Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04794

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04793 and H281DRAFT_04794 are separated by 75 nucleotidesH281DRAFT_04794 and H281DRAFT_04795 overlap by 7 nucleotides H281DRAFT_04793: H281DRAFT_04793 - Glycosyltransferase, at 221,134 to 222,075 _04793 H281DRAFT_04794: H281DRAFT_04794 - Glycosyltransferase involved in cell wall bisynthesis, at 222,151 to 223,083 _04794 H281DRAFT_04795: H281DRAFT_04795 - hypothetical protein, at 223,077 to 224,231 _04795 Position (kb) 222 223 224Strain fitness (log2 ratio) -2 -1 0 1at 221.153 kb on + strandat 221.302 kb on + strand, within H281DRAFT_04793at 222.040 kb on - strandat 222.289 kb on + strand, within H281DRAFT_04794at 222.290 kb on - strand, within H281DRAFT_04794at 222.380 kb on - strand, within H281DRAFT_04794at 222.382 kb on - strand, within H281DRAFT_04794at 222.465 kb on - strand, within H281DRAFT_04794at 222.663 kb on - strand, within H281DRAFT_04794at 222.814 kb on - strand, within H281DRAFT_04794at 223.202 kb on - strand, within H281DRAFT_04795at 223.202 kb on - strand, within H281DRAFT_04795at 223.206 kb on + strand, within H281DRAFT_04795at 223.461 kb on - strand, within H281DRAFT_04795at 223.490 kb on + strand, within H281DRAFT_04795at 223.491 kb on - strand, within H281DRAFT_04795at 223.897 kb on + strand, within H281DRAFT_04795at 223.898 kb on - strand, within H281DRAFT_04795at 223.988 kb on + strand, within H281DRAFT_04795

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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221,153 + -0.9
221,302 + H281DRAFT_04793 0.18 -1.0
222,040 - +0.2
222,289 + H281DRAFT_04794 0.15 +0.9
222,290 - H281DRAFT_04794 0.15 -2.2
222,380 - H281DRAFT_04794 0.25 -1.4
222,382 - H281DRAFT_04794 0.25 -1.1
222,465 - H281DRAFT_04794 0.34 +1.2
222,663 - H281DRAFT_04794 0.55 -0.9
222,814 - H281DRAFT_04794 0.71 +0.9
223,202 - H281DRAFT_04795 0.11 +1.7
223,202 - H281DRAFT_04795 0.11 -0.4
223,206 + H281DRAFT_04795 0.11 -0.2
223,461 - H281DRAFT_04795 0.33 +1.0
223,490 + H281DRAFT_04795 0.36 +0.7
223,491 - H281DRAFT_04795 0.36 +0.2
223,897 + H281DRAFT_04795 0.71 -0.2
223,898 - H281DRAFT_04795 0.71 +0.6
223,988 + H281DRAFT_04795 0.79 -0.0

Or see this region's nucleotide sequence