Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06410 and H281DRAFT_06411 are separated by 77 nucleotides H281DRAFT_06411 and H281DRAFT_06412 are separated by 375 nucleotides
H281DRAFT_06410: H281DRAFT_06410 - Ribosomal protein L11 methylase, at 8,301 to 9,245
_06410
H281DRAFT_06411: H281DRAFT_06411 - hypothetical protein, at 9,323 to 10,294
_06411
H281DRAFT_06412: H281DRAFT_06412 - Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II, at 10,670 to 12,133
_06412
Position (kb)
9
10
11 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 8.344 kb on + strand at 8.362 kb on + strand at 8.402 kb on - strand, within H281DRAFT_06410 at 8.449 kb on + strand, within H281DRAFT_06410 at 8.449 kb on + strand, within H281DRAFT_06410 at 8.459 kb on + strand, within H281DRAFT_06410 at 8.547 kb on + strand, within H281DRAFT_06410 at 8.547 kb on + strand, within H281DRAFT_06410 at 8.555 kb on + strand, within H281DRAFT_06410 at 8.589 kb on - strand, within H281DRAFT_06410 at 8.625 kb on - strand, within H281DRAFT_06410 at 8.637 kb on - strand, within H281DRAFT_06410 at 8.640 kb on + strand, within H281DRAFT_06410 at 8.640 kb on + strand, within H281DRAFT_06410 at 8.643 kb on - strand, within H281DRAFT_06410 at 8.654 kb on - strand, within H281DRAFT_06410 at 8.786 kb on + strand, within H281DRAFT_06410 at 8.786 kb on + strand, within H281DRAFT_06410 at 8.786 kb on + strand, within H281DRAFT_06410 at 8.786 kb on + strand, within H281DRAFT_06410 at 8.787 kb on - strand at 8.787 kb on - strand, within H281DRAFT_06410 at 8.790 kb on + strand, within H281DRAFT_06410 at 8.791 kb on - strand, within H281DRAFT_06410 at 8.835 kb on + strand, within H281DRAFT_06410 at 8.836 kb on - strand, within H281DRAFT_06410 at 8.857 kb on + strand, within H281DRAFT_06410 at 8.983 kb on + strand, within H281DRAFT_06410 at 8.984 kb on - strand, within H281DRAFT_06410 at 9.003 kb on + strand at 9.004 kb on - strand, within H281DRAFT_06410 at 9.004 kb on - strand, within H281DRAFT_06410 at 9.098 kb on + strand, within H281DRAFT_06410 at 9.120 kb on + strand, within H281DRAFT_06410 at 9.120 kb on + strand, within H281DRAFT_06410 at 9.120 kb on + strand, within H281DRAFT_06410 at 9.121 kb on - strand, within H281DRAFT_06410 at 9.121 kb on - strand, within H281DRAFT_06410 at 9.247 kb on - strand at 9.255 kb on - strand at 9.255 kb on - strand at 9.279 kb on - strand at 9.279 kb on - strand at 9.279 kb on - strand at 9.297 kb on + strand at 9.323 kb on - strand at 9.379 kb on + strand at 9.380 kb on - strand at 9.380 kb on - strand at 9.417 kb on + strand at 9.422 kb on - strand, within H281DRAFT_06411 at 9.424 kb on + strand, within H281DRAFT_06411 at 9.424 kb on + strand, within H281DRAFT_06411 at 9.445 kb on + strand, within H281DRAFT_06411 at 9.445 kb on + strand, within H281DRAFT_06411 at 9.445 kb on + strand at 9.445 kb on + strand at 9.446 kb on - strand, within H281DRAFT_06411 at 9.463 kb on - strand, within H281DRAFT_06411 at 9.549 kb on + strand, within H281DRAFT_06411 at 9.549 kb on + strand, within H281DRAFT_06411 at 9.549 kb on + strand, within H281DRAFT_06411 at 9.549 kb on + strand, within H281DRAFT_06411 at 9.550 kb on - strand at 9.580 kb on + strand, within H281DRAFT_06411 at 9.580 kb on + strand, within H281DRAFT_06411 at 9.581 kb on - strand, within H281DRAFT_06411 at 9.581 kb on - strand, within H281DRAFT_06411 at 9.581 kb on - strand, within H281DRAFT_06411 at 9.584 kb on + strand, within H281DRAFT_06411 at 9.584 kb on + strand, within H281DRAFT_06411 at 9.584 kb on + strand, within H281DRAFT_06411 at 9.585 kb on - strand, within H281DRAFT_06411 at 9.585 kb on - strand, within H281DRAFT_06411 at 9.592 kb on + strand, within H281DRAFT_06411 at 9.593 kb on - strand, within H281DRAFT_06411 at 9.594 kb on + strand, within H281DRAFT_06411 at 9.594 kb on + strand, within H281DRAFT_06411 at 9.594 kb on + strand, within H281DRAFT_06411 at 9.690 kb on + strand, within H281DRAFT_06411 at 9.691 kb on - strand, within H281DRAFT_06411 at 9.711 kb on - strand at 9.711 kb on - strand, within H281DRAFT_06411 at 9.734 kb on - strand, within H281DRAFT_06411 at 9.907 kb on + strand, within H281DRAFT_06411 at 9.952 kb on + strand, within H281DRAFT_06411 at 9.953 kb on - strand, within H281DRAFT_06411 at 10.123 kb on - strand, within H281DRAFT_06411 at 10.168 kb on + strand, within H281DRAFT_06411 at 10.168 kb on + strand, within H281DRAFT_06411 at 10.168 kb on + strand, within H281DRAFT_06411 at 10.227 kb on + strand at 10.228 kb on - strand at 10.228 kb on - strand at 10.231 kb on + strand at 10.231 kb on + strand at 10.231 kb on + strand at 10.232 kb on - strand at 10.232 kb on - strand at 10.261 kb on - strand at 10.261 kb on - strand at 10.378 kb on + strand at 10.378 kb on + strand at 10.378 kb on + strand at 10.379 kb on - strand at 10.400 kb on + strand at 10.401 kb on - strand at 10.512 kb on + strand at 10.512 kb on + strand at 10.513 kb on - strand at 10.513 kb on - strand at 10.538 kb on + strand at 10.539 kb on - strand at 10.564 kb on + strand at 10.565 kb on - strand at 10.578 kb on + strand at 10.579 kb on - strand at 10.579 kb on - strand at 10.706 kb on - strand at 10.805 kb on + strand at 10.829 kb on - strand, within H281DRAFT_06412 at 10.829 kb on - strand, within H281DRAFT_06412 at 10.831 kb on + strand, within H281DRAFT_06412 at 10.862 kb on + strand, within H281DRAFT_06412 at 10.891 kb on - strand, within H281DRAFT_06412 at 10.896 kb on + strand, within H281DRAFT_06412 at 10.897 kb on - strand, within H281DRAFT_06412 at 10.897 kb on - strand, within H281DRAFT_06412 at 10.897 kb on - strand, within H281DRAFT_06412 at 10.965 kb on + strand, within H281DRAFT_06412 at 11.055 kb on - strand, within H281DRAFT_06412 at 11.055 kb on - strand, within H281DRAFT_06412 at 11.128 kb on - strand, within H281DRAFT_06412 at 11.210 kb on + strand, within H281DRAFT_06412 at 11.210 kb on + strand, within H281DRAFT_06412 at 11.211 kb on - strand, within H281DRAFT_06412
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 8,344 + +1.1 8,362 + +2.5 8,402 - H281DRAFT_06410 0.11 -1.0 8,449 + H281DRAFT_06410 0.16 +1.0 8,449 + H281DRAFT_06410 0.16 -2.0 8,459 + H281DRAFT_06410 0.17 +0.4 8,547 + H281DRAFT_06410 0.26 +1.6 8,547 + H281DRAFT_06410 0.26 -0.1 8,555 + H281DRAFT_06410 0.27 +0.3 8,589 - H281DRAFT_06410 0.30 +0.1 8,625 - H281DRAFT_06410 0.34 +1.3 8,637 - H281DRAFT_06410 0.36 +1.7 8,640 + H281DRAFT_06410 0.36 +0.9 8,640 + H281DRAFT_06410 0.36 +1.0 8,643 - H281DRAFT_06410 0.36 +0.8 8,654 - H281DRAFT_06410 0.37 +1.2 8,786 + H281DRAFT_06410 0.51 +1.0 8,786 + H281DRAFT_06410 0.51 -0.1 8,786 + H281DRAFT_06410 0.51 +0.8 8,786 + H281DRAFT_06410 0.51 +0.2 8,787 - +0.7 8,787 - H281DRAFT_06410 0.51 +1.6 8,790 + H281DRAFT_06410 0.52 +0.8 8,791 - H281DRAFT_06410 0.52 +0.6 8,835 + H281DRAFT_06410 0.57 +1.0 8,836 - H281DRAFT_06410 0.57 +0.6 8,857 + H281DRAFT_06410 0.59 +0.6 8,983 + H281DRAFT_06410 0.72 -0.5 8,984 - H281DRAFT_06410 0.72 +0.4 9,003 + +2.1 9,004 - H281DRAFT_06410 0.74 +2.4 9,004 - H281DRAFT_06410 0.74 +1.1 9,098 + H281DRAFT_06410 0.84 +0.6 9,120 + H281DRAFT_06410 0.87 +1.7 9,120 + H281DRAFT_06410 0.87 +1.0 9,120 + H281DRAFT_06410 0.87 -0.5 9,121 - H281DRAFT_06410 0.87 -0.4 9,121 - H281DRAFT_06410 0.87 +1.5 9,247 - +0.4 9,255 - -2.5 9,255 - +0.7 9,279 - +1.0 9,279 - +0.4 9,279 - +0.8 9,297 + +1.0 9,323 - +0.6 9,379 + +0.1 9,380 - +0.8 9,380 - +0.6 9,417 + +0.6 9,422 - H281DRAFT_06411 0.10 +0.8 9,424 + H281DRAFT_06411 0.10 +0.9 9,424 + H281DRAFT_06411 0.10 +0.8 9,445 + H281DRAFT_06411 0.13 +1.1 9,445 + H281DRAFT_06411 0.13 +0.6 9,445 + -0.5 9,445 + +0.1 9,446 - H281DRAFT_06411 0.13 +0.7 9,463 - H281DRAFT_06411 0.14 +0.6 9,549 + H281DRAFT_06411 0.23 +0.2 9,549 + H281DRAFT_06411 0.23 +0.2 9,549 + H281DRAFT_06411 0.23 +0.6 9,549 + H281DRAFT_06411 0.23 +1.5 9,550 - +0.5 9,580 + H281DRAFT_06411 0.26 +1.4 9,580 + H281DRAFT_06411 0.26 +0.1 9,581 - H281DRAFT_06411 0.27 +1.8 9,581 - H281DRAFT_06411 0.27 +0.9 9,581 - H281DRAFT_06411 0.27 +1.1 9,584 + H281DRAFT_06411 0.27 -0.1 9,584 + H281DRAFT_06411 0.27 -0.7 9,584 + H281DRAFT_06411 0.27 +2.4 9,585 - H281DRAFT_06411 0.27 -0.6 9,585 - H281DRAFT_06411 0.27 +1.5 9,592 + H281DRAFT_06411 0.28 +0.8 9,593 - H281DRAFT_06411 0.28 +0.4 9,594 + H281DRAFT_06411 0.28 +1.5 9,594 + H281DRAFT_06411 0.28 +1.0 9,594 + H281DRAFT_06411 0.28 +0.4 9,690 + H281DRAFT_06411 0.38 -1.9 9,691 - H281DRAFT_06411 0.38 +0.8 9,711 - -0.9 9,711 - H281DRAFT_06411 0.40 +0.4 9,734 - H281DRAFT_06411 0.42 -0.7 9,907 + H281DRAFT_06411 0.60 +2.1 9,952 + H281DRAFT_06411 0.65 +0.5 9,953 - H281DRAFT_06411 0.65 +1.1 10,123 - H281DRAFT_06411 0.82 +1.4 10,168 + H281DRAFT_06411 0.87 +0.9 10,168 + H281DRAFT_06411 0.87 +0.9 10,168 + H281DRAFT_06411 0.87 +1.8 10,227 + +0.7 10,228 - +1.6 10,228 - +1.7 10,231 + +2.7 10,231 + +0.7 10,231 + +0.1 10,232 - +0.8 10,232 - +0.9 10,261 - +1.8 10,261 - +1.1 10,378 + +1.5 10,378 + +0.7 10,378 + +2.0 10,379 - +0.2 10,400 + -1.4 10,401 - -0.6 10,512 + +0.4 10,512 + +0.4 10,513 - +0.8 10,513 - +0.9 10,538 + +0.0 10,539 - +0.6 10,564 + +0.5 10,565 - -1.1 10,578 + -1.2 10,579 - +1.4 10,579 - +1.2 10,706 - -0.3 10,805 + +1.6 10,829 - H281DRAFT_06412 0.11 +0.3 10,829 - H281DRAFT_06412 0.11 +1.3 10,831 + H281DRAFT_06412 0.11 +0.8 10,862 + H281DRAFT_06412 0.13 +2.8 10,891 - H281DRAFT_06412 0.15 +0.3 10,896 + H281DRAFT_06412 0.15 -0.9 10,897 - H281DRAFT_06412 0.16 +0.4 10,897 - H281DRAFT_06412 0.16 +0.4 10,897 - H281DRAFT_06412 0.16 +0.3 10,965 + H281DRAFT_06412 0.20 +0.7 11,055 - H281DRAFT_06412 0.26 -0.1 11,055 - H281DRAFT_06412 0.26 +1.5 11,128 - H281DRAFT_06412 0.31 +0.5 11,210 + H281DRAFT_06412 0.37 +0.0 11,210 + H281DRAFT_06412 0.37 +2.0 11,211 - H281DRAFT_06412 0.37 +0.9
Or see this region's nucleotide sequence