Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05826 and H281DRAFT_05827 are separated by 140 nucleotides H281DRAFT_05827 and H281DRAFT_05828 are separated by 294 nucleotides
H281DRAFT_05826: H281DRAFT_05826 - glutamine--fructose-6-phosphate transaminase, at 102,463 to 104,280
_05826
H281DRAFT_05827: H281DRAFT_05827 - hypothetical protein, at 104,421 to 104,681
_05827
H281DRAFT_05828: H281DRAFT_05828 - Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), at 104,976 to 105,659
_05828
Position (kb) 104
105 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 104.278 kb on + strand at 104.278 kb on + strand at 104.279 kb on - strand at 104.307 kb on + strand at 104.307 kb on + strand at 104.308 kb on - strand at 104.308 kb on - strand at 104.308 kb on - strand at 104.308 kb on - strand at 104.317 kb on + strand at 104.318 kb on - strand at 104.318 kb on - strand at 104.342 kb on + strand at 104.342 kb on + strand at 104.343 kb on - strand at 104.343 kb on - strand at 104.343 kb on - strand at 104.343 kb on - strand at 104.345 kb on - strand at 104.345 kb on - strand at 104.345 kb on - strand at 104.347 kb on - strand at 104.347 kb on - strand at 104.468 kb on - strand, within H281DRAFT_05827 at 104.577 kb on + strand, within H281DRAFT_05827 at 104.622 kb on + strand, within H281DRAFT_05827 at 104.623 kb on - strand, within H281DRAFT_05827 at 104.623 kb on - strand, within H281DRAFT_05827 at 104.663 kb on + strand at 104.663 kb on + strand at 104.664 kb on - strand at 104.705 kb on + strand at 104.884 kb on + strand at 104.884 kb on + strand at 104.884 kb on + strand at 104.885 kb on - strand at 104.885 kb on - strand at 104.921 kb on - strand at 104.926 kb on + strand at 104.972 kb on + strand at 104.974 kb on + strand at 105.000 kb on + strand at 105.000 kb on + strand at 105.000 kb on + strand at 105.000 kb on + strand at 105.000 kb on + strand at 105.001 kb on - strand at 105.001 kb on - strand at 105.017 kb on - strand at 105.027 kb on + strand at 105.093 kb on + strand at 105.140 kb on - strand, within H281DRAFT_05828 at 105.172 kb on - strand, within H281DRAFT_05828 at 105.366 kb on + strand, within H281DRAFT_05828 at 105.366 kb on + strand, within H281DRAFT_05828 at 105.366 kb on + strand, within H281DRAFT_05828 at 105.366 kb on + strand, within H281DRAFT_05828 at 105.367 kb on - strand, within H281DRAFT_05828 at 105.411 kb on + strand, within H281DRAFT_05828 at 105.411 kb on + strand, within H281DRAFT_05828 at 105.429 kb on + strand, within H281DRAFT_05828 at 105.429 kb on + strand, within H281DRAFT_05828
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 104,278 + -0.6 104,278 + -0.5 104,279 - +0.4 104,307 + -1.1 104,307 + -0.3 104,308 - +0.1 104,308 - -0.1 104,308 - +0.8 104,308 - +0.1 104,317 + -0.0 104,318 - -1.2 104,318 - +0.3 104,342 + -0.5 104,342 + -0.8 104,343 - +0.5 104,343 - -0.7 104,343 - -0.2 104,343 - -0.4 104,345 - -0.0 104,345 - -0.4 104,345 - -0.2 104,347 - -1.9 104,347 - -0.2 104,468 - H281DRAFT_05827 0.18 +0.1 104,577 + H281DRAFT_05827 0.60 +3.2 104,622 + H281DRAFT_05827 0.77 -0.1 104,623 - H281DRAFT_05827 0.77 +0.0 104,623 - H281DRAFT_05827 0.77 -0.4 104,663 + +0.1 104,663 + +1.1 104,664 - +0.3 104,705 + -1.0 104,884 + +0.1 104,884 + -0.7 104,884 + +0.5 104,885 - +0.7 104,885 - +0.4 104,921 - +0.2 104,926 + +0.9 104,972 + +0.1 104,974 + -0.2 105,000 + +0.2 105,000 + -0.6 105,000 + -0.5 105,000 + -0.3 105,000 + -0.2 105,001 - -1.6 105,001 - -0.6 105,017 - +0.7 105,027 + -0.2 105,093 + +0.3 105,140 - H281DRAFT_05828 0.24 +0.1 105,172 - H281DRAFT_05828 0.29 +0.0 105,366 + H281DRAFT_05828 0.57 -0.3 105,366 + H281DRAFT_05828 0.57 +0.1 105,366 + H281DRAFT_05828 0.57 -0.6 105,366 + H281DRAFT_05828 0.57 +0.1 105,367 - H281DRAFT_05828 0.57 +0.4 105,411 + H281DRAFT_05828 0.64 -0.3 105,411 + H281DRAFT_05828 0.64 -0.3 105,429 + H281DRAFT_05828 0.66 -0.9 105,429 + H281DRAFT_05828 0.66 +0.3
Or see this region's nucleotide sequence