Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06088 and H281DRAFT_06089 are separated by 191 nucleotides H281DRAFT_06089 and H281DRAFT_06090 are separated by 391 nucleotides H281DRAFT_06090 and H281DRAFT_06091 are separated by 89 nucleotides H281DRAFT_06091 and H281DRAFT_06092 are separated by 328 nucleotides
H281DRAFT_06088: H281DRAFT_06088 - Nucleoside-diphosphate-sugar epimerase, at 106,092 to 106,730
_06088
H281DRAFT_06089: H281DRAFT_06089 - hypothetical protein, at 106,922 to 107,164
_06089
H281DRAFT_06090: H281DRAFT_06090 - N-ethylmaleimide reductase, at 107,556 to 108,770
_06090
H281DRAFT_06091: H281DRAFT_06091 - Protein required for attachment to host cells, at 108,860 to 109,216
_06091
H281DRAFT_06092: H281DRAFT_06092 - Outer membrane protein (porin), at 109,545 to 110,672
_06092
Position (kb)
107
108
109 Strain fitness (log2 ratio)
-1
0
1 at 106.848 kb on - strand at 106.996 kb on + strand, within H281DRAFT_06089 at 107.229 kb on + strand at 107.230 kb on - strand at 107.230 kb on - strand at 107.290 kb on - strand at 107.451 kb on + strand at 107.452 kb on - strand at 107.461 kb on - strand at 107.649 kb on + strand at 107.650 kb on - strand at 107.716 kb on + strand, within H281DRAFT_06090 at 107.717 kb on - strand, within H281DRAFT_06090 at 107.739 kb on + strand, within H281DRAFT_06090 at 107.742 kb on + strand, within H281DRAFT_06090 at 108.082 kb on - strand, within H281DRAFT_06090 at 108.097 kb on - strand, within H281DRAFT_06090 at 108.166 kb on - strand, within H281DRAFT_06090 at 108.216 kb on + strand, within H281DRAFT_06090 at 108.217 kb on - strand, within H281DRAFT_06090 at 108.369 kb on + strand, within H281DRAFT_06090 at 108.406 kb on - strand, within H281DRAFT_06090 at 108.769 kb on - strand at 108.928 kb on + strand, within H281DRAFT_06091 at 109.031 kb on + strand, within H281DRAFT_06091 at 109.031 kb on + strand, within H281DRAFT_06091 at 109.032 kb on - strand, within H281DRAFT_06091 at 109.071 kb on + strand, within H281DRAFT_06091 at 109.235 kb on + strand at 109.236 kb on - strand at 109.236 kb on - strand at 109.245 kb on + strand at 109.324 kb on - strand at 109.337 kb on + strand at 109.430 kb on + strand at 109.495 kb on + strand at 109.539 kb on + strand at 109.626 kb on + strand at 109.626 kb on + strand at 109.653 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 106,848 - -0.1 106,996 + H281DRAFT_06089 0.30 +1.0 107,229 + +0.2 107,230 - +0.2 107,230 - +0.0 107,290 - +0.3 107,451 + +0.2 107,452 - -0.1 107,461 - -0.7 107,649 + -0.4 107,650 - +0.2 107,716 + H281DRAFT_06090 0.13 +0.1 107,717 - H281DRAFT_06090 0.13 -0.9 107,739 + H281DRAFT_06090 0.15 +0.4 107,742 + H281DRAFT_06090 0.15 +0.1 108,082 - H281DRAFT_06090 0.43 -0.9 108,097 - H281DRAFT_06090 0.45 -0.0 108,166 - H281DRAFT_06090 0.50 +1.5 108,216 + H281DRAFT_06090 0.54 -0.3 108,217 - H281DRAFT_06090 0.54 +0.8 108,369 + H281DRAFT_06090 0.67 +0.4 108,406 - H281DRAFT_06090 0.70 -0.2 108,769 - +0.2 108,928 + H281DRAFT_06091 0.19 -0.6 109,031 + H281DRAFT_06091 0.48 +1.0 109,031 + H281DRAFT_06091 0.48 +0.7 109,032 - H281DRAFT_06091 0.48 +0.6 109,071 + H281DRAFT_06091 0.59 +0.0 109,235 + +0.1 109,236 - +0.3 109,236 - -0.1 109,245 + -0.3 109,324 - -0.8 109,337 + +0.4 109,430 + +1.4 109,495 + +0.9 109,539 + +1.4 109,626 + -1.2 109,626 + +1.2 109,653 + +0.8
Or see this region's nucleotide sequence