Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04819

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04818 and H281DRAFT_04819 are separated by 69 nucleotidesH281DRAFT_04819 and H281DRAFT_04820 are separated by 12 nucleotides H281DRAFT_04818: H281DRAFT_04818 - dihydroorotase, at 252,617 to 253,897 _04818 H281DRAFT_04819: H281DRAFT_04819 - lyso-ornithine lipid acyltransferase, at 253,967 to 254,806 _04819 H281DRAFT_04820: H281DRAFT_04820 - Bis(5'nucleosyl)-tetraphosphatase, ApaH, at 254,819 to 255,703 _04820 Position (kb) 253 254 255Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 252.981 kb on - strand, within H281DRAFT_04818at 252.981 kb on - strand, within H281DRAFT_04818at 253.093 kb on + strandat 253.133 kb on + strand, within H281DRAFT_04818at 253.134 kb on - strand, within H281DRAFT_04818at 253.139 kb on + strand, within H281DRAFT_04818at 253.140 kb on - strand, within H281DRAFT_04818at 253.140 kb on - strand, within H281DRAFT_04818at 253.169 kb on + strand, within H281DRAFT_04818at 253.264 kb on + strand, within H281DRAFT_04818at 253.265 kb on - strand, within H281DRAFT_04818at 253.265 kb on - strand, within H281DRAFT_04818at 253.265 kb on - strand, within H281DRAFT_04818at 253.755 kb on + strand, within H281DRAFT_04818at 253.756 kb on - strand, within H281DRAFT_04818at 253.814 kb on - strandat 254.131 kb on + strandat 254.132 kb on - strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.198 kb on + strand, within H281DRAFT_04819at 254.199 kb on - strand, within H281DRAFT_04819at 254.199 kb on - strand, within H281DRAFT_04819at 254.199 kb on - strand, within H281DRAFT_04819at 254.199 kb on - strand, within H281DRAFT_04819at 254.199 kb on - strand, within H281DRAFT_04819at 254.199 kb on - strand, within H281DRAFT_04819at 254.199 kb on - strand, within H281DRAFT_04819at 254.290 kb on + strand, within H281DRAFT_04819at 254.437 kb on + strand, within H281DRAFT_04819at 254.438 kb on - strand, within H281DRAFT_04819at 254.438 kb on - strand, within H281DRAFT_04819at 254.438 kb on - strand, within H281DRAFT_04819at 254.481 kb on + strand, within H281DRAFT_04819at 254.492 kb on + strand, within H281DRAFT_04819at 254.492 kb on + strand, within H281DRAFT_04819at 254.492 kb on + strand, within H281DRAFT_04819at 254.492 kb on + strand, within H281DRAFT_04819at 254.531 kb on + strand, within H281DRAFT_04819at 254.531 kb on + strand, within H281DRAFT_04819at 254.531 kb on + strand, within H281DRAFT_04819at 254.531 kb on + strand, within H281DRAFT_04819at 254.531 kb on + strand, within H281DRAFT_04819at 254.531 kb on + strand, within H281DRAFT_04819at 254.531 kb on + strand, within H281DRAFT_04819at 254.532 kb on - strand, within H281DRAFT_04819at 254.532 kb on - strand, within H281DRAFT_04819at 254.532 kb on - strand, within H281DRAFT_04819at 254.532 kb on - strand, within H281DRAFT_04819at 254.603 kb on + strand, within H281DRAFT_04819at 254.603 kb on + strand, within H281DRAFT_04819at 254.603 kb on + strand, within H281DRAFT_04819at 254.603 kb on + strand, within H281DRAFT_04819at 254.603 kb on + strand, within H281DRAFT_04819at 254.603 kb on + strand, within H281DRAFT_04819at 254.604 kb on - strand, within H281DRAFT_04819at 254.604 kb on - strand, within H281DRAFT_04819at 254.641 kb on + strand, within H281DRAFT_04819at 254.641 kb on + strand, within H281DRAFT_04819at 254.641 kb on + strand, within H281DRAFT_04819at 254.804 kb on + strandat 254.820 kb on + strandat 254.820 kb on + strandat 254.821 kb on - strandat 254.821 kb on - strandat 254.821 kb on - strandat 255.177 kb on - strand, within H281DRAFT_04820at 255.195 kb on + strand, within H281DRAFT_04820at 255.328 kb on - strand, within H281DRAFT_04820at 255.784 kb on + strandat 255.784 kb on + strandat 255.784 kb on + strandat 255.784 kb on + strandat 255.784 kb on + strandat 255.784 kb on + strandat 255.787 kb on + strandat 255.787 kb on + strandat 255.787 kb on + strandat 255.788 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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252,981 - H281DRAFT_04818 0.28 -0.9
252,981 - H281DRAFT_04818 0.28 +0.1
253,093 + -0.5
253,133 + H281DRAFT_04818 0.40 -0.3
253,134 - H281DRAFT_04818 0.40 +0.8
253,139 + H281DRAFT_04818 0.41 -2.6
253,140 - H281DRAFT_04818 0.41 +1.1
253,140 - H281DRAFT_04818 0.41 -0.0
253,169 + H281DRAFT_04818 0.43 +0.3
253,264 + H281DRAFT_04818 0.51 +0.3
253,265 - H281DRAFT_04818 0.51 -0.1
253,265 - H281DRAFT_04818 0.51 -0.2
253,265 - H281DRAFT_04818 0.51 -0.1
253,755 + H281DRAFT_04818 0.89 +0.6
253,756 - H281DRAFT_04818 0.89 +0.2
253,814 - +0.2
254,131 + +2.1
254,132 - H281DRAFT_04819 0.20 -1.2
254,198 + H281DRAFT_04819 0.28 -0.9
254,198 + H281DRAFT_04819 0.28 -0.4
254,198 + H281DRAFT_04819 0.28 -1.4
254,198 + H281DRAFT_04819 0.28 +1.7
254,198 + H281DRAFT_04819 0.28 -0.4
254,198 + H281DRAFT_04819 0.28 -0.7
254,198 + H281DRAFT_04819 0.28 -2.0
254,198 + H281DRAFT_04819 0.28 +0.5
254,198 + H281DRAFT_04819 0.28 -1.1
254,198 + H281DRAFT_04819 0.28 -1.9
254,198 + H281DRAFT_04819 0.28 -0.6
254,198 + H281DRAFT_04819 0.28 -0.0
254,198 + H281DRAFT_04819 0.28 -2.1
254,199 - H281DRAFT_04819 0.28 -0.6
254,199 - H281DRAFT_04819 0.28 -1.9
254,199 - H281DRAFT_04819 0.28 -0.5
254,199 - H281DRAFT_04819 0.28 +0.9
254,199 - H281DRAFT_04819 0.28 -0.1
254,199 - H281DRAFT_04819 0.28 -0.8
254,199 - H281DRAFT_04819 0.28 -0.7
254,290 + H281DRAFT_04819 0.38 -1.1
254,437 + H281DRAFT_04819 0.56 -0.1
254,438 - H281DRAFT_04819 0.56 -0.1
254,438 - H281DRAFT_04819 0.56 +0.1
254,438 - H281DRAFT_04819 0.56 +1.1
254,481 + H281DRAFT_04819 0.61 -0.8
254,492 + H281DRAFT_04819 0.62 -0.6
254,492 + H281DRAFT_04819 0.62 -0.1
254,492 + H281DRAFT_04819 0.62 -1.9
254,492 + H281DRAFT_04819 0.62 -1.3
254,531 + H281DRAFT_04819 0.67 -0.9
254,531 + H281DRAFT_04819 0.67 -0.1
254,531 + H281DRAFT_04819 0.67 -0.7
254,531 + H281DRAFT_04819 0.67 -3.5
254,531 + H281DRAFT_04819 0.67 +0.3
254,531 + H281DRAFT_04819 0.67 -0.4
254,531 + H281DRAFT_04819 0.67 +0.2
254,532 - H281DRAFT_04819 0.67 -0.1
254,532 - H281DRAFT_04819 0.67 -0.0
254,532 - H281DRAFT_04819 0.67 +1.3
254,532 - H281DRAFT_04819 0.67 +0.4
254,603 + H281DRAFT_04819 0.76 -1.3
254,603 + H281DRAFT_04819 0.76 +0.0
254,603 + H281DRAFT_04819 0.76 -0.3
254,603 + H281DRAFT_04819 0.76 -0.7
254,603 + H281DRAFT_04819 0.76 -0.5
254,603 + H281DRAFT_04819 0.76 -0.0
254,604 - H281DRAFT_04819 0.76 +0.2
254,604 - H281DRAFT_04819 0.76 -0.6
254,641 + H281DRAFT_04819 0.80 +0.2
254,641 + H281DRAFT_04819 0.80 -0.5
254,641 + H281DRAFT_04819 0.80 -0.2
254,804 + +0.3
254,820 + +0.1
254,820 + -0.1
254,821 - -0.4
254,821 - +2.7
254,821 - -0.2
255,177 - H281DRAFT_04820 0.40 -0.8
255,195 + H281DRAFT_04820 0.42 -0.2
255,328 - H281DRAFT_04820 0.58 +0.1
255,784 + +0.7
255,784 + +0.5
255,784 + -0.6
255,784 + +0.2
255,784 + -0.1
255,784 + -0.3
255,787 + +0.5
255,787 + +0.7
255,787 + -0.4
255,788 - -0.1

Or see this region's nucleotide sequence