Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06563 and H281DRAFT_06564 are separated by 136 nucleotides H281DRAFT_06564 and H281DRAFT_06565 are separated by 624 nucleotides H281DRAFT_06565 and H281DRAFT_06566 are separated by 259 nucleotides
H281DRAFT_06563: H281DRAFT_06563 - hypothetical protein, at 3,583 to 3,846
_06563
H281DRAFT_06564: H281DRAFT_06564 - hypothetical protein, at 3,983 to 4,183
_06564
H281DRAFT_06565: H281DRAFT_06565 - filamentous hemagglutinin family N-terminal domain-containing protein, at 4,808 to 7,060
_06565
H281DRAFT_06566: H281DRAFT_06566 - hypothetical protein, at 7,320 to 7,823
_06566
Position (kb) 4
5
6
7
8 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 3.873 kb on + strand at 3.873 kb on + strand at 3.874 kb on - strand at 3.940 kb on - strand at 3.971 kb on + strand at 4.044 kb on - strand, within H281DRAFT_06564 at 4.044 kb on - strand, within H281DRAFT_06564 at 4.117 kb on + strand, within H281DRAFT_06564 at 4.117 kb on + strand, within H281DRAFT_06564 at 4.118 kb on - strand, within H281DRAFT_06564 at 4.118 kb on - strand, within H281DRAFT_06564 at 4.118 kb on - strand, within H281DRAFT_06564 at 4.181 kb on + strand at 4.182 kb on - strand at 4.227 kb on + strand at 4.227 kb on + strand at 4.227 kb on + strand at 4.228 kb on - strand at 4.228 kb on - strand at 4.290 kb on + strand at 4.290 kb on + strand at 4.291 kb on - strand at 4.292 kb on + strand at 4.292 kb on + strand at 4.292 kb on + strand at 4.293 kb on - strand at 4.293 kb on - strand at 4.293 kb on - strand at 4.295 kb on + strand at 4.296 kb on - strand at 4.346 kb on + strand at 4.346 kb on + strand at 4.346 kb on + strand at 4.347 kb on - strand at 4.445 kb on + strand at 4.445 kb on + strand at 4.446 kb on - strand at 4.446 kb on - strand at 4.531 kb on + strand at 4.532 kb on - strand at 4.608 kb on + strand at 4.608 kb on + strand at 4.609 kb on - strand at 4.634 kb on - strand at 4.778 kb on - strand at 4.992 kb on + strand at 4.993 kb on - strand at 5.020 kb on - strand at 5.163 kb on + strand, within H281DRAFT_06565 at 5.164 kb on - strand, within H281DRAFT_06565 at 5.164 kb on - strand, within H281DRAFT_06565 at 5.164 kb on - strand, within H281DRAFT_06565 at 5.164 kb on - strand, within H281DRAFT_06565 at 5.262 kb on + strand, within H281DRAFT_06565 at 5.310 kb on + strand, within H281DRAFT_06565 at 5.323 kb on - strand, within H281DRAFT_06565 at 5.338 kb on + strand, within H281DRAFT_06565 at 5.356 kb on - strand, within H281DRAFT_06565 at 5.388 kb on + strand, within H281DRAFT_06565 at 5.389 kb on - strand, within H281DRAFT_06565 at 5.400 kb on + strand, within H281DRAFT_06565 at 5.401 kb on - strand, within H281DRAFT_06565 at 5.488 kb on + strand, within H281DRAFT_06565 at 5.604 kb on - strand, within H281DRAFT_06565 at 5.695 kb on - strand, within H281DRAFT_06565 at 5.743 kb on - strand, within H281DRAFT_06565 at 6.203 kb on - strand, within H281DRAFT_06565 at 6.203 kb on - strand, within H281DRAFT_06565 at 6.686 kb on + strand, within H281DRAFT_06565 at 6.709 kb on - strand, within H281DRAFT_06565 at 6.921 kb on + strand at 6.921 kb on + strand at 7.006 kb on + strand at 7.006 kb on + strand at 7.006 kb on + strand at 7.006 kb on + strand at 7.006 kb on + strand at 7.006 kb on + strand at 7.007 kb on - strand at 7.007 kb on - strand at 7.007 kb on - strand at 7.007 kb on - strand at 7.010 kb on + strand at 7.049 kb on - strand at 7.140 kb on + strand at 7.153 kb on + strand at 7.157 kb on + strand at 7.157 kb on + strand at 7.261 kb on + strand at 7.307 kb on + strand at 7.307 kb on + strand at 7.331 kb on - strand at 7.473 kb on + strand, within H281DRAFT_06566 at 7.531 kb on + strand, within H281DRAFT_06566 at 7.531 kb on + strand, within H281DRAFT_06566 at 7.531 kb on + strand, within H281DRAFT_06566 at 7.532 kb on - strand, within H281DRAFT_06566 at 7.532 kb on - strand, within H281DRAFT_06566 at 7.575 kb on - strand, within H281DRAFT_06566 at 7.575 kb on - strand, within H281DRAFT_06566 at 7.579 kb on + strand, within H281DRAFT_06566 at 7.647 kb on + strand, within H281DRAFT_06566 at 7.706 kb on + strand, within H281DRAFT_06566 at 7.706 kb on + strand, within H281DRAFT_06566 at 7.706 kb on + strand, within H281DRAFT_06566 at 7.706 kb on + strand, within H281DRAFT_06566 at 7.706 kb on + strand, within H281DRAFT_06566 at 7.707 kb on - strand, within H281DRAFT_06566 at 7.710 kb on + strand, within H281DRAFT_06566 at 7.710 kb on + strand, within H281DRAFT_06566 at 7.729 kb on + strand, within H281DRAFT_06566 at 7.729 kb on + strand, within H281DRAFT_06566 at 7.730 kb on - strand, within H281DRAFT_06566 at 7.730 kb on - strand, within H281DRAFT_06566 at 7.767 kb on - strand, within H281DRAFT_06566 at 7.864 kb on + strand at 7.865 kb on - strand at 7.873 kb on - strand at 8.031 kb on + strand at 8.031 kb on + strand at 8.032 kb on - strand at 8.032 kb on - strand at 8.032 kb on - strand at 8.045 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 3,873 + -0.0 3,873 + -0.1 3,874 - +0.2 3,940 - +0.5 3,971 + -0.2 4,044 - H281DRAFT_06564 0.30 -0.6 4,044 - H281DRAFT_06564 0.30 +0.2 4,117 + H281DRAFT_06564 0.67 +0.3 4,117 + H281DRAFT_06564 0.67 +1.0 4,118 - H281DRAFT_06564 0.67 -0.1 4,118 - H281DRAFT_06564 0.67 -1.0 4,118 - H281DRAFT_06564 0.67 +1.8 4,181 + +0.0 4,182 - -0.7 4,227 + +0.5 4,227 + +0.2 4,227 + +0.1 4,228 - -2.8 4,228 - +0.7 4,290 + -0.8 4,290 + +0.2 4,291 - +1.2 4,292 + -0.4 4,292 + +0.6 4,292 + +0.4 4,293 - -0.8 4,293 - -0.8 4,293 - -0.1 4,295 + -0.1 4,296 - +0.1 4,346 + +0.1 4,346 + +0.6 4,346 + -1.1 4,347 - -1.8 4,445 + +0.3 4,445 + -0.5 4,446 - -0.5 4,446 - -0.7 4,531 + -0.4 4,532 - -0.7 4,608 + +0.2 4,608 + -0.9 4,609 - +1.3 4,634 - -0.2 4,778 - -0.4 4,992 + +0.2 4,993 - +0.3 5,020 - -1.0 5,163 + H281DRAFT_06565 0.16 +0.6 5,164 - H281DRAFT_06565 0.16 -0.2 5,164 - H281DRAFT_06565 0.16 +0.8 5,164 - H281DRAFT_06565 0.16 +0.1 5,164 - H281DRAFT_06565 0.16 +0.3 5,262 + H281DRAFT_06565 0.20 -0.0 5,310 + H281DRAFT_06565 0.22 +2.8 5,323 - H281DRAFT_06565 0.23 -1.5 5,338 + H281DRAFT_06565 0.24 +0.1 5,356 - H281DRAFT_06565 0.24 -0.9 5,388 + H281DRAFT_06565 0.26 +1.2 5,389 - H281DRAFT_06565 0.26 +0.2 5,400 + H281DRAFT_06565 0.26 -0.1 5,401 - H281DRAFT_06565 0.26 +0.2 5,488 + H281DRAFT_06565 0.30 -1.3 5,604 - H281DRAFT_06565 0.35 +0.6 5,695 - H281DRAFT_06565 0.39 +0.5 5,743 - H281DRAFT_06565 0.42 +0.1 6,203 - H281DRAFT_06565 0.62 -1.0 6,203 - H281DRAFT_06565 0.62 -0.3 6,686 + H281DRAFT_06565 0.83 -0.7 6,709 - H281DRAFT_06565 0.84 +0.6 6,921 + +0.2 6,921 + -0.4 7,006 + +0.2 7,006 + -1.8 7,006 + +0.5 7,006 + -0.5 7,006 + -0.1 7,006 + -0.3 7,007 - -0.7 7,007 - +0.4 7,007 - +0.6 7,007 - +1.4 7,010 + +0.7 7,049 - +0.4 7,140 + -0.5 7,153 + -0.0 7,157 + -0.6 7,157 + -0.5 7,261 + -0.7 7,307 + -0.4 7,307 + -0.5 7,331 - -1.0 7,473 + H281DRAFT_06566 0.30 -2.1 7,531 + H281DRAFT_06566 0.42 +0.4 7,531 + H281DRAFT_06566 0.42 -0.8 7,531 + H281DRAFT_06566 0.42 +0.8 7,532 - H281DRAFT_06566 0.42 -0.7 7,532 - H281DRAFT_06566 0.42 +0.3 7,575 - H281DRAFT_06566 0.51 -0.0 7,575 - H281DRAFT_06566 0.51 +1.1 7,579 + H281DRAFT_06566 0.51 -1.1 7,647 + H281DRAFT_06566 0.65 -0.0 7,706 + H281DRAFT_06566 0.77 -0.5 7,706 + H281DRAFT_06566 0.77 -0.1 7,706 + H281DRAFT_06566 0.77 +0.1 7,706 + H281DRAFT_06566 0.77 +0.5 7,706 + H281DRAFT_06566 0.77 +1.1 7,707 - H281DRAFT_06566 0.77 +0.6 7,710 + H281DRAFT_06566 0.77 +0.2 7,710 + H281DRAFT_06566 0.77 -0.1 7,729 + H281DRAFT_06566 0.81 -1.2 7,729 + H281DRAFT_06566 0.81 +0.8 7,730 - H281DRAFT_06566 0.81 -0.1 7,730 - H281DRAFT_06566 0.81 -0.2 7,767 - H281DRAFT_06566 0.89 -0.4 7,864 + +0.3 7,865 - +1.4 7,873 - +1.1 8,031 + +0.1 8,031 + +0.4 8,032 - -0.7 8,032 - -0.6 8,032 - +0.6 8,045 + +0.1
Or see this region's nucleotide sequence