Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05851 and H281DRAFT_05852 are separated by 238 nucleotides H281DRAFT_05852 and H281DRAFT_05853 are separated by 9 nucleotides H281DRAFT_05853 and H281DRAFT_05854 are separated by 141 nucleotides
H281DRAFT_05851: H281DRAFT_05851 - Protein N-acetyltransferase, RimJ/RimL family, at 131,496 to 132,164
_05851
H281DRAFT_05852: H281DRAFT_05852 - transcriptional regulator, TetR family, at 132,403 to 133,014
_05852
H281DRAFT_05853: H281DRAFT_05853 - Protein of unknown function, at 133,024 to 133,839
_05853
H281DRAFT_05854: H281DRAFT_05854 - ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE, at 133,981 to 135,069
_05854
Position (kb) 133
134 Strain fitness (log2 ratio) -2
-1
0
1 at 132.025 kb on - strand, within H281DRAFT_05851 at 132.025 kb on - strand, within H281DRAFT_05851 at 132.152 kb on + strand at 132.152 kb on + strand at 132.152 kb on + strand at 132.152 kb on + strand at 132.152 kb on + strand at 132.152 kb on + strand at 132.153 kb on - strand at 132.153 kb on - strand at 132.153 kb on - strand at 132.399 kb on + strand at 132.399 kb on + strand at 132.399 kb on + strand at 132.399 kb on + strand at 132.400 kb on - strand at 132.400 kb on - strand at 132.400 kb on - strand at 132.492 kb on + strand, within H281DRAFT_05852 at 132.576 kb on - strand, within H281DRAFT_05852 at 132.608 kb on - strand, within H281DRAFT_05852 at 132.659 kb on + strand, within H281DRAFT_05852 at 132.659 kb on + strand, within H281DRAFT_05852 at 132.660 kb on - strand, within H281DRAFT_05852 at 132.708 kb on - strand, within H281DRAFT_05852 at 132.819 kb on - strand, within H281DRAFT_05852 at 132.860 kb on + strand, within H281DRAFT_05852 at 132.860 kb on + strand, within H281DRAFT_05852 at 132.861 kb on - strand, within H281DRAFT_05852 at 132.861 kb on - strand, within H281DRAFT_05852 at 132.864 kb on - strand, within H281DRAFT_05852 at 132.864 kb on - strand, within H281DRAFT_05852 at 132.869 kb on + strand, within H281DRAFT_05852 at 133.026 kb on - strand at 133.521 kb on - strand at 133.521 kb on - strand, within H281DRAFT_05853 at 133.523 kb on + strand, within H281DRAFT_05853 at 133.524 kb on - strand, within H281DRAFT_05853 at 133.524 kb on - strand, within H281DRAFT_05853 at 133.524 kb on - strand, within H281DRAFT_05853 at 133.524 kb on - strand, within H281DRAFT_05853 at 133.610 kb on - strand, within H281DRAFT_05853 at 133.610 kb on - strand, within H281DRAFT_05853 at 133.923 kb on + strand at 133.923 kb on + strand at 133.928 kb on + strand at 133.928 kb on + strand at 133.929 kb on - strand at 133.929 kb on - strand at 133.995 kb on - strand at 134.002 kb on + strand at 134.003 kb on - strand at 134.079 kb on - strand at 134.079 kb on - strand at 134.528 kb on + strand, within H281DRAFT_05854 at 134.708 kb on + strand, within H281DRAFT_05854 at 134.708 kb on + strand, within H281DRAFT_05854 at 134.709 kb on - strand, within H281DRAFT_05854
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 132,025 - H281DRAFT_05851 0.79 +0.5 132,025 - H281DRAFT_05851 0.79 +0.2 132,152 + +0.3 132,152 + -1.1 132,152 + -1.5 132,152 + +0.1 132,152 + -1.0 132,152 + -0.7 132,153 - -0.2 132,153 - +0.1 132,153 - -0.3 132,399 + -0.3 132,399 + -1.3 132,399 + +0.2 132,399 + +1.1 132,400 - +0.2 132,400 - +1.2 132,400 - -0.6 132,492 + H281DRAFT_05852 0.15 -0.9 132,576 - H281DRAFT_05852 0.28 +0.8 132,608 - H281DRAFT_05852 0.33 -0.4 132,659 + H281DRAFT_05852 0.42 -1.9 132,659 + H281DRAFT_05852 0.42 -0.0 132,660 - H281DRAFT_05852 0.42 -0.4 132,708 - H281DRAFT_05852 0.50 +0.7 132,819 - H281DRAFT_05852 0.68 +0.0 132,860 + H281DRAFT_05852 0.75 -1.0 132,860 + H281DRAFT_05852 0.75 +1.0 132,861 - H281DRAFT_05852 0.75 -1.3 132,861 - H281DRAFT_05852 0.75 -1.0 132,864 - H281DRAFT_05852 0.75 -1.6 132,864 - H281DRAFT_05852 0.75 -1.3 132,869 + H281DRAFT_05852 0.76 -0.4 133,026 - -0.6 133,521 - +1.3 133,521 - H281DRAFT_05853 0.61 -1.7 133,523 + H281DRAFT_05853 0.61 -1.0 133,524 - H281DRAFT_05853 0.61 -1.8 133,524 - H281DRAFT_05853 0.61 -1.6 133,524 - H281DRAFT_05853 0.61 -0.1 133,524 - H281DRAFT_05853 0.61 -2.3 133,610 - H281DRAFT_05853 0.72 +0.2 133,610 - H281DRAFT_05853 0.72 -1.0 133,923 + -0.4 133,923 + +0.5 133,928 + +0.4 133,928 + -0.0 133,929 - +0.2 133,929 - +0.2 133,995 - -0.1 134,002 + +1.3 134,003 - +1.3 134,079 - -0.2 134,079 - -0.2 134,528 + H281DRAFT_05854 0.50 +0.8 134,708 + H281DRAFT_05854 0.67 -0.1 134,708 + H281DRAFT_05854 0.67 -1.0 134,709 - H281DRAFT_05854 0.67 -0.6
Or see this region's nucleotide sequence