Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1136

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
1,272,556	-		Pf1N1B4_1134	0.64	+0.1
1,272,667	+		Pf1N1B4_1134	0.73	+1.5
1,272,706	+		Pf1N1B4_1134	0.77	+1.3
1,272,754	+		Pf1N1B4_1134	0.81	-2.7
1,272,755	-		Pf1N1B4_1134	0.81	+0.1
1,272,755	-		Pf1N1B4_1134	0.81	+0.9
1,272,784	+		Pf1N1B4_1134	0.83	+1.5
1,272,784	+		Pf1N1B4_1134	0.83	+2.2
1,272,797	+		Pf1N1B4_1134	0.85	+0.8
1,272,797	+		Pf1N1B4_1134	0.85	-1.1
1,272,797	+		Pf1N1B4_1134	0.85	-2.1
1,272,797	+		Pf1N1B4_1134	0.85	+0.2
1,272,797	+		Pf1N1B4_1134	0.85	+0.5
1,272,797	+		Pf1N1B4_1134	0.85	+1.4
1,272,797	+		Pf1N1B4_1134	0.85	+1.1
1,272,797	+		Pf1N1B4_1134	0.85	-2.7
1,272,797	+		Pf1N1B4_1134	0.85	+1.2
1,272,797	+		Pf1N1B4_1134	0.85	-0.1
1,272,797	+		Pf1N1B4_1134	0.85	-1.1
1,272,798	-		Pf1N1B4_1134	0.85	+1.9
1,272,798	-		Pf1N1B4_1134	0.85	-0.7
1,272,798	-		Pf1N1B4_1134	0.85	-1.1
1,272,798	-		Pf1N1B4_1134	0.85	+0.2
1,272,798	-		Pf1N1B4_1134	0.85	-1.7
1,272,798	-		Pf1N1B4_1134	0.85	+1.3
1,272,798	-		Pf1N1B4_1134	0.85	-0.7
1,272,801	+		Pf1N1B4_1134	0.85	+0.6
1,272,801	+		Pf1N1B4_1134	0.85	-0.1
1,272,801	+		Pf1N1B4_1134	0.85	+0.2
1,272,801	+		Pf1N1B4_1134	0.85	+0.8
1,272,801	+		Pf1N1B4_1134	0.85	-0.4
1,272,802	-		Pf1N1B4_1134	0.85	-1.1
1,272,820	+		Pf1N1B4_1134	0.87	+1.5
1,272,820	+		Pf1N1B4_1134	0.87	+0.3
1,272,820	+		Pf1N1B4_1134	0.87	-0.4
1,272,820	+		Pf1N1B4_1134	0.87	+0.5
1,272,821	-		Pf1N1B4_1134	0.87	+0.6
1,272,821	-		Pf1N1B4_1134	0.87	-0.1
1,272,904	+				+1.1
1,273,021	-				-0.8
1,273,021	-				+0.5
1,273,036	-				-0.0
1,273,111	-				-0.5
1,273,120	-				-1.1
1,273,151	+				-2.0
1,273,152	-				-0.9
1,273,152	-				-0.3
1,273,152	-				+1.9
1,273,152	-				-1.7
1,273,152	-				-0.1
1,273,152	-				+0.9
1,273,159	+				-1.7
1,273,159	+				-1.3
1,273,159	+				+1.2
1,273,159	+				-1.1
1,273,160	-				-0.7
1,273,160	-				+0.8
1,273,160	-				-1.1
1,273,283	-		Pf1N1B4_1135	0.84	+0.9
1,273,283	-		Pf1N1B4_1135	0.84	-1.1
1,273,283	-		Pf1N1B4_1135	0.84	-1.7
1,273,283	-		Pf1N1B4_1135	0.84	-2.3
1,273,283	-		Pf1N1B4_1135	0.84	+0.2
1,273,362	+				+0.9
1,273,362	+				-0.2
1,273,412	-				+0.1
1,273,464	-				-0.1
1,273,599	-		Pf1N1B4_1136	0.13	-0.5
1,273,599	-		Pf1N1B4_1136	0.13	+1.1
1,273,599	-		Pf1N1B4_1136	0.13	-0.6
1,273,599	-		Pf1N1B4_1136	0.13	-1.7
1,273,601	+		Pf1N1B4_1136	0.14	-0.7
1,273,602	-		Pf1N1B4_1136	0.14	+0.9
1,273,682	+		Pf1N1B4_1136	0.21	+1.2
1,273,683	-		Pf1N1B4_1136	0.21	+0.3
1,273,770	-		Pf1N1B4_1136	0.28	-2.3
1,273,776	-		Pf1N1B4_1136	0.29	-0.1
1,273,796	+		Pf1N1B4_1136	0.30	+0.4
1,273,796	+		Pf1N1B4_1136	0.30	-0.8
1,273,797	-		Pf1N1B4_1136	0.30	-1.1
1,273,859	+		Pf1N1B4_1136	0.36	-1.1
1,273,860	-				-1.7
1,274,135	+				-1.7
1,274,135	+		Pf1N1B4_1136	0.60	+1.2
1,274,135	+		Pf1N1B4_1136	0.60	-2.0
1,274,135	+		Pf1N1B4_1136	0.60	+0.4
1,274,135	+		Pf1N1B4_1136	0.60	-1.7
1,274,135	+		Pf1N1B4_1136	0.60	+0.9
1,274,136	-		Pf1N1B4_1136	0.60	-0.1
1,274,136	-		Pf1N1B4_1136	0.60	-2.1
1,274,136	-		Pf1N1B4_1136	0.60	-2.1
1,274,136	-		Pf1N1B4_1136	0.60	+1.2
1,274,136	-		Pf1N1B4_1136	0.60	+0.2
1,274,136	-		Pf1N1B4_1136	0.60	-1.1
1,274,136	-		Pf1N1B4_1136	0.60	+0.1
1,274,165	+		Pf1N1B4_1136	0.62	-2.7
1,274,166	-		Pf1N1B4_1136	0.62	+0.2
1,274,280	+		Pf1N1B4_1136	0.72	+0.3
1,274,280	+		Pf1N1B4_1136	0.72	-1.7
1,274,281	-		Pf1N1B4_1136	0.72	+0.1
1,274,327	+		Pf1N1B4_1136	0.76	-1.7
1,274,327	+		Pf1N1B4_1136	0.76	-1.1
1,274,327	+		Pf1N1B4_1136	0.76	+0.9
1,274,328	-		Pf1N1B4_1136	0.76	-1.7
1,274,465	+		Pf1N1B4_1136	0.88	+1.2
1,274,465	+		Pf1N1B4_1136	0.88	-0.5
1,274,465	+		Pf1N1B4_1136	0.88	+0.2
1,274,466	-		Pf1N1B4_1136	0.88	-1.4
1,274,475	-		Pf1N1B4_1136	0.89	+0.9
1,274,480	+		Pf1N1B4_1136	0.89	-0.6
1,274,480	+		Pf1N1B4_1136	0.89	-1.7
1,274,481	-		Pf1N1B4_1136	0.89	-2.1
1,274,481	-		Pf1N1B4_1136	0.89	-0.9
1,274,481	-		Pf1N1B4_1136	0.89	-0.5
1,274,481	-		Pf1N1B4_1136	0.89	+0.9
1,274,519	+				-0.2
1,274,519	+				+0.5
1,274,520	-				-2.7
1,274,520	-				-0.1
1,274,520	-				-1.1
1,274,540	+				-0.3
1,274,540	+				-0.5
1,274,540	+				-0.1
1,274,541	-				-1.4
1,274,541	-				-1.1
1,274,541	-				-0.1
1,274,552	+				-0.1
1,274,597	+				+1.7
1,274,598	-				+0.9
1,274,603	+				-1.1
1,274,603	+				-0.1
1,274,604	-				+0.3
1,274,604	-				-1.9
1,274,742	+		Pf1N1B4_1137	0.12	-0.8
1,274,743	-		Pf1N1B4_1137	0.13	-0.4
1,274,810	-		Pf1N1B4_1137	0.22	-1.7
1,274,810	-		Pf1N1B4_1137	0.22	+0.4
1,274,810	-		Pf1N1B4_1137	0.22	+0.7
1,274,810	-		Pf1N1B4_1137	0.22	-2.7
1,274,811	+		Pf1N1B4_1137	0.22	-0.5
1,274,811	+		Pf1N1B4_1137	0.22	-0.3
1,274,811	+		Pf1N1B4_1137	0.22	-1.7
1,274,811	+		Pf1N1B4_1137	0.22	+0.7
1,274,812	-		Pf1N1B4_1137	0.23	+0.7
1,274,812	-		Pf1N1B4_1137	0.23	-0.7
1,274,812	-		Pf1N1B4_1137	0.23	-1.7
1,274,812	-		Pf1N1B4_1137	0.23	-0.7
1,274,812	-		Pf1N1B4_1137	0.23	+0.1
1,274,812	-		Pf1N1B4_1137	0.23	-0.6
1,274,812	-		Pf1N1B4_1137	0.23	-0.1
1,274,812	-		Pf1N1B4_1137	0.23	+0.8
1,274,812	-		Pf1N1B4_1137	0.23	+0.2
1,274,812	-		Pf1N1B4_1137	0.23	+2.2
1,274,812	-		Pf1N1B4_1137	0.23	+0.9
1,274,812	-		Pf1N1B4_1137	0.23	-3.1
1,274,812	-		Pf1N1B4_1137	0.23	-0.9
1,274,812	-		Pf1N1B4_1137	0.23	+0.5
1,274,812	-		Pf1N1B4_1137	0.23	-0.1
1,274,812	-				-1.1
1,274,928	+		Pf1N1B4_1137	0.39	-0.1
1,274,929	-		Pf1N1B4_1137	0.40	-2.2
1,274,946	+		Pf1N1B4_1137	0.42	-1.1
1,274,946	+		Pf1N1B4_1137	0.42	+1.5
1,274,985	+		Pf1N1B4_1137	0.48	-1.7
1,274,985	+		Pf1N1B4_1137	0.48	-0.8
1,274,986	-		Pf1N1B4_1137	0.48	-0.9
1,275,017	+		Pf1N1B4_1137	0.52	-0.5
1,275,017	+		Pf1N1B4_1137	0.52	+2.0
1,275,018	-		Pf1N1B4_1137	0.53	+0.3
1,275,018	-		Pf1N1B4_1137	0.53	-0.1
1,275,018	-		Pf1N1B4_1137	0.53	+1.4
1,275,018	-		Pf1N1B4_1137	0.53	+0.5
1,275,228	-		Pf1N1B4_1137	0.83	-2.4
1,275,343	+				+1.5
1,275,343	+				+0.5
1,275,343	+				-2.3
1,275,343	+				+1.1
1,275,343	+				-3.1
1,275,343	+				-2.6
1,275,344	-				-0.1
1,275,344	-				-1.1
1,275,344	-				+1.2
1,275,344	-				+0.3
1,275,344	-				-1.7
1,275,344	-				-0.1
1,275,344	-				+0.9
1,275,344	-				+0.9
1,275,344	-				-0.1
1,275,346	+				-0.1
1,275,346	+				+0.9
1,275,346	+				+0.1
1,275,347	-				-0.1
1,275,347	-				-1.1
1,275,347	-				+2.5
1,275,347	-				+1.5
1,275,347	-				-1.1
1,275,393	-				-0.2
1,275,495	-				+1.7
1,275,507	+				-0.9
1,275,508	-				-0.8
1,275,508	-				-1.7
1,275,543	-				-3.1
1,275,546	+				-1.7
1,275,546	+				-1.1
1,275,561	-				-0.7