1N1B4_1546	0.56	-1.0
1,784,562	+		Pf1N1B4_1546	0.56	-1.0
1,784,562	+		Pf1N1B4_1546	0.56	+1.6
1,784,562	+		Pf1N1B4_1546	0.56	-0.1
1,784,562	+		Pf1N1B4_1546	0.56	-1.0
1,784,562	+		Pf1N1B4_1546	0.56	-0.0
1,784,562	+		Pf1N1B4_1546	0.56	+0.5
1,784,563	-		Pf1N1B4_1546	0.56	+1.0
1,784,563	-		Pf1N1B4_1546	0.56	-2.1
1,784,563	-		Pf1N1B4_1546	0.56	-0.3
1,784,563	-		Pf1N1B4_1546	0.56	-0.4
1,784,563	-		Pf1N1B4_1546	0.56	+0.3
1,784,563	-		Pf1N1B4_1546	0.56	-0.6
1,784,719	+		Pf1N1B4_1546	0.76	-1.8