Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05970 and H281DRAFT_05971 are separated by 114 nucleotides H281DRAFT_05971 and H281DRAFT_05972 are separated by 136 nucleotides H281DRAFT_05972 and H281DRAFT_05973 are separated by 162 nucleotides
H281DRAFT_05970: H281DRAFT_05970 - Undecaprenyl-diphosphatase (EC 3.6.1.27), at 112,952 to 113,554
_05970
H281DRAFT_05971: H281DRAFT_05971 - Uncharacterized membrane protein YoaK, UPF0700 family, at 113,669 to 114,481
_05971
H281DRAFT_05972: H281DRAFT_05972 - conserved hypothetical protein, at 114,618 to 114,932
_05972
H281DRAFT_05973: H281DRAFT_05973 - carbon-monoxide dehydrogenase small subunit, at 115,095 to 115,586
_05973
Position (kb) 113
114
115 Strain fitness (log2 ratio) -2
-1
0
1 at 113.034 kb on + strand, within H281DRAFT_05970 at 113.507 kb on - strand at 113.887 kb on - strand, within H281DRAFT_05971 at 114.400 kb on - strand at 114.604 kb on + strand at 114.621 kb on + strand at 114.857 kb on - strand, within H281DRAFT_05972 at 114.857 kb on - strand, within H281DRAFT_05972 at 114.859 kb on + strand, within H281DRAFT_05972 at 114.896 kb on - strand, within H281DRAFT_05972 at 115.076 kb on - strand at 115.239 kb on - strand, within H281DRAFT_05973
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 113,034 + H281DRAFT_05970 0.14 -2.0 113,507 - +0.6 113,887 - H281DRAFT_05971 0.27 +1.5 114,400 - -1.4 114,604 + -0.0 114,621 + -0.4 114,857 - H281DRAFT_05972 0.76 +1.6 114,857 - H281DRAFT_05972 0.76 -1.5 114,859 + H281DRAFT_05972 0.77 +1.4 114,896 - H281DRAFT_05972 0.88 +0.4 115,076 - +0.3 115,239 - H281DRAFT_05973 0.29 -0.1
Or see this region's nucleotide sequence