Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05087 and H281DRAFT_05088 are separated by 54 nucleotides H281DRAFT_05088 and H281DRAFT_05089 are separated by 4 nucleotides H281DRAFT_05089 and H281DRAFT_05090 overlap by 4 nucleotides H281DRAFT_05090 and H281DRAFT_05091 are separated by 550 nucleotides H281DRAFT_05091 and H281DRAFT_05092 are separated by 96 nucleotides
H281DRAFT_05087: H281DRAFT_05087 - exodeoxyribonuclease V alpha subunit, at 30,679 to 33,003
_05087
H281DRAFT_05088: H281DRAFT_05088 - hypothetical protein, at 33,058 to 33,201
_05088
H281DRAFT_05089: H281DRAFT_05089 - ribosome-associated protein, at 33,206 to 33,610
_05089
H281DRAFT_05090: H281DRAFT_05090 - EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant), at 33,607 to 34,932
_05090
H281DRAFT_05091: H281DRAFT_05091 - Quinol monooxygenase YgiN, at 35,483 to 35,773
_05091
H281DRAFT_05092: H281DRAFT_05092 - hypothetical protein, at 35,870 to 36,127
_05092
Position (kb) 33
34
35 Strain fitness (log2 ratio) -2
-1
0
1 at 33.019 kb on - strand at 33.176 kb on - strand, within H281DRAFT_05088 at 33.176 kb on - strand, within H281DRAFT_05088 at 33.199 kb on + strand at 33.200 kb on - strand at 33.543 kb on + strand, within H281DRAFT_05089 at 33.544 kb on - strand, within H281DRAFT_05089 at 33.608 kb on + strand at 33.725 kb on + strand at 33.725 kb on + strand at 33.726 kb on - strand at 33.726 kb on - strand at 34.076 kb on + strand, within H281DRAFT_05090 at 34.501 kb on - strand, within H281DRAFT_05090 at 34.810 kb on - strand at 34.909 kb on - strand at 34.999 kb on + strand at 35.000 kb on - strand at 35.000 kb on - strand at 35.002 kb on + strand at 35.100 kb on + strand at 35.100 kb on + strand at 35.100 kb on + strand at 35.101 kb on - strand at 35.317 kb on + strand at 35.317 kb on + strand at 35.318 kb on - strand at 35.528 kb on + strand, within H281DRAFT_05091 at 35.708 kb on + strand, within H281DRAFT_05091 at 35.709 kb on - strand, within H281DRAFT_05091 at 35.771 kb on + strand at 35.771 kb on + strand at 35.771 kb on + strand at 35.772 kb on - strand at 35.871 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 33,019 - -0.6 33,176 - H281DRAFT_05088 0.82 +0.6 33,176 - H281DRAFT_05088 0.82 +0.0 33,199 + -2.4 33,200 - +0.7 33,543 + H281DRAFT_05089 0.83 -0.5 33,544 - H281DRAFT_05089 0.83 -1.0 33,608 + -1.4 33,725 + -0.3 33,725 + -0.4 33,726 - -0.8 33,726 - +0.1 34,076 + H281DRAFT_05090 0.35 -0.1 34,501 - H281DRAFT_05090 0.67 +0.8 34,810 - +0.8 34,909 - -2.3 34,999 + +0.2 35,000 - -2.2 35,000 - +1.1 35,002 + +0.8 35,100 + -1.0 35,100 + +0.4 35,100 + -0.4 35,101 - +0.6 35,317 + -1.0 35,317 + -0.6 35,318 - -1.5 35,528 + H281DRAFT_05091 0.15 +0.3 35,708 + H281DRAFT_05091 0.77 +0.1 35,709 - H281DRAFT_05091 0.78 -0.0 35,771 + -0.4 35,771 + -0.2 35,771 + -0.3 35,772 - +0.8 35,871 + -0.7
Or see this region's nucleotide sequence