Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04737 and H281DRAFT_04738 are separated by 94 nucleotides H281DRAFT_04738 and H281DRAFT_04739 are separated by 102 nucleotides H281DRAFT_04739 and H281DRAFT_04740 are separated by 322 nucleotides
H281DRAFT_04737: H281DRAFT_04737 - glutaryl-CoA dehydrogenase, at 144,707 to 145,897
_04737
H281DRAFT_04738: H281DRAFT_04738 - transcriptional regulator, IclR family, at 145,992 to 146,777
_04738
H281DRAFT_04739: H281DRAFT_04739 - EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant), at 146,880 to 147,713
_04739
H281DRAFT_04740: H281DRAFT_04740 - MFS transporter, AAHS family, 4-hydroxybenzoate transporter, at 148,036 to 149,400
_04740
Position (kb) 146
147
148 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 145.902 kb on + strand at 145.902 kb on + strand at 145.902 kb on + strand at 145.903 kb on - strand at 145.984 kb on - strand at 146.164 kb on - strand, within H281DRAFT_04738 at 146.165 kb on + strand, within H281DRAFT_04738 at 146.184 kb on + strand, within H281DRAFT_04738 at 146.317 kb on + strand, within H281DRAFT_04738 at 146.318 kb on - strand, within H281DRAFT_04738 at 146.364 kb on + strand, within H281DRAFT_04738 at 146.365 kb on - strand, within H281DRAFT_04738 at 146.457 kb on + strand, within H281DRAFT_04738 at 146.457 kb on + strand, within H281DRAFT_04738 at 146.458 kb on - strand, within H281DRAFT_04738 at 146.593 kb on - strand, within H281DRAFT_04738 at 146.876 kb on + strand at 146.876 kb on + strand at 146.876 kb on + strand at 146.877 kb on - strand at 146.900 kb on - strand at 146.942 kb on - strand at 146.942 kb on - strand at 147.152 kb on - strand, within H281DRAFT_04739 at 147.161 kb on - strand, within H281DRAFT_04739 at 147.191 kb on + strand, within H281DRAFT_04739 at 147.226 kb on - strand, within H281DRAFT_04739 at 147.287 kb on - strand, within H281DRAFT_04739 at 147.315 kb on + strand, within H281DRAFT_04739 at 147.322 kb on - strand, within H281DRAFT_04739 at 147.327 kb on + strand, within H281DRAFT_04739 at 147.441 kb on - strand, within H281DRAFT_04739 at 147.715 kb on + strand at 147.728 kb on - strand at 147.733 kb on - strand at 147.733 kb on - strand at 147.790 kb on + strand at 147.791 kb on - strand at 147.791 kb on - strand at 147.791 kb on - strand at 147.893 kb on + strand at 147.932 kb on + strand at 148.016 kb on + strand at 148.016 kb on + strand at 148.016 kb on + strand at 148.065 kb on + strand at 148.186 kb on + strand, within H281DRAFT_04740 at 148.187 kb on - strand, within H281DRAFT_04740 at 148.187 kb on - strand, within H281DRAFT_04740 at 148.187 kb on - strand, within H281DRAFT_04740 at 148.460 kb on + strand, within H281DRAFT_04740 at 148.673 kb on + strand, within H281DRAFT_04740 at 148.673 kb on + strand, within H281DRAFT_04740 at 148.674 kb on - strand, within H281DRAFT_04740
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 145,902 + +0.4 145,902 + -0.8 145,902 + -0.5 145,903 - +2.4 145,984 - -0.4 146,164 - H281DRAFT_04738 0.22 -0.1 146,165 + H281DRAFT_04738 0.22 -1.0 146,184 + H281DRAFT_04738 0.24 +0.5 146,317 + H281DRAFT_04738 0.41 -0.4 146,318 - H281DRAFT_04738 0.41 -1.3 146,364 + H281DRAFT_04738 0.47 +0.8 146,365 - H281DRAFT_04738 0.47 +0.5 146,457 + H281DRAFT_04738 0.59 +1.0 146,457 + H281DRAFT_04738 0.59 +0.4 146,458 - H281DRAFT_04738 0.59 -0.4 146,593 - H281DRAFT_04738 0.76 +0.7 146,876 + -0.6 146,876 + -0.8 146,876 + +1.5 146,877 - -0.8 146,900 - +0.3 146,942 - -0.2 146,942 - +0.5 147,152 - H281DRAFT_04739 0.33 +0.3 147,161 - H281DRAFT_04739 0.34 +0.7 147,191 + H281DRAFT_04739 0.37 -1.8 147,226 - H281DRAFT_04739 0.41 +1.2 147,287 - H281DRAFT_04739 0.49 -0.3 147,315 + H281DRAFT_04739 0.52 +0.8 147,322 - H281DRAFT_04739 0.53 -2.4 147,327 + H281DRAFT_04739 0.54 +0.1 147,441 - H281DRAFT_04739 0.67 +0.5 147,715 + +0.1 147,728 - +0.1 147,733 - -1.1 147,733 - +0.4 147,790 + +0.6 147,791 - +0.2 147,791 - -0.8 147,791 - -0.4 147,893 + -1.0 147,932 + +0.2 148,016 + -0.8 148,016 + +0.7 148,016 + -1.0 148,065 + -0.8 148,186 + H281DRAFT_04740 0.11 -0.9 148,187 - H281DRAFT_04740 0.11 -0.1 148,187 - H281DRAFT_04740 0.11 +0.3 148,187 - H281DRAFT_04740 0.11 -0.1 148,460 + H281DRAFT_04740 0.31 -0.1 148,673 + H281DRAFT_04740 0.47 +3.7 148,673 + H281DRAFT_04740 0.47 +0.3 148,674 - H281DRAFT_04740 0.47 -0.2
Or see this region's nucleotide sequence