Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06203 and H281DRAFT_06204 are separated by 1 nucleotides H281DRAFT_06204 and H281DRAFT_06205 are separated by 182 nucleotides H281DRAFT_06205 and H281DRAFT_06206 are separated by 825 nucleotides
H281DRAFT_06203: H281DRAFT_06203 - PAS domain S-box-containing protein, at 94,124 to 95,680
_06203
H281DRAFT_06204: H281DRAFT_06204 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 95,682 to 95,999
_06204
H281DRAFT_06205: H281DRAFT_06205 - transcriptional regulator, GntR family, at 96,182 to 96,907
_06205
H281DRAFT_06206: H281DRAFT_06206 - 2-methylcitrate dehydratase PrpD, at 97,733 to 99,223
_06206
Position (kb) 96
97 Strain fitness (log2 ratio) -2
-1
0
1
2 at 95.209 kb on + strand, within H281DRAFT_06203 at 95.305 kb on - strand, within H281DRAFT_06203 at 95.398 kb on + strand, within H281DRAFT_06203 at 95.399 kb on - strand, within H281DRAFT_06203 at 95.579 kb on + strand at 95.638 kb on - strand at 95.638 kb on - strand at 95.638 kb on - strand at 95.808 kb on - strand, within H281DRAFT_06204 at 95.808 kb on - strand, within H281DRAFT_06204 at 95.808 kb on - strand, within H281DRAFT_06204 at 95.808 kb on - strand, within H281DRAFT_06204 at 95.809 kb on + strand, within H281DRAFT_06204 at 95.809 kb on + strand, within H281DRAFT_06204 at 95.810 kb on - strand at 95.810 kb on - strand, within H281DRAFT_06204 at 95.810 kb on - strand, within H281DRAFT_06204 at 95.810 kb on - strand, within H281DRAFT_06204 at 95.956 kb on - strand, within H281DRAFT_06204 at 96.041 kb on + strand at 96.042 kb on - strand at 96.066 kb on - strand at 96.150 kb on + strand at 96.150 kb on + strand at 96.151 kb on - strand at 96.151 kb on - strand at 96.151 kb on - strand at 96.197 kb on - strand at 96.273 kb on - strand, within H281DRAFT_06205 at 96.332 kb on + strand, within H281DRAFT_06205 at 96.382 kb on + strand, within H281DRAFT_06205 at 96.383 kb on - strand, within H281DRAFT_06205 at 96.383 kb on - strand, within H281DRAFT_06205 at 96.383 kb on - strand, within H281DRAFT_06205 at 96.413 kb on - strand, within H281DRAFT_06205 at 96.499 kb on - strand, within H281DRAFT_06205 at 96.612 kb on + strand, within H281DRAFT_06205 at 96.626 kb on + strand, within H281DRAFT_06205 at 96.626 kb on + strand, within H281DRAFT_06205 at 96.921 kb on - strand at 96.925 kb on - strand at 97.063 kb on + strand at 97.064 kb on - strand at 97.064 kb on - strand at 97.064 kb on - strand at 97.064 kb on - strand at 97.217 kb on - strand at 97.224 kb on + strand at 97.224 kb on + strand at 97.325 kb on + strand at 97.523 kb on - strand at 97.635 kb on - strand at 97.635 kb on - strand at 97.635 kb on - strand at 97.726 kb on + strand at 97.732 kb on + strand at 97.732 kb on + strand at 97.732 kb on + strand at 97.732 kb on + strand at 97.732 kb on + strand at 97.732 kb on + strand at 97.733 kb on - strand at 97.733 kb on - strand at 97.733 kb on - strand at 97.805 kb on - strand at 97.810 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 95,209 + H281DRAFT_06203 0.70 +0.9 95,305 - H281DRAFT_06203 0.76 +0.4 95,398 + H281DRAFT_06203 0.82 -0.1 95,399 - H281DRAFT_06203 0.82 +0.3 95,579 + +0.8 95,638 - -0.4 95,638 - -0.6 95,638 - -0.2 95,808 - H281DRAFT_06204 0.40 +0.8 95,808 - H281DRAFT_06204 0.40 +0.3 95,808 - H281DRAFT_06204 0.40 -0.8 95,808 - H281DRAFT_06204 0.40 +0.4 95,809 + H281DRAFT_06204 0.40 -0.6 95,809 + H281DRAFT_06204 0.40 +0.7 95,810 - +1.5 95,810 - H281DRAFT_06204 0.40 -2.3 95,810 - H281DRAFT_06204 0.40 +0.4 95,810 - H281DRAFT_06204 0.40 +0.8 95,956 - H281DRAFT_06204 0.86 +0.6 96,041 + +0.6 96,042 - +0.1 96,066 - -1.0 96,150 + -1.1 96,150 + +0.7 96,151 - +1.4 96,151 - -1.0 96,151 - +1.1 96,197 - -1.0 96,273 - H281DRAFT_06205 0.13 +0.3 96,332 + H281DRAFT_06205 0.21 +1.3 96,382 + H281DRAFT_06205 0.28 +1.8 96,383 - H281DRAFT_06205 0.28 -0.1 96,383 - H281DRAFT_06205 0.28 +0.5 96,383 - H281DRAFT_06205 0.28 +0.4 96,413 - H281DRAFT_06205 0.32 -0.6 96,499 - H281DRAFT_06205 0.44 -0.2 96,612 + H281DRAFT_06205 0.59 +0.2 96,626 + H281DRAFT_06205 0.61 +0.8 96,626 + H281DRAFT_06205 0.61 +0.5 96,921 - -0.7 96,925 - -0.8 97,063 + -2.1 97,064 - -0.3 97,064 - -1.2 97,064 - -0.2 97,064 - -0.9 97,217 - +0.6 97,224 + +0.0 97,224 + +0.0 97,325 + +0.4 97,523 - -1.3 97,635 - -0.3 97,635 - -0.1 97,635 - -1.2 97,726 + -0.7 97,732 + +0.2 97,732 + -1.1 97,732 + +0.9 97,732 + +0.4 97,732 + +0.7 97,732 + -0.4 97,733 - -0.6 97,733 - +0.0 97,733 - +0.3 97,805 - -0.1 97,810 + -0.4
Or see this region's nucleotide sequence