Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05351 and H281DRAFT_05352 are separated by 283 nucleotides H281DRAFT_05352 and H281DRAFT_05353 are separated by 2 nucleotides H281DRAFT_05353 and H281DRAFT_05354 are separated by 256 nucleotides
H281DRAFT_05351: H281DRAFT_05351 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 103,874 to 104,728
_05351
H281DRAFT_05352: H281DRAFT_05352 - serine/threonine-protein kinase HipA, at 105,012 to 106,352
_05352
H281DRAFT_05353: H281DRAFT_05353 - HTH-type transcriptional regulator / antitoxin HipB, at 106,355 to 106,609
_05353
H281DRAFT_05354: H281DRAFT_05354 - Glycine/D-amino acid oxidase (deaminating), at 106,866 to 108,206
_05354
Position (kb)
105
106
107 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 104.301 kb on + strand, within H281DRAFT_05351 at 104.313 kb on + strand, within H281DRAFT_05351 at 104.526 kb on + strand, within H281DRAFT_05351 at 104.728 kb on + strand at 104.728 kb on + strand at 104.728 kb on + strand at 104.729 kb on - strand at 104.729 kb on - strand at 104.782 kb on - strand at 104.819 kb on - strand at 104.840 kb on - strand at 104.871 kb on - strand at 104.928 kb on - strand at 105.124 kb on - strand at 105.124 kb on - strand at 105.124 kb on - strand at 105.203 kb on + strand, within H281DRAFT_05352 at 105.204 kb on - strand, within H281DRAFT_05352 at 105.204 kb on - strand, within H281DRAFT_05352 at 105.300 kb on - strand at 105.556 kb on + strand, within H281DRAFT_05352 at 105.694 kb on + strand, within H281DRAFT_05352 at 105.695 kb on - strand, within H281DRAFT_05352 at 105.705 kb on + strand, within H281DRAFT_05352 at 105.792 kb on - strand, within H281DRAFT_05352 at 105.990 kb on + strand, within H281DRAFT_05352 at 106.151 kb on - strand, within H281DRAFT_05352 at 106.252 kb on + strand at 106.412 kb on + strand, within H281DRAFT_05353 at 106.696 kb on - strand at 106.838 kb on + strand at 106.839 kb on - strand at 106.850 kb on + strand at 106.980 kb on + strand at 106.981 kb on - strand at 106.981 kb on - strand at 106.981 kb on - strand at 106.981 kb on - strand at 107.116 kb on + strand, within H281DRAFT_05354 at 107.116 kb on + strand, within H281DRAFT_05354 at 107.184 kb on + strand, within H281DRAFT_05354 at 107.185 kb on - strand, within H281DRAFT_05354 at 107.185 kb on - strand, within H281DRAFT_05354 at 107.265 kb on - strand, within H281DRAFT_05354 at 107.332 kb on - strand, within H281DRAFT_05354
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 104,301 + H281DRAFT_05351 0.50 +0.1 104,313 + H281DRAFT_05351 0.51 +1.1 104,526 + H281DRAFT_05351 0.76 -2.0 104,728 + +0.2 104,728 + +0.2 104,728 + +0.1 104,729 - +0.6 104,729 - +0.1 104,782 - +0.7 104,819 - +1.1 104,840 - +0.6 104,871 - +0.9 104,928 - +0.3 105,124 - -0.1 105,124 - +2.0 105,124 - +0.4 105,203 + H281DRAFT_05352 0.14 +0.7 105,204 - H281DRAFT_05352 0.14 +1.8 105,204 - H281DRAFT_05352 0.14 +1.9 105,300 - -1.8 105,556 + H281DRAFT_05352 0.41 -0.0 105,694 + H281DRAFT_05352 0.51 +1.4 105,695 - H281DRAFT_05352 0.51 +1.0 105,705 + H281DRAFT_05352 0.52 +0.4 105,792 - H281DRAFT_05352 0.58 -0.7 105,990 + H281DRAFT_05352 0.73 +1.2 106,151 - H281DRAFT_05352 0.85 +0.2 106,252 + +0.1 106,412 + H281DRAFT_05353 0.22 -1.5 106,696 - +0.9 106,838 + +1.1 106,839 - -2.0 106,850 + +0.7 106,980 + +0.4 106,981 - -0.4 106,981 - +0.3 106,981 - +3.4 106,981 - -2.2 107,116 + H281DRAFT_05354 0.19 +0.6 107,116 + H281DRAFT_05354 0.19 -0.2 107,184 + H281DRAFT_05354 0.24 +0.5 107,185 - H281DRAFT_05354 0.24 +0.1 107,185 - H281DRAFT_05354 0.24 +1.2 107,265 - H281DRAFT_05354 0.30 -0.9 107,332 - H281DRAFT_05354 0.35 +0.4
Or see this region's nucleotide sequence