Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05052 and H281DRAFT_05053 are separated by 94 nucleotides H281DRAFT_05053 and H281DRAFT_05054 are separated by 115 nucleotides H281DRAFT_05054 and H281DRAFT_05055 are separated by 340 nucleotides
H281DRAFT_05052: H281DRAFT_05052 - Predicted arabinose efflux permease, MFS family, at 242,785 to 243,963
_05052
H281DRAFT_05053: H281DRAFT_05053 - protein of unknown function (DUF3331), at 244,058 to 244,501
_05053
H281DRAFT_05054: H281DRAFT_05054 - Predicted periplasmic or secreted lipoprotein, at 244,617 to 245,000
_05054
H281DRAFT_05055: H281DRAFT_05055 - Signal transduction histidine kinase, at 245,341 to 246,396
_05055
Position (kb) 244
245
246 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 243.920 kb on - strand at 244.517 kb on - strand at 244.531 kb on + strand at 244.615 kb on + strand at 244.639 kb on - strand at 244.701 kb on - strand, within H281DRAFT_05054 at 244.939 kb on + strand, within H281DRAFT_05054 at 244.940 kb on - strand, within H281DRAFT_05054 at 245.041 kb on - strand at 245.042 kb on + strand at 245.043 kb on - strand at 245.075 kb on + strand at 245.076 kb on - strand at 245.076 kb on - strand at 245.076 kb on - strand at 245.095 kb on - strand at 245.097 kb on + strand at 245.145 kb on + strand at 245.499 kb on - strand, within H281DRAFT_05055 at 245.558 kb on - strand, within H281DRAFT_05055 at 245.953 kb on + strand, within H281DRAFT_05055 at 245.954 kb on - strand, within H281DRAFT_05055
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 243,920 - -0.1 244,517 - -2.4 244,531 + -1.9 244,615 + -0.7 244,639 - +1.5 244,701 - H281DRAFT_05054 0.22 -0.9 244,939 + H281DRAFT_05054 0.84 +0.6 244,940 - H281DRAFT_05054 0.84 -0.4 245,041 - -3.5 245,042 + -0.4 245,043 - -1.9 245,075 + -0.7 245,076 - -0.7 245,076 - -1.5 245,076 - -1.0 245,095 - -1.7 245,097 + -0.5 245,145 + -0.6 245,499 - H281DRAFT_05055 0.15 -0.9 245,558 - H281DRAFT_05055 0.21 -0.8 245,953 + H281DRAFT_05055 0.58 -1.0 245,954 - H281DRAFT_05055 0.58 -0.6
Or see this region's nucleotide sequence