Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04979 and H281DRAFT_04980 are separated by 228 nucleotides H281DRAFT_04980 and H281DRAFT_04981 are separated by 221 nucleotides H281DRAFT_04981 and H281DRAFT_04982 are separated by 273 nucleotides
H281DRAFT_04979: H281DRAFT_04979 - NitT/TauT family transport system substrate-binding protein, at 163,953 to 164,990
_04979
H281DRAFT_04980: H281DRAFT_04980 - hypothetical protein, at 165,219 to 165,596
_04980
H281DRAFT_04981: H281DRAFT_04981 - Protein of unknown function (DUF3563), at 165,818 to 165,964
_04981
H281DRAFT_04982: H281DRAFT_04982 - transcriptional regulator, MerR family, at 166,238 to 166,690
_04982
Position (kb) 165
166 Strain fitness (log2 ratio) -2
-1
0
1
2 at 164.274 kb on - strand, within H281DRAFT_04979 at 164.470 kb on - strand, within H281DRAFT_04979 at 164.470 kb on - strand, within H281DRAFT_04979 at 164.697 kb on + strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.849 kb on - strand, within H281DRAFT_04979 at 164.851 kb on + strand, within H281DRAFT_04979 at 165.008 kb on + strand at 165.008 kb on + strand at 165.009 kb on - strand at 165.009 kb on - strand at 165.009 kb on - strand at 165.195 kb on - strand at 165.266 kb on - strand, within H281DRAFT_04980 at 165.277 kb on + strand, within H281DRAFT_04980 at 165.328 kb on + strand, within H281DRAFT_04980 at 165.329 kb on - strand, within H281DRAFT_04980 at 165.329 kb on - strand, within H281DRAFT_04980 at 165.646 kb on + strand at 165.647 kb on - strand at 165.674 kb on + strand at 165.675 kb on - strand at 165.775 kb on - strand at 165.785 kb on + strand at 165.786 kb on - strand at 165.786 kb on - strand at 165.819 kb on + strand at 165.894 kb on + strand, within H281DRAFT_04981 at 165.894 kb on + strand, within H281DRAFT_04981 at 165.895 kb on - strand, within H281DRAFT_04981 at 165.895 kb on - strand, within H281DRAFT_04981 at 165.954 kb on + strand at 165.954 kb on + strand at 165.954 kb on + strand at 166.043 kb on + strand at 166.043 kb on + strand at 166.044 kb on - strand at 166.115 kb on + strand at 166.115 kb on + strand at 166.116 kb on - strand at 166.116 kb on - strand at 166.123 kb on + strand at 166.123 kb on + strand at 166.123 kb on + strand at 166.123 kb on + strand at 166.123 kb on + strand at 166.169 kb on + strand at 166.170 kb on - strand at 166.170 kb on - strand at 166.174 kb on - strand at 166.174 kb on - strand at 166.180 kb on + strand at 166.181 kb on - strand at 166.202 kb on + strand at 166.202 kb on + strand at 166.324 kb on + strand, within H281DRAFT_04982 at 166.390 kb on + strand, within H281DRAFT_04982 at 166.575 kb on + strand, within H281DRAFT_04982
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 164,274 - H281DRAFT_04979 0.31 +0.6 164,470 - H281DRAFT_04979 0.50 +0.3 164,470 - H281DRAFT_04979 0.50 -0.9 164,697 + H281DRAFT_04979 0.72 -0.2 164,698 - H281DRAFT_04979 0.72 -0.4 164,698 - H281DRAFT_04979 0.72 +0.4 164,698 - H281DRAFT_04979 0.72 -0.4 164,698 - H281DRAFT_04979 0.72 +0.7 164,698 - H281DRAFT_04979 0.72 -0.9 164,698 - H281DRAFT_04979 0.72 +0.9 164,698 - H281DRAFT_04979 0.72 -0.1 164,698 - H281DRAFT_04979 0.72 -1.6 164,849 - H281DRAFT_04979 0.86 -0.6 164,851 + H281DRAFT_04979 0.87 -0.0 165,008 + -0.1 165,008 + +0.3 165,009 - +0.1 165,009 - -1.5 165,009 - +0.2 165,195 - +1.5 165,266 - H281DRAFT_04980 0.12 -0.3 165,277 + H281DRAFT_04980 0.15 -0.1 165,328 + H281DRAFT_04980 0.29 -0.4 165,329 - H281DRAFT_04980 0.29 +1.6 165,329 - H281DRAFT_04980 0.29 +1.1 165,646 + +0.9 165,647 - -0.5 165,674 + +0.4 165,675 - +1.4 165,775 - +0.1 165,785 + -0.1 165,786 - -0.6 165,786 - -0.2 165,819 + -0.4 165,894 + H281DRAFT_04981 0.52 -0.4 165,894 + H281DRAFT_04981 0.52 -0.3 165,895 - H281DRAFT_04981 0.52 -0.2 165,895 - H281DRAFT_04981 0.52 -0.8 165,954 + -0.7 165,954 + +0.3 165,954 + -0.6 166,043 + -0.6 166,043 + -1.0 166,044 - -0.1 166,115 + -0.1 166,115 + -0.1 166,116 - -0.2 166,116 - -0.1 166,123 + +0.4 166,123 + -0.4 166,123 + -0.1 166,123 + -2.3 166,123 + +0.7 166,169 + -0.0 166,170 - -0.0 166,170 - -0.9 166,174 - +0.0 166,174 - -0.7 166,180 + -0.4 166,181 - +0.3 166,202 + +0.4 166,202 + +2.4 166,324 + H281DRAFT_04982 0.19 -1.5 166,390 + H281DRAFT_04982 0.34 -1.3 166,575 + H281DRAFT_04982 0.74 -0.2
Or see this region's nucleotide sequence