Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05909 and H281DRAFT_05910 are separated by 311 nucleotides H281DRAFT_05910 and H281DRAFT_05911 are separated by 24 nucleotides H281DRAFT_05911 and H281DRAFT_05912 are separated by 144 nucleotides H281DRAFT_05912 and H281DRAFT_05913 are separated by 116 nucleotides
H281DRAFT_05909: H281DRAFT_05909 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 44,172 to 44,567
_05909
H281DRAFT_05910: H281DRAFT_05910 - hypothetical protein, at 44,879 to 45,388
_05910
H281DRAFT_05911: H281DRAFT_05911 - hypothetical protein, at 45,413 to 45,727
_05911
H281DRAFT_05912: H281DRAFT_05912 - transcriptional regulator, TetR family, at 45,872 to 46,453
_05912
H281DRAFT_05913: H281DRAFT_05913 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 46,570 to 47,559
_05913
Position (kb) 45
46 Strain fitness (log2 ratio) -2
-1
0
1 at 44.557 kb on - strand at 44.625 kb on - strand at 44.639 kb on - strand at 44.639 kb on - strand at 44.657 kb on - strand at 44.803 kb on - strand at 44.844 kb on + strand at 44.845 kb on - strand at 45.194 kb on + strand, within H281DRAFT_05910 at 45.448 kb on + strand, within H281DRAFT_05911 at 45.472 kb on + strand, within H281DRAFT_05911 at 45.496 kb on + strand, within H281DRAFT_05911 at 45.497 kb on - strand, within H281DRAFT_05911 at 45.497 kb on - strand, within H281DRAFT_05911 at 45.521 kb on + strand, within H281DRAFT_05911 at 45.583 kb on + strand, within H281DRAFT_05911 at 45.720 kb on + strand at 45.877 kb on + strand at 45.878 kb on - strand at 46.074 kb on + strand, within H281DRAFT_05912 at 46.207 kb on + strand, within H281DRAFT_05912 at 46.294 kb on - strand, within H281DRAFT_05912 at 46.551 kb on + strand at 46.552 kb on - strand at 46.552 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 44,557 - +0.4 44,625 - +0.1 44,639 - +1.1 44,639 - -2.4 44,657 - -0.1 44,803 - -0.0 44,844 + +0.3 44,845 - +0.2 45,194 + H281DRAFT_05910 0.62 -0.3 45,448 + H281DRAFT_05911 0.11 -1.0 45,472 + H281DRAFT_05911 0.19 -1.8 45,496 + H281DRAFT_05911 0.26 -0.7 45,497 - H281DRAFT_05911 0.27 +0.6 45,497 - H281DRAFT_05911 0.27 -0.9 45,521 + H281DRAFT_05911 0.34 -0.9 45,583 + H281DRAFT_05911 0.54 -1.5 45,720 + -0.7 45,877 + -1.6 45,878 - -0.1 46,074 + H281DRAFT_05912 0.35 +0.5 46,207 + H281DRAFT_05912 0.58 -0.5 46,294 - H281DRAFT_05912 0.73 -0.1 46,551 + +0.7 46,552 - +0.6 46,552 - +1.0
Or see this region's nucleotide sequence