Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06415 and H281DRAFT_06416 are separated by 12 nucleotides H281DRAFT_06416 and H281DRAFT_06417 are separated by 321 nucleotides H281DRAFT_06417 and H281DRAFT_06418 are separated by 325 nucleotides H281DRAFT_06418 and H281DRAFT_06419 overlap by 4 nucleotides
H281DRAFT_06415: H281DRAFT_06415 - hypothetical protein, at 15,130 to 15,894
_06415
H281DRAFT_06416: H281DRAFT_06416 - Zn-dependent alcohol dehydrogenases, class III, at 15,907 to 16,434
_06416
H281DRAFT_06417: H281DRAFT_06417 - Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family, at 16,756 to 17,805
_06417
H281DRAFT_06418: H281DRAFT_06418 - RES domain-containing protein, at 18,131 to 18,604
_06418
H281DRAFT_06419: H281DRAFT_06419 - putative toxin-antitoxin system antitoxin component, TIGR02293 family, at 18,601 to 19,029
_06419
Position (kb)
16
17
18 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 15.758 kb on + strand, within H281DRAFT_06415 at 15.759 kb on - strand, within H281DRAFT_06415 at 15.810 kb on + strand, within H281DRAFT_06415 at 15.810 kb on + strand, within H281DRAFT_06415 at 15.811 kb on - strand, within H281DRAFT_06415 at 15.836 kb on - strand at 15.957 kb on + strand at 15.957 kb on + strand at 15.957 kb on + strand at 15.957 kb on + strand at 15.958 kb on - strand at 15.961 kb on - strand, within H281DRAFT_06416 at 15.961 kb on - strand, within H281DRAFT_06416 at 15.961 kb on - strand, within H281DRAFT_06416 at 15.987 kb on + strand, within H281DRAFT_06416 at 16.088 kb on - strand, within H281DRAFT_06416 at 16.101 kb on + strand, within H281DRAFT_06416 at 16.101 kb on + strand, within H281DRAFT_06416 at 16.300 kb on + strand, within H281DRAFT_06416 at 16.300 kb on + strand, within H281DRAFT_06416 at 16.300 kb on + strand, within H281DRAFT_06416 at 16.301 kb on - strand, within H281DRAFT_06416 at 16.301 kb on - strand, within H281DRAFT_06416 at 16.417 kb on + strand at 16.417 kb on + strand at 16.417 kb on + strand at 16.417 kb on + strand at 16.417 kb on + strand at 16.462 kb on + strand at 16.497 kb on + strand at 16.523 kb on + strand at 16.523 kb on + strand at 16.524 kb on - strand at 16.557 kb on + strand at 16.578 kb on + strand at 16.578 kb on + strand at 16.578 kb on + strand at 16.578 kb on + strand at 16.579 kb on - strand at 16.730 kb on - strand at 16.730 kb on - strand at 16.733 kb on + strand at 16.757 kb on + strand at 16.757 kb on + strand at 16.940 kb on - strand, within H281DRAFT_06417 at 17.018 kb on + strand, within H281DRAFT_06417 at 17.060 kb on + strand, within H281DRAFT_06417 at 17.061 kb on - strand, within H281DRAFT_06417 at 17.061 kb on - strand, within H281DRAFT_06417 at 17.081 kb on + strand, within H281DRAFT_06417 at 17.082 kb on - strand, within H281DRAFT_06417 at 17.082 kb on - strand, within H281DRAFT_06417 at 17.089 kb on + strand, within H281DRAFT_06417 at 17.089 kb on + strand, within H281DRAFT_06417 at 17.089 kb on + strand, within H281DRAFT_06417 at 17.089 kb on + strand, within H281DRAFT_06417 at 17.089 kb on + strand, within H281DRAFT_06417 at 17.090 kb on - strand, within H281DRAFT_06417 at 17.181 kb on + strand, within H281DRAFT_06417 at 17.182 kb on - strand, within H281DRAFT_06417 at 17.255 kb on + strand, within H281DRAFT_06417 at 17.541 kb on - strand, within H281DRAFT_06417 at 17.541 kb on - strand, within H281DRAFT_06417 at 17.571 kb on + strand, within H281DRAFT_06417 at 17.676 kb on - strand, within H281DRAFT_06417 at 17.900 kb on + strand at 17.901 kb on - strand at 17.901 kb on - strand at 17.901 kb on - strand at 17.901 kb on - strand at 17.902 kb on + strand at 17.902 kb on + strand at 17.902 kb on + strand at 17.902 kb on + strand at 17.902 kb on + strand at 17.902 kb on + strand at 17.902 kb on + strand at 17.903 kb on - strand at 18.002 kb on + strand at 18.002 kb on + strand at 18.002 kb on + strand at 18.002 kb on + strand at 18.003 kb on - strand at 18.003 kb on - strand at 18.003 kb on - strand at 18.003 kb on - strand at 18.009 kb on + strand at 18.009 kb on + strand at 18.010 kb on - strand at 18.010 kb on - strand at 18.011 kb on + strand at 18.011 kb on + strand at 18.011 kb on + strand at 18.011 kb on + strand at 18.011 kb on + strand at 18.011 kb on + strand at 18.012 kb on - strand at 18.012 kb on - strand at 18.012 kb on - strand at 18.012 kb on - strand at 18.055 kb on - strand at 18.060 kb on - strand at 18.127 kb on + strand at 18.128 kb on - strand at 18.128 kb on - strand at 18.132 kb on + strand at 18.133 kb on - strand at 18.273 kb on - strand, within H281DRAFT_06418 at 18.273 kb on - strand, within H281DRAFT_06418 at 18.273 kb on - strand, within H281DRAFT_06418 at 18.437 kb on + strand, within H281DRAFT_06418 at 18.438 kb on - strand, within H281DRAFT_06418 at 18.502 kb on - strand, within H281DRAFT_06418 at 18.572 kb on - strand at 18.572 kb on - strand at 18.572 kb on - strand at 18.618 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 15,758 + H281DRAFT_06415 0.82 +0.3 15,759 - H281DRAFT_06415 0.82 +0.6 15,810 + H281DRAFT_06415 0.89 -0.5 15,810 + H281DRAFT_06415 0.89 -0.1 15,811 - H281DRAFT_06415 0.89 +0.2 15,836 - +0.9 15,957 + +0.6 15,957 + -2.0 15,957 + +1.1 15,957 + -1.2 15,958 - +0.7 15,961 - H281DRAFT_06416 0.10 +0.2 15,961 - H281DRAFT_06416 0.10 -0.1 15,961 - H281DRAFT_06416 0.10 +0.5 15,987 + H281DRAFT_06416 0.15 -0.5 16,088 - H281DRAFT_06416 0.34 -0.4 16,101 + H281DRAFT_06416 0.37 +0.3 16,101 + H281DRAFT_06416 0.37 +0.9 16,300 + H281DRAFT_06416 0.74 -0.5 16,300 + H281DRAFT_06416 0.74 +0.3 16,300 + H281DRAFT_06416 0.74 +0.6 16,301 - H281DRAFT_06416 0.75 +0.0 16,301 - H281DRAFT_06416 0.75 -0.6 16,417 + -0.8 16,417 + +0.3 16,417 + +0.0 16,417 + -0.4 16,417 + -0.3 16,462 + -0.1 16,497 + -0.7 16,523 + -0.2 16,523 + +0.1 16,524 - -0.0 16,557 + +0.1 16,578 + +0.1 16,578 + -0.3 16,578 + -0.0 16,578 + +0.3 16,579 - +0.5 16,730 - -0.7 16,730 - +1.0 16,733 + -0.4 16,757 + -0.7 16,757 + +0.7 16,940 - H281DRAFT_06417 0.18 +1.6 17,018 + H281DRAFT_06417 0.25 +0.4 17,060 + H281DRAFT_06417 0.29 +0.2 17,061 - H281DRAFT_06417 0.29 -1.1 17,061 - H281DRAFT_06417 0.29 -0.4 17,081 + H281DRAFT_06417 0.31 +0.7 17,082 - H281DRAFT_06417 0.31 +0.2 17,082 - H281DRAFT_06417 0.31 -2.8 17,089 + H281DRAFT_06417 0.32 -0.2 17,089 + H281DRAFT_06417 0.32 -0.3 17,089 + H281DRAFT_06417 0.32 -0.1 17,089 + H281DRAFT_06417 0.32 +0.5 17,089 + H281DRAFT_06417 0.32 -0.4 17,090 - H281DRAFT_06417 0.32 -0.1 17,181 + H281DRAFT_06417 0.40 +0.2 17,182 - H281DRAFT_06417 0.41 +1.8 17,255 + H281DRAFT_06417 0.48 -0.8 17,541 - H281DRAFT_06417 0.75 -0.0 17,541 - H281DRAFT_06417 0.75 +0.4 17,571 + H281DRAFT_06417 0.78 -0.1 17,676 - H281DRAFT_06417 0.88 -0.1 17,900 + -0.3 17,901 - +0.0 17,901 - -1.1 17,901 - -0.3 17,901 - -0.2 17,902 + +0.1 17,902 + +0.6 17,902 + -1.2 17,902 + -0.1 17,902 + -1.1 17,902 + +0.1 17,902 + -0.7 17,903 - +0.5 18,002 + -0.9 18,002 + +1.8 18,002 + +0.6 18,002 + +2.3 18,003 - -2.5 18,003 - -1.1 18,003 - -0.1 18,003 - +0.2 18,009 + -2.0 18,009 + +0.9 18,010 - +0.7 18,010 - -0.0 18,011 + +0.2 18,011 + -0.4 18,011 + -1.9 18,011 + +0.6 18,011 + -1.5 18,011 + -0.6 18,012 - -0.9 18,012 - -1.3 18,012 - -0.6 18,012 - +0.1 18,055 - +0.8 18,060 - +0.3 18,127 + +1.7 18,128 - +0.4 18,128 - +0.1 18,132 + -0.2 18,133 - -0.7 18,273 - H281DRAFT_06418 0.30 -0.6 18,273 - H281DRAFT_06418 0.30 +0.3 18,273 - H281DRAFT_06418 0.30 +0.3 18,437 + H281DRAFT_06418 0.65 -1.5 18,438 - H281DRAFT_06418 0.65 -0.5 18,502 - H281DRAFT_06418 0.78 +0.1 18,572 - -0.3 18,572 - -0.9 18,572 - +0.7 18,618 - +1.1
Or see this region's nucleotide sequence