Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05828 and H281DRAFT_05829 are separated by 193 nucleotides H281DRAFT_05829 and H281DRAFT_05830 are separated by 798 nucleotides
H281DRAFT_05828: H281DRAFT_05828 - Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), at 104,976 to 105,659
_05828
H281DRAFT_05829: H281DRAFT_05829 - hypothetical protein (DUF2242), at 105,853 to 106,545
_05829
H281DRAFT_05830: H281DRAFT_05830 - hypothetical protein, at 107,344 to 107,595
_05830
Position (kb)
105
106
107 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 104.884 kb on + strand at 104.884 kb on + strand at 104.884 kb on + strand at 104.885 kb on - strand at 104.885 kb on - strand at 104.921 kb on - strand at 104.926 kb on + strand at 104.972 kb on + strand at 104.974 kb on + strand at 105.000 kb on + strand at 105.000 kb on + strand at 105.000 kb on + strand at 105.000 kb on + strand at 105.000 kb on + strand at 105.001 kb on - strand at 105.001 kb on - strand at 105.017 kb on - strand at 105.027 kb on + strand at 105.093 kb on + strand at 105.140 kb on - strand, within H281DRAFT_05828 at 105.172 kb on - strand, within H281DRAFT_05828 at 105.366 kb on + strand, within H281DRAFT_05828 at 105.366 kb on + strand, within H281DRAFT_05828 at 105.366 kb on + strand, within H281DRAFT_05828 at 105.366 kb on + strand, within H281DRAFT_05828 at 105.367 kb on - strand, within H281DRAFT_05828 at 105.411 kb on + strand, within H281DRAFT_05828 at 105.411 kb on + strand, within H281DRAFT_05828 at 105.429 kb on + strand, within H281DRAFT_05828 at 105.429 kb on + strand, within H281DRAFT_05828 at 105.775 kb on + strand at 105.797 kb on + strand at 105.798 kb on - strand at 105.869 kb on + strand at 105.870 kb on - strand at 105.870 kb on - strand at 105.953 kb on + strand, within H281DRAFT_05829 at 105.953 kb on + strand, within H281DRAFT_05829 at 105.954 kb on - strand, within H281DRAFT_05829 at 105.977 kb on - strand, within H281DRAFT_05829 at 106.048 kb on + strand, within H281DRAFT_05829 at 106.048 kb on + strand, within H281DRAFT_05829 at 106.170 kb on + strand, within H281DRAFT_05829 at 106.171 kb on - strand, within H281DRAFT_05829 at 106.183 kb on + strand, within H281DRAFT_05829 at 106.183 kb on + strand, within H281DRAFT_05829 at 106.311 kb on + strand, within H281DRAFT_05829 at 106.312 kb on - strand, within H281DRAFT_05829 at 106.312 kb on - strand, within H281DRAFT_05829 at 106.339 kb on + strand, within H281DRAFT_05829 at 106.340 kb on - strand, within H281DRAFT_05829 at 106.340 kb on - strand, within H281DRAFT_05829 at 106.340 kb on - strand, within H281DRAFT_05829 at 106.340 kb on - strand, within H281DRAFT_05829 at 106.340 kb on - strand, within H281DRAFT_05829 at 106.340 kb on - strand, within H281DRAFT_05829 at 106.369 kb on + strand, within H281DRAFT_05829 at 106.369 kb on + strand, within H281DRAFT_05829 at 106.370 kb on - strand, within H281DRAFT_05829 at 106.536 kb on - strand at 106.536 kb on - strand at 106.536 kb on - strand at 106.536 kb on - strand at 106.538 kb on + strand at 106.539 kb on - strand at 106.539 kb on - strand at 106.539 kb on - strand at 106.637 kb on - strand at 106.637 kb on - strand at 106.637 kb on - strand at 106.637 kb on - strand at 106.640 kb on + strand at 106.640 kb on + strand at 106.640 kb on + strand at 106.647 kb on + strand at 106.647 kb on + strand at 106.649 kb on + strand at 106.649 kb on + strand at 106.649 kb on + strand at 106.649 kb on + strand at 106.650 kb on - strand at 106.650 kb on - strand at 106.650 kb on - strand at 106.650 kb on - strand at 106.650 kb on - strand at 106.653 kb on + strand at 106.653 kb on + strand at 106.653 kb on + strand at 106.653 kb on + strand at 106.653 kb on + strand at 106.653 kb on + strand at 106.653 kb on + strand at 106.653 kb on + strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.654 kb on - strand at 106.657 kb on + strand at 106.657 kb on + strand at 106.657 kb on + strand at 106.657 kb on + strand at 106.657 kb on + strand at 106.657 kb on + strand at 106.657 kb on + strand at 106.657 kb on + strand at 106.657 kb on + strand at 106.657 kb on + strand at 106.657 kb on + strand at 106.658 kb on - strand at 106.658 kb on - strand at 106.658 kb on - strand at 106.658 kb on - strand at 106.658 kb on - strand at 106.658 kb on - strand at 106.660 kb on + strand at 106.663 kb on + strand at 106.663 kb on + strand at 106.664 kb on - strand at 106.668 kb on - strand at 106.677 kb on + strand at 106.713 kb on - strand at 106.713 kb on - strand at 106.722 kb on + strand at 106.722 kb on + strand at 106.722 kb on + strand at 106.737 kb on - strand at 106.813 kb on - strand at 106.852 kb on + strand at 106.852 kb on + strand at 106.853 kb on - strand at 106.857 kb on + strand at 106.878 kb on - strand at 106.878 kb on - strand at 106.881 kb on + strand at 106.882 kb on - strand at 106.952 kb on - strand at 106.952 kb on - strand at 107.033 kb on + strand at 107.033 kb on + strand at 107.033 kb on + strand at 107.033 kb on + strand at 107.034 kb on - strand at 107.034 kb on - strand at 107.034 kb on - strand at 107.037 kb on + strand at 107.054 kb on + strand at 107.054 kb on + strand at 107.054 kb on + strand at 107.054 kb on + strand at 107.054 kb on + strand at 107.054 kb on + strand at 107.073 kb on + strand at 107.074 kb on - strand at 107.074 kb on - strand at 107.079 kb on + strand at 107.079 kb on + strand at 107.080 kb on - strand at 107.080 kb on - strand at 107.540 kb on + strand, within H281DRAFT_05830 at 107.540 kb on + strand, within H281DRAFT_05830
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 104,884 + +0.1 104,884 + -0.7 104,884 + +0.5 104,885 - +0.7 104,885 - +0.4 104,921 - +0.2 104,926 + +0.9 104,972 + +0.1 104,974 + -0.2 105,000 + +0.2 105,000 + -0.6 105,000 + -0.5 105,000 + -0.3 105,000 + -0.2 105,001 - -1.6 105,001 - -0.6 105,017 - +0.7 105,027 + -0.2 105,093 + +0.3 105,140 - H281DRAFT_05828 0.24 +0.1 105,172 - H281DRAFT_05828 0.29 +0.0 105,366 + H281DRAFT_05828 0.57 -0.3 105,366 + H281DRAFT_05828 0.57 +0.1 105,366 + H281DRAFT_05828 0.57 -0.6 105,366 + H281DRAFT_05828 0.57 +0.1 105,367 - H281DRAFT_05828 0.57 +0.4 105,411 + H281DRAFT_05828 0.64 -0.3 105,411 + H281DRAFT_05828 0.64 -0.3 105,429 + H281DRAFT_05828 0.66 -0.9 105,429 + H281DRAFT_05828 0.66 +0.3 105,775 + +0.3 105,797 + +0.4 105,798 - +0.1 105,869 + -0.0 105,870 - +1.5 105,870 - +0.3 105,953 + H281DRAFT_05829 0.14 -0.2 105,953 + H281DRAFT_05829 0.14 +1.2 105,954 - H281DRAFT_05829 0.15 -0.2 105,977 - H281DRAFT_05829 0.18 -0.6 106,048 + H281DRAFT_05829 0.28 -1.7 106,048 + H281DRAFT_05829 0.28 +0.7 106,170 + H281DRAFT_05829 0.46 +0.2 106,171 - H281DRAFT_05829 0.46 +1.9 106,183 + H281DRAFT_05829 0.48 +0.5 106,183 + H281DRAFT_05829 0.48 -0.8 106,311 + H281DRAFT_05829 0.66 +0.4 106,312 - H281DRAFT_05829 0.66 +0.9 106,312 - H281DRAFT_05829 0.66 +1.2 106,339 + H281DRAFT_05829 0.70 +0.2 106,340 - H281DRAFT_05829 0.70 -0.2 106,340 - H281DRAFT_05829 0.70 +0.1 106,340 - H281DRAFT_05829 0.70 +2.3 106,340 - H281DRAFT_05829 0.70 +1.0 106,340 - H281DRAFT_05829 0.70 -0.6 106,340 - H281DRAFT_05829 0.70 +2.0 106,369 + H281DRAFT_05829 0.74 -0.6 106,369 + H281DRAFT_05829 0.74 -1.2 106,370 - H281DRAFT_05829 0.75 -0.4 106,536 - +1.6 106,536 - +0.3 106,536 - +1.0 106,536 - +0.3 106,538 + -0.5 106,539 - +1.1 106,539 - -1.1 106,539 - +0.8 106,637 - +1.0 106,637 - +0.7 106,637 - +0.1 106,637 - -0.8 106,640 + +0.5 106,640 + -0.0 106,640 + +0.6 106,647 + +2.0 106,647 + -0.6 106,649 + +0.3 106,649 + +0.1 106,649 + -0.3 106,649 + +1.3 106,650 - -1.7 106,650 - +0.4 106,650 - +1.1 106,650 - -0.4 106,650 - +1.0 106,653 + +0.3 106,653 + +0.5 106,653 + +0.7 106,653 + +0.7 106,653 + -0.4 106,653 + +0.2 106,653 + +0.5 106,653 + +0.2 106,654 - -0.4 106,654 - +0.2 106,654 - +0.3 106,654 - +0.1 106,654 - -0.5 106,654 - +0.5 106,654 - +0.4 106,654 - +1.0 106,654 - -0.0 106,654 - -0.0 106,654 - +0.2 106,654 - -0.2 106,654 - -1.8 106,654 - -0.4 106,654 - +2.6 106,657 + +0.2 106,657 + +0.9 106,657 + +0.6 106,657 + -0.3 106,657 + -0.4 106,657 + +0.1 106,657 + +1.3 106,657 + -0.2 106,657 + +0.8 106,657 + +0.4 106,657 + +0.6 106,658 - -0.6 106,658 - +0.1 106,658 - +0.8 106,658 - -0.7 106,658 - -0.0 106,658 - +0.2 106,660 + +1.5 106,663 + +1.1 106,663 + +0.3 106,664 - -0.1 106,668 - +0.7 106,677 + +0.9 106,713 - +0.8 106,713 - +1.3 106,722 + +1.0 106,722 + -0.1 106,722 + +0.0 106,737 - +0.3 106,813 - -0.2 106,852 + -0.9 106,852 + +1.2 106,853 - +1.1 106,857 + -0.3 106,878 - +0.3 106,878 - -2.4 106,881 + -1.5 106,882 - +0.3 106,952 - +0.4 106,952 - -2.0 107,033 + +0.3 107,033 + +0.1 107,033 + +0.2 107,033 + -0.1 107,034 - -0.1 107,034 - +0.0 107,034 - +0.9 107,037 + +0.4 107,054 + +3.3 107,054 + +0.1 107,054 + +1.3 107,054 + +0.0 107,054 + +1.0 107,054 + +0.6 107,073 + +3.3 107,074 - -0.2 107,074 - +0.5 107,079 + +1.0 107,079 + -1.8 107,080 - -1.1 107,080 - +0.9 107,540 + H281DRAFT_05830 0.78 +1.4 107,540 + H281DRAFT_05830 0.78 -0.9
Or see this region's nucleotide sequence