Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06393 and H281DRAFT_06394 are separated by 32 nucleotides H281DRAFT_06394 and H281DRAFT_06395 overlap by 4 nucleotides H281DRAFT_06395 and H281DRAFT_06396 overlap by 4 nucleotides
H281DRAFT_06393: H281DRAFT_06393 - N-carbamoyl-L-amino-acid hydrolase, at 64,284 to 65,582
_06393
H281DRAFT_06394: H281DRAFT_06394 - amino acid/amide ABC transporter ATP-binding protein 2, HAAT family, at 65,615 to 66,316
_06394
H281DRAFT_06395: H281DRAFT_06395 - amino acid/amide ABC transporter ATP-binding protein 1, HAAT family, at 66,313 to 67,080
_06395
H281DRAFT_06396: H281DRAFT_06396 - amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-), at 67,077 to 68,141
_06396
Position (kb) 66
67
68 Strain fitness (log2 ratio) -2
-1
0
1 at 65.715 kb on + strand, within H281DRAFT_06394 at 67.003 kb on + strand, within H281DRAFT_06395 at 67.189 kb on + strand, within H281DRAFT_06396 at 67.273 kb on + strand, within H281DRAFT_06396 at 67.273 kb on + strand, within H281DRAFT_06396 at 67.530 kb on + strand, within H281DRAFT_06396 at 67.531 kb on - strand, within H281DRAFT_06396 at 67.718 kb on - strand, within H281DRAFT_06396 at 67.757 kb on - strand, within H281DRAFT_06396 at 67.757 kb on - strand, within H281DRAFT_06396 at 67.883 kb on - strand at 67.975 kb on - strand, within H281DRAFT_06396
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 65,715 + H281DRAFT_06394 0.14 +0.2 67,003 + H281DRAFT_06395 0.90 -1.7 67,189 + H281DRAFT_06396 0.11 -0.7 67,273 + H281DRAFT_06396 0.18 +0.4 67,273 + H281DRAFT_06396 0.18 -0.6 67,530 + H281DRAFT_06396 0.43 -2.0 67,531 - H281DRAFT_06396 0.43 +0.8 67,718 - H281DRAFT_06396 0.60 +0.3 67,757 - H281DRAFT_06396 0.64 +0.3 67,757 - H281DRAFT_06396 0.64 +0.0 67,883 - +0.1 67,975 - H281DRAFT_06396 0.84 -0.4
Or see this region's nucleotide sequence